RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 PPP1R3GB7ZBB8 358 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 HNRNPDLO14979 420 aaKnown RBP8.54□□□□□ -1.04
CDH1-208ENST00000565810 EVI5O60447 810 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 PPP1R37O75864 691 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 FGFR1OPO95684 399 aaKnown RBP8.54□□□□□ -1.04
CDH1-208ENST00000565810 IQCF3P0C7M6 154 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 GHRP10912 638 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 RAG1P15918 1043 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 ZSCAN20P17040 1043 aaPredicted RBP8.54□□□□□ -1.04
CDH1-208ENST00000565810 BMP6P22004 513 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 CCNE1P24864 410 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 ERCC5P28715 1186 aaPredicted RBP8.54□□□□□ -1.04
CDH1-208ENST00000565810 AXLP30530 894 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 MATR3P43243 847 aaKnown RBP eCLIP8.54□□□□□ -1.04
CDH1-208ENST00000565810 CASP5P51878 434 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 ZNF445P59923 1031 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 NFX1Q12986 1120 aaKnown RBP8.54□□□□□ -1.04
CDH1-208ENST00000565810 PAK2Q13177 524 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 HSP90AA2PQ14568 343 aaPredicted RBP8.54□□□□□ -1.04
CDH1-208ENST00000565810 TPD52L1Q16890 204 aaPredicted RBP8.54□□□□□ -1.04
CDH1-208ENST00000565810 DPCR1Q3MIW9 517 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 ANO6Q4KMQ2 910 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 FBXO47Q5MNV8 452 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 SLFN12LQ6IEE8 588 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 ZPBP2Q6X784 338 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 PPP4R3CPQ6ZMV5 832 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 FAM43BQ6ZT52 329 aaPredicted RBP8.54□□□□□ -1.04
CDH1-208ENST00000565810 NELFBQ8WX92 580 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 DPF3Q92784 378 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 ADPGKQ9BRR6 497 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 TCHPQ9BT92 498 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 NOC4LQ9BVI4 516 aaKnown RBP8.54□□□□□ -1.04
CDH1-208ENST00000565810 STRA6Q9BX79 667 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 FGFBP2Q9BYJ0 223 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 TSPY26PQ9H489 355 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 CDHR5Q9HBB8 845 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 TYW1Q9NV66 732 aaKnown RBP8.54□□□□□ -1.04
CDH1-208ENST00000565810 TBX21Q9UL17 535 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 ST3GAL5Q9UNP4 418 aa8.54□□□□□ -1.04
CDH1-208ENST00000565810 NOC2LQ9Y3T9 749 aaKnown RBP8.54□□□□□ -1.04
CDH1-208ENST00000565810 MKI67P46013 3256 aaKnown RBP8.53□□□□□ -1.04
CDH1-208ENST00000565810 SMTNL1A8MU46 457 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 BECN2A8MW95 431 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 PDXKO00764 312 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 N4BP3O15049 544 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 KIAA0355O15063 1070 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 CLDN3O15551 220 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 CSDE1O75534 798 aaKnown RBP8.53□□□□□ -1.04
CDH1-208ENST00000565810 TOM1L1O75674 476 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 TIMP1P01033 207 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 CD44P16070 742 aaKnown RBP8.53□□□□□ -1.04
CDH1-208ENST00000565810 FGFR4P22455 802 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 RPL13P26373 211 aaKnown RBP8.53□□□□□ -1.04
CDH1-208ENST00000565810 RFC2P35250 354 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 CCL23P55773 120 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 LRRC63Q05C16 580 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 ATF7IP2Q5U623 682 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 CENPPQ6IPU0 288 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 ARMCX5Q6P1M9 558 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 NOTUMQ6P988 496 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 TSHZ1Q6ZSZ6 1077 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 FAM228AQ86W67 206 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 RPUSD2Q8IZ73 545 aaKnown RBP8.53□□□□□ -1.04
CDH1-208ENST00000565810 TMEM199Q8N511 208 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 GLIS3Q8NEA6 775 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 SEPT8Q92599 483 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 P2RX5Q93086 422 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 CCDC51Q96ER9 411 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 ACO2Q99798 780 aaKnown RBP8.53□□□□□ -1.04
CDH1-208ENST00000565810 FUCA2Q9BTY2 467 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 TARS2Q9BW92 718 aaKnown RBP8.53□□□□□ -1.04
CDH1-208ENST00000565810 FTHL17Q9BXU8 183 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 CCDC113Q9H0I3 377 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 DNAJC25Q9H1X3 360 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 MINDY3Q9H8M7 445 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 CHST12Q9NRB3 414 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 RWDD2AQ9UIY3 292 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 PADI3Q9ULW8 664 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 CTNND2Q9UQB3 1225 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 PIN4Q9Y237 131 aaKnown RBP8.53□□□□□ -1.04
CDH1-208ENST00000565810 DNAH12Q6ZR08 3092 aa8.53□□□□□ -1.04
CDH1-208ENST00000565810 MYH9P35579 1960 aaKnown RBP8.52□□□□□ -1.05
CDH1-208ENST00000565810 KIAA0100Q14667 2235 aaKnown RBP8.52□□□□□ -1.05
CDH1-208ENST00000565810 A0A1B0GUA9 196 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 KIAA0391O15091 583 aaKnown RBP8.52□□□□□ -1.05
CDH1-208ENST00000565810 CETN3O15182 167 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 CLIC2O15247 247 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 TSPAN1O60635 241 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 LDHAP00338 332 aaKnown RBP8.52□□□□□ -1.05
CDH1-208ENST00000565810 PIGRP01833 764 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 ARF4P18085 180 aaPredicted RBP8.52□□□□□ -1.05
CDH1-208ENST00000565810 GARTP22102 1010 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 CD52P31358 61 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 CYP2C18P33260 490 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 ZNF165P49910 485 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 STX17P56962 302 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 TPM4P67936 248 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 FKBP3Q00688 224 aaKnown RBP8.52□□□□□ -1.05
CDH1-208ENST00000565810 KCNA1Q09470 495 aa8.52□□□□□ -1.05
CDH1-208ENST00000565810 ADAM9Q13443 819 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms