RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 AHI1Q8N157 1196 aa4.38□□□□□ -1.71
CHD9-211ENST00000564600 MSL3Q8N5Y2 521 aaKnown RBP4.38□□□□□ -1.71
CHD9-211ENST00000564600 OR2W6PQ8NHA6 318 aa4.38□□□□□ -1.71
CHD9-211ENST00000564600 LPPQ93052 612 aa4.38□□□□□ -1.71
CHD9-211ENST00000564600 WDR26Q9H7D7 661 aa4.38□□□□□ -1.71
CHD9-211ENST00000564600 EDARQ9UNE0 448 aa4.38□□□□□ -1.71
CHD9-211ENST00000564600 GOLGA8BA8MQT2 603 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 FAM20BO75063 409 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 LY86O95711 162 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 MANFP55145 182 aaKnown RBP4.37□□□□□ -1.71
CHD9-211ENST00000564600 PURAQ00577 322 aaKnown RBP4.37□□□□□ -1.71
CHD9-211ENST00000564600 SART3Q15020 963 aaKnown RBP4.37□□□□□ -1.71
CHD9-211ENST00000564600 DDB1Q16531 1140 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 FAM214AQ32MH5 1076 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 GAGE13Q4V321 117 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 PITRM1Q5JRX3 1037 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 GPR158Q5T848 1215 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 C1QL3Q5VWW1 255 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 FAM111BQ6SJ93 734 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 VRK3Q8IV63 474 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 PASD1Q8IV76 773 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 ELOA2Q8IYF1 753 aaPredicted RBP4.37□□□□□ -1.71
CHD9-211ENST00000564600 SLC5A5Q92911 643 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 MSL2Q9HCI7 577 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 VTA1Q9NP79 307 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 TOPORSQ9NS56 1045 aaPredicted RBP4.37□□□□□ -1.71
CHD9-211ENST00000564600 GPRC5BQ9NZH0 403 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 NCDNQ9UBB6 729 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 EVLQ9UI08 416 aaPredicted RBP4.37□□□□□ -1.71
CHD9-211ENST00000564600 MAPRE3Q9UPY8 281 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 GIT1Q9Y2X7 761 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 PCDHB6Q9Y5E3 794 aa4.37□□□□□ -1.71
CHD9-211ENST00000564600 FOXN1O15353 648 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 KDM1AO60341 852 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 SEC24DO94855 1032 aaPredicted RBP4.36□□□□□ -1.71
CHD9-211ENST00000564600 LPLP06858 475 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 LSP1P33241 339 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 RABGGTBP53611 331 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 STRN3Q13033 797 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 ELAVL1Q15717 326 aaKnown RBP4.36□□□□□ -1.71
CHD9-211ENST00000564600 ATP13A4Q4VNC1 1196 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 CT83Q5H943 113 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 KRT40Q6A162 431 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 CCDC62Q6P9F0 684 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 TMPRSS6Q8IU80 811 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 CLRN3Q8NCR9 226 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 GAB3Q8WWW8 586 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 FERMT2Q96AC1 680 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 PGBD4Q96DM1 585 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 HIST1H2AHQ96KK5 128 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 HIST1H2AJQ99878 128 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 TCF25Q9BQ70 676 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 FAM126AQ9BYI3 521 aaPredicted RBP4.36□□□□□ -1.71
CHD9-211ENST00000564600 OSBPL6Q9BZF3 934 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 ENKD1Q9H0I2 346 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 USP36Q9P275 1121 aaKnown RBP4.36□□□□□ -1.71
CHD9-211ENST00000564600 PRSS50Q9UI38 385 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 RCAN3Q9UKA8 241 aa4.36□□□□□ -1.71
CHD9-211ENST00000564600 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 DAPK3O43293 454 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 ALDH1A2O94788 518 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 JUNP05412 331 aaKnown RBP4.35□□□□□ -1.71
CHD9-211ENST00000564600 CASRP41180 1078 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 FKBP15Q5T1M5 1219 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 LAIR1Q6GTX8 287 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 SDE2Q6IQ49 451 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 LHFPL2Q6ZUX7 228 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 CMTM4Q8IZR5 234 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 CDYL2Q8N8U2 506 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 ZNF512Q96ME7 567 aaPredicted RBP4.35□□□□□ -1.71
CHD9-211ENST00000564600 UIMC1Q96RL1 719 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 MPHOSPH9Q99550 1183 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 NRDE2Q9H7Z3 1164 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 C14orf93Q9H972 538 aaKnown RBP4.35□□□□□ -1.71
CHD9-211ENST00000564600 SYNPO2Q9UMS6 1093 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 NUMBLQ9Y6R0 609 aa4.35□□□□□ -1.71
CHD9-211ENST00000564600 A0A1W2PR48 441 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 KLRG2A4D1S0 409 aaPredicted RBP4.34□□□□□ -1.71
CHD9-211ENST00000564600 TMEM127O75204 238 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 PROZP22891 400 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 MASP1P48740 699 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 OCRLQ01968 901 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 HHEXQ03014 270 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 PPARAQ07869 468 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 MGAT5Q09328 741 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 SPIDRQ14159 915 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 DHCR24Q15392 516 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 CSRP2Q16527 193 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 ABHD15Q6UXT9 468 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 FRMD7Q6ZUT3 714 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 RASSF3Q86WH2 238 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 ULK2Q8IYT8 1036 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 UNC5BQ8IZJ1 945 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 LILRA3Q8N6C8 439 aaPredicted RBP4.34□□□□□ -1.71
CHD9-211ENST00000564600 MB21D1Q8N884 522 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 MIEF2Q96C03 454 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 EAF2Q96CJ1 260 aaPredicted RBP4.34□□□□□ -1.71
CHD9-211ENST00000564600 ZNF703Q9H7S9 590 aaPredicted RBP4.34□□□□□ -1.71
CHD9-211ENST00000564600 PARPBPQ9NWS1 579 aa4.34□□□□□ -1.71
CHD9-211ENST00000564600 XDHP47989 1333 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms