RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 FOXD4L6Q3SYB3 417 aaPredicted RBP20.66■□□□□ 0.9
CMTM3-210ENST00000565666 NAALADL2Q58DX5 795 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 UBXN11Q5T124 520 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 FOXD4L3Q6VB84 417 aaPredicted RBP20.66■□□□□ 0.9
CMTM3-210ENST00000565666 KLHL23Q8NBE8 558 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 CNNM3Q8NE01 707 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 PRIMPOLQ96LW4 560 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 KIFC3Q9BVG8 833 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 CCSER1Q9C0I3 900 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 LMAN2LQ9H0V9 348 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 ALG13Q9NP73 1137 aaKnown RBP20.66■□□□□ 0.9
CMTM3-210ENST00000565666 CCDC39Q9UFE4 941 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 INPP5FQ9Y2H2 1132 aa20.66■□□□□ 0.9
CMTM3-210ENST00000565666 MEIS3P2A8K0S8 358 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 GRM6O15303 877 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 CSPG5O95196 566 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 GUCY2CP25092 1073 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 NASPP49321 788 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-210ENST00000565666 EFNA5P52803 228 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 SLC12A3P55017 1021 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 PEX3P56589 373 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 DMP1Q13316 513 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-210ENST00000565666 CSPP1Q1MSJ5 1256 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 PPP4R3CPQ6ZMV5 832 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 CDR2LQ86X02 465 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-210ENST00000565666 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.65■□□□□ 0.9
CMTM3-210ENST00000565666 KRI1Q8N9T8 703 aaKnown RBP20.65■□□□□ 0.9
CMTM3-210ENST00000565666 COLGALT1Q8NBJ5 622 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 RSPH1Q8WYR4 309 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 SYMPKQ92797 1274 aaKnown RBP20.65■□□□□ 0.9
CMTM3-210ENST00000565666 EPSTI1Q96J88 318 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 CLIC6Q96NY7 704 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 EIF2AQ9BY44 585 aaKnown RBP20.65■□□□□ 0.9
CMTM3-210ENST00000565666 FZD8Q9H461 694 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 CWH43Q9H720 699 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 RSAD1Q9HA92 442 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 KCND2Q9NZV8 630 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 TFIP11Q9UBB9 837 aaKnown RBP20.65■□□□□ 0.9
CMTM3-210ENST00000565666 CDH23Q9H251 3354 aa20.65■□□□□ 0.9
CMTM3-210ENST00000565666 CNTNAP2Q9UHC6 1331 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 ITGB1P05556 798 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 ITGA4P13612 1032 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 NCLP19338 710 aaKnown RBP20.64■□□□□ 0.89
CMTM3-210ENST00000565666 MAPK7Q13164 816 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 PRPF4BQ13523 1007 aaKnown RBP20.64■□□□□ 0.89
CMTM3-210ENST00000565666 BECN1Q14457 450 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 FAM187BQ17R55 369 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 TIGD5Q53EQ6 642 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 NOMO2Q5JPE7 1267 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 SLC27A1Q6PCB7 646 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 LRRC55Q6ZSA7 311 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 MRPL10Q7Z7H8 261 aaKnown RBP20.64■□□□□ 0.89
CMTM3-210ENST00000565666 GPBP1Q86WP2 473 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 THNSL1Q8IYQ7 743 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 HACE1Q8IYU2 909 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 DAW1Q8N136 415 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 URGCPQ8TCY9 931 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 PRDM6Q9NQX0 595 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 PLAGL2Q9UPG8 496 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 IPPQ9Y573 584 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 MORC2Q9Y6X9 1032 aaPredicted RBP20.64■□□□□ 0.89
CMTM3-210ENST00000565666 MYH11P35749 1972 aa20.64■□□□□ 0.89
CMTM3-210ENST00000565666 PRRC2BQ5JSZ5 2229 aaKnown RBP20.63■□□□□ 0.89
CMTM3-210ENST00000565666 PLXNA4Q9HCM2 1894 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 SFI1A8K8P3 1242 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 K7ERI5 159 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 N4BP3O15049 544 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 SPTLC2O15270 562 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 NPTXRO95502 500 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 NPTX2P47972 431 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 RNASELQ05823 741 aaKnown RBP20.63■□□□□ 0.89
CMTM3-210ENST00000565666 PKP1Q13835 747 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 AGMOQ6ZNB7 445 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 USP49Q70CQ1 688 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 LINC00301Q8NCQ3 95 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 SMG8Q8ND04 991 aaKnown RBP20.63■□□□□ 0.89
CMTM3-210ENST00000565666 LARP4BQ92615 738 aaKnown RBP20.63■□□□□ 0.89
CMTM3-210ENST00000565666 RAD54LQ92698 747 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 ZNF558Q96NG5 402 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 APOL6Q9BWW8 343 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 CCDC113Q9H0I3 377 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 C17orf75Q9HAS0 396 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 KMT5AQ9NQR1 393 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 BLOC1S4Q9NUP1 217 aa20.63■□□□□ 0.89
CMTM3-210ENST00000565666 DAXXQ9UER7 740 aaPredicted RBP20.63■□□□□ 0.89
CMTM3-210ENST00000565666 PHLPP2Q6ZVD8 1323 aa20.62■□□□□ 0.89
CMTM3-210ENST00000565666 A0A1B0GUA9 196 aa20.62■□□□□ 0.89
CMTM3-210ENST00000565666 ACKR2O00590 384 aa20.62■□□□□ 0.89
CMTM3-210ENST00000565666 OFD1O75665 1012 aa20.62■□□□□ 0.89
CMTM3-210ENST00000565666 KRT18P05783 430 aaKnown RBP20.62■□□□□ 0.89
CMTM3-210ENST00000565666 CACNB1Q02641 598 aaPredicted RBP20.62■□□□□ 0.89
CMTM3-210ENST00000565666 MCM6Q14566 821 aa20.62■□□□□ 0.89
CMTM3-210ENST00000565666 KCNT2Q6UVM3 1135 aa20.62■□□□□ 0.89
CMTM3-210ENST00000565666 ADPGKQ9BRR6 497 aa20.62■□□□□ 0.89
CMTM3-210ENST00000565666 UBN1Q9NPG3 1134 aa20.62■□□□□ 0.89
CMTM3-210ENST00000565666 THEGQ9P2T0 379 aa20.62■□□□□ 0.89
CMTM3-210ENST00000565666 HES2Q9Y543 173 aa20.62■□□□□ 0.89
CMTM3-210ENST00000565666 TRANK1O15050 2925 aa20.61■□□□□ 0.89
CMTM3-210ENST00000565666 NPHP3-ACAD11A0A0J9YXS1 232 aa20.61■□□□□ 0.89
CMTM3-210ENST00000565666 ZC3H11AO75152 810 aaKnown RBP eCLIP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms