RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 SPTLC2O15270 562 aa22.4■■□□□ 1.18
CMTM3-206ENST00000563672 PPP6R2O75170 966 aa22.4■■□□□ 1.18
CMTM3-206ENST00000563672 YEATS4O95619 227 aa22.4■■□□□ 1.18
CMTM3-206ENST00000563672 NPTX2P47972 431 aa22.4■■□□□ 1.18
CMTM3-206ENST00000563672 BECN1Q14457 450 aa22.4■■□□□ 1.18
CMTM3-206ENST00000563672 NAALADL2Q58DX5 795 aa22.4■■□□□ 1.18
CMTM3-206ENST00000563672 ABI1Q8IZP0 508 aa22.4■■□□□ 1.18
CMTM3-206ENST00000563672 SMG8Q8ND04 991 aaKnown RBP22.4■■□□□ 1.18
CMTM3-206ENST00000563672 RSPH1Q8WYR4 309 aa22.4■■□□□ 1.18
CMTM3-206ENST00000563672 RAD54LQ92698 747 aa22.4■■□□□ 1.18
CMTM3-206ENST00000563672 P2RX5Q93086 422 aa22.4■■□□□ 1.18
CMTM3-206ENST00000563672 PGBD4Q96DM1 585 aa22.4■■□□□ 1.18
CMTM3-206ENST00000563672 C11orf84Q9BUA3 381 aaPredicted RBP22.4■■□□□ 1.18
CMTM3-206ENST00000563672 KIFC3Q9BVG8 833 aa22.4■■□□□ 1.18
CMTM3-206ENST00000563672 EIF2AQ9BY44 585 aaKnown RBP22.4■■□□□ 1.18
CMTM3-206ENST00000563672 HCSTQ9UBK5 93 aa22.4■■□□□ 1.18
CMTM3-206ENST00000563672 ZDHHC9Q9Y397 364 aa22.4■■□□□ 1.18
CMTM3-206ENST00000563672 CNTNAP2Q9UHC6 1331 aa22.39■■□□□ 1.18
CMTM3-206ENST00000563672 ACKR2O00590 384 aa22.39■■□□□ 1.17
CMTM3-206ENST00000563672 BRD1O95696 1058 aa22.39■■□□□ 1.17
CMTM3-206ENST00000563672 NCLP19338 710 aaKnown RBP22.39■■□□□ 1.17
CMTM3-206ENST00000563672 DDIT3P35638 169 aa22.39■■□□□ 1.17
CMTM3-206ENST00000563672 EFNA5P52803 228 aa22.39■■□□□ 1.17
CMTM3-206ENST00000563672 PEX3P56589 373 aa22.39■■□□□ 1.17
CMTM3-206ENST00000563672 MAPK6Q16659 721 aa22.39■■□□□ 1.17
CMTM3-206ENST00000563672 LONRF3Q496Y0 759 aa22.39■■□□□ 1.17
CMTM3-206ENST00000563672 ATL3Q6DD88 541 aa22.39■■□□□ 1.17
CMTM3-206ENST00000563672 AGMOQ6ZNB7 445 aa22.39■■□□□ 1.17
CMTM3-206ENST00000563672 CNNM3Q8NE01 707 aa22.39■■□□□ 1.17
CMTM3-206ENST00000563672 RASSF8Q8NHQ8 419 aa22.39■■□□□ 1.17
CMTM3-206ENST00000563672 NTPCRQ9BSD7 190 aaKnown RBP22.39■■□□□ 1.17
CMTM3-206ENST00000563672 PLAGL2Q9UPG8 496 aa22.39■■□□□ 1.17
CMTM3-206ENST00000563672 FNDC1Q4ZHG4 1894 aaPredicted RBP22.39■■□□□ 1.17
CMTM3-206ENST00000563672 TTLL13PA6NNM8 815 aa22.38■■□□□ 1.17
CMTM3-206ENST00000563672 SFI1A8K8P3 1242 aa22.38■■□□□ 1.17
CMTM3-206ENST00000563672 OFD1O75665 1012 aa22.38■■□□□ 1.17
CMTM3-206ENST00000563672 PRKCBP05771 671 aa22.38■■□□□ 1.17
CMTM3-206ENST00000563672 RAD51AP2Q09MP3 1159 aa22.38■■□□□ 1.17
CMTM3-206ENST00000563672 DMP1Q13316 513 aaPredicted RBP22.38■■□□□ 1.17
CMTM3-206ENST00000563672 MCM6Q14566 821 aa22.38■■□□□ 1.17
CMTM3-206ENST00000563672 CCDC85BQ15834 202 aaPredicted RBP22.38■■□□□ 1.17
CMTM3-206ENST00000563672 FOXD4L6Q3SYB3 417 aaPredicted RBP22.38■■□□□ 1.17
CMTM3-206ENST00000563672 GLB1LQ6UWU2 654 aa22.38■■□□□ 1.17
CMTM3-206ENST00000563672 FOXD4L3Q6VB84 417 aaPredicted RBP22.38■■□□□ 1.17
CMTM3-206ENST00000563672 GPBP1Q86WP2 473 aa22.38■■□□□ 1.17
CMTM3-206ENST00000563672 LRRC43Q8N309 656 aa22.38■■□□□ 1.17
CMTM3-206ENST00000563672 PPM1EQ8WY54 764 aa22.38■■□□□ 1.17
CMTM3-206ENST00000563672 LARP4BQ92615 738 aaKnown RBP22.38■■□□□ 1.17
CMTM3-206ENST00000563672 MRPL38Q96DV4 380 aaKnown RBP22.38■■□□□ 1.17
CMTM3-206ENST00000563672 CCDC39Q9UFE4 941 aa22.38■■□□□ 1.17
CMTM3-206ENST00000563672 IPPQ9Y573 584 aa22.38■■□□□ 1.17
CMTM3-206ENST00000563672 RALGAPA2Q2PPJ7 1873 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 COL4A4P53420 1690 aaPredicted RBP22.37■■□□□ 1.17
CMTM3-206ENST00000563672 NPHP3-ACAD11A0A0J9YXS1 232 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 CCDC169A6NNP5 214 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 GRM6O15303 877 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 EDN1P05305 212 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 PLS3P13797 630 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 TXLNAP40222 546 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 PRPF4BQ13523 1007 aaKnown RBP22.37■■□□□ 1.17
CMTM3-206ENST00000563672 PTPROQ16827 1216 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 SPOUT1Q5T280 376 aaKnown RBP22.37■■□□□ 1.17
CMTM3-206ENST00000563672 SLC27A1Q6PCB7 646 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 KLHL23Q8NBE8 558 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 COLGALT1Q8NBJ5 622 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 SPIRE2Q8WWL2 714 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 MRPL9Q9BYD2 267 aaKnown RBP22.37■■□□□ 1.17
CMTM3-206ENST00000563672 AAASQ9NRG9 546 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 ARHGAP28Q9P2N2 729 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 STK17AQ9UEE5 414 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 KCNG1Q9UIX4 513 aa22.37■■□□□ 1.17
CMTM3-206ENST00000563672 RBM19Q9Y4C8 960 aaKnown RBP22.37■■□□□ 1.17
CMTM3-206ENST00000563672 PRUNE2Q8WUY3 3088 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 K7ERI5 159 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 ITGB1P05556 798 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 LAG3P18627 525 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 DNM1Q05193 864 aaKnown RBP22.36■■□□□ 1.17
CMTM3-206ENST00000563672 DHX8Q14562 1220 aaKnown RBP22.36■■□□□ 1.17
CMTM3-206ENST00000563672 NOMO2Q5JPE7 1267 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 RRAGBQ5VZM2 374 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 CDR2LQ86X02 465 aaPredicted RBP22.36■■□□□ 1.17
CMTM3-206ENST00000563672 MICALL1Q8N3F8 863 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 SPPL3Q8TCT6 385 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 LMAN2LQ9H0V9 348 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 RNF39Q9H2S5 420 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 PDZD7Q9H5P4 517 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 TMEM134Q9H6X4 195 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 RSAD1Q9HA92 442 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 ALG13Q9NP73 1137 aaKnown RBP22.36■■□□□ 1.17
CMTM3-206ENST00000563672 UBN1Q9NPG3 1134 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 KMT5AQ9NQR1 393 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 DAXXQ9UER7 740 aaPredicted RBP22.36■■□□□ 1.17
CMTM3-206ENST00000563672 ODF2LQ9ULJ1 636 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 USP20Q9Y2K6 914 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 PCDHB12Q9Y5F1 795 aa22.36■■□□□ 1.17
CMTM3-206ENST00000563672 NLRC5Q86WI3 1866 aa22.35■■□□□ 1.17
CMTM3-206ENST00000563672 ITGA4P13612 1032 aa22.35■■□□□ 1.17
CMTM3-206ENST00000563672 CACNB1Q02641 598 aaPredicted RBP22.35■■□□□ 1.17
CMTM3-206ENST00000563672 CAMK1Q14012 370 aa22.35■■□□□ 1.17
CMTM3-206ENST00000563672 GIT2Q14161 759 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms