RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 NASPP49321 788 aaPredicted RBP10.98□□□□□ -0.65
CDH1-206ENST00000564676 PEX3P56589 373 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 RAD51AP2Q09MP3 1159 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 DMP1Q13316 513 aaPredicted RBP10.98□□□□□ -0.65
CDH1-206ENST00000564676 PKP1Q13835 747 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 DHX8Q14562 1220 aaKnown RBP10.98□□□□□ -0.65
CDH1-206ENST00000564676 MAPK6Q16659 721 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 PTPROQ16827 1216 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 CLLU1OSQ5K130 101 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 CDCA2Q69YH5 1023 aaPredicted RBP10.98□□□□□ -0.65
CDH1-206ENST00000564676 KRI1Q8N9T8 703 aaKnown RBP10.98□□□□□ -0.65
CDH1-206ENST00000564676 LINC00301Q8NCQ3 95 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 HELQQ8TDG4 1101 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 SYMPKQ92797 1274 aaKnown RBP10.98□□□□□ -0.65
CDH1-206ENST00000564676 LPPQ93052 612 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 CCDC51Q96ER9 411 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 EPSTI1Q96J88 318 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 DRC1Q96MC2 740 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 CASD1Q96PB1 797 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 C11orf84Q9BUA3 381 aaPredicted RBP10.98□□□□□ -0.65
CDH1-206ENST00000564676 KIFC3Q9BVG8 833 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 TIPINQ9BVW5 301 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 TRAIPQ9BWF2 469 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 PLVAPQ9BX97 442 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 TRIM6Q9C030 488 aaPredicted RBP10.98□□□□□ -0.65
CDH1-206ENST00000564676 RNF19AQ9NV58 838 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 TYW1Q9NV66 732 aaKnown RBP10.98□□□□□ -0.65
CDH1-206ENST00000564676 PRMT7Q9NVM4 692 aaPredicted RBP10.98□□□□□ -0.65
CDH1-206ENST00000564676 LMCD1Q9NZU5 365 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 DAXXQ9UER7 740 aaPredicted RBP10.98□□□□□ -0.65
CDH1-206ENST00000564676 CCDC39Q9UFE4 941 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 PCDHB12Q9Y5F1 795 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 MYO7AQ13402 2215 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 SFI1A8K8P3 1242 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 C5orf67F2Z3F1 127 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 SPTLC2O15270 562 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 B4GALT5O43286 388 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 PRKCBP05771 671 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 KRT18P05783 430 aaKnown RBP10.97□□□□□ -0.65
CDH1-206ENST00000564676 LINC00271P0C7V0 271 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 POU3F3P20264 500 aaPredicted RBP10.97□□□□□ -0.65
CDH1-206ENST00000564676 GUCY2CP25092 1073 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 TIE1P35590 1138 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 SLC12A3P55017 1021 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 PRPF4BQ13523 1007 aaKnown RBP10.97□□□□□ -0.65
CDH1-206ENST00000564676 MCM6Q14566 821 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 SKIV2LQ15477 1246 aaKnown RBP10.97□□□□□ -0.65
CDH1-206ENST00000564676 AMHR2Q16671 573 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 UBXN11Q5T124 520 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 GLB1LQ6UWU2 654 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 USP49Q70CQ1 688 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 GPBP1Q86WP2 473 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 LRRC43Q8N309 656 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 CNNM3Q8NE01 707 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 PRIMPOLQ96LW4 560 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 FZD8Q9H461 694 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 C17orf75Q9HAS0 396 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 KCND2Q9NZV8 630 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 KCNG1Q9UIX4 513 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 INPP5FQ9Y2H2 1132 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 MORC2Q9Y6X9 1032 aaPredicted RBP10.97□□□□□ -0.65
CDH1-206ENST00000564676 COL4A6Q14031 1691 aa10.97□□□□□ -0.65
CDH1-206ENST00000564676 RALGAPA2Q2PPJ7 1873 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 NPHP3-ACAD11A0A0J9YXS1 232 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 K7ERI5 159 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 ACKR2O00590 384 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 GRM6O15303 877 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 OFD1O75665 1012 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 CSPG5O95196 566 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 YEATS4O95619 227 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 ITGA4P13612 1032 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 LAG3P18627 525 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 NCLP19338 710 aaKnown RBP10.96□□□□□ -0.65
CDH1-206ENST00000564676 NPTX2P47972 431 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 EFNA5P52803 228 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 FAM187BQ17R55 369 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 NAALADL2Q58DX5 795 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 RRAGBQ5VZM2 374 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 ATL3Q6DD88 541 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 CCDC73Q6ZRK6 1079 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 LRRC55Q6ZSA7 311 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 MRPL10Q7Z7H8 261 aaKnown RBP10.96□□□□□ -0.65
CDH1-206ENST00000564676 CDR2LQ86X02 465 aaPredicted RBP10.96□□□□□ -0.65
CDH1-206ENST00000564676 THNSL1Q8IYQ7 743 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 HACE1Q8IYU2 909 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 DAW1Q8N136 415 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 KLHL23Q8NBE8 558 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 SLC17A8Q8NDX2 589 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 URGCPQ8TCY9 931 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 RAD54LQ92698 747 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 P2RX5Q93086 422 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 APOL6Q9BWW8 343 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 EIF2AQ9BY44 585 aaKnown RBP10.96□□□□□ -0.65
CDH1-206ENST00000564676 MRPL9Q9BYD2 267 aaKnown RBP10.96□□□□□ -0.65
CDH1-206ENST00000564676 PANK2Q9BZ23 570 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 CWH43Q9H720 699 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 RSAD1Q9HA92 442 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 ALG13Q9NP73 1137 aaKnown RBP10.96□□□□□ -0.65
CDH1-206ENST00000564676 KMT5AQ9NQR1 393 aa10.96□□□□□ -0.65
CDH1-206ENST00000564676 BLOC1S4Q9NUP1 217 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms