RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 HERC6Q8IVU3 1022 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 TOP1MTQ969P6 601 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 FIZ1Q96SL8 496 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 REEP2Q9BRK0 252 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 KIFC3Q9BVG8 833 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 FTHL17Q9BXU8 183 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 PBX4Q9BYU1 374 aa16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 YBX2Q9Y2T7 364 aaKnown RBP16.28■□□□□ 0.2
SCAMP2-203ENST00000563663 TTLL13PA6NNM8 815 aa16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 BECN2A8MW95 431 aa16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 GPR182O15218 404 aa16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 GJB5O95377 273 aa16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 NAMPTP43490 491 aa16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 RABGGTBP53611 331 aa16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 C11orf57Q6ZUT1 292 aaPredicted RBP16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 TAS1R3Q7RTX0 852 aa16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 GPBP1Q86WP2 473 aa16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 PDILTQ8N807 584 aa16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 KIFAP3Q92845 792 aa16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 MTIF3Q9H2K0 278 aaKnown RBP16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 RGS18Q9NS28 235 aa16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 AGPAT5Q9NUQ2 364 aa16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 KIAA1671Q9BY89 1806 aa16.27■□□□□ 0.2
SCAMP2-203ENST00000563663 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 MYMKA6NI61 221 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 TSPAN1O60635 241 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 MYOGP15173 224 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 PFKFB1P16118 471 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 ATF7P17544 494 aaPredicted RBP16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 NPTX2P47972 431 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 FAM189BP81408 668 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 HTRA4P83105 476 aaPredicted RBP16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 RAD51AP2Q09MP3 1159 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 GIT2Q14161 759 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 RRAGBQ5VZM2 374 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 FAM43BQ6ZT52 329 aaPredicted RBP16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 DHX40Q8IX18 779 aaKnown RBP16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 KCNN1Q92952 543 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 DNAJC19Q96DA6 116 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 ADAM2Q99965 735 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 TIPINQ9BVW5 301 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 TRAIPQ9BWF2 469 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 KBTBD4Q9NVX7 518 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 ARHGAP28Q9P2N2 729 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 SFI1A8K8P3 1242 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 SSBP05455 408 aaKnown RBP eCLIP16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 TXLNAP40222 546 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 PHKA2P46019 1235 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 NLRP12P59046 1061 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 ZNF830Q96NB3 372 aaPredicted RBP16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 SCLT1Q96NL6 688 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 NTPCRQ9BSD7 190 aaKnown RBP16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 FZD8Q9H461 694 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 RNF19AQ9NV58 838 aa16.26■□□□□ 0.19
SCAMP2-203ENST00000563663 LCHNA4D1U4 455 aa16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 B4GALT5O43286 388 aa16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 LINC00271P0C7V0 271 aa16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 SFPQP23246 707 aaKnown RBP eCLIP16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 STAT6P42226 847 aa16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 SYKP43405 635 aa16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 TFDP1Q14186 410 aa16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 DHX8Q14562 1220 aaKnown RBP16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 FAM187BQ17R55 369 aa16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 UBXN11Q5T124 520 aa16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 PPP4R3CPQ6ZMV5 832 aa16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 ZNF598Q86UK7 904 aaKnown RBP16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 MYOCDQ8IZQ8 938 aa16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 KCNF1Q9H3M0 494 aa16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 ODF2LQ9ULJ1 636 aa16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 NLRC5Q86WI3 1866 aa16.25■□□□□ 0.19
SCAMP2-203ENST00000563663 SPTBN5Q9NRC6 3674 aaKnown RBP16.24■□□□□ 0.19
SCAMP2-203ENST00000563663 FRMD3A2A2Y4 597 aa16.24■□□□□ 0.19
SCAMP2-203ENST00000563663 LRRIQ4A6NIV6 560 aa16.24■□□□□ 0.19
SCAMP2-203ENST00000563663 ACTN4O43707 911 aaKnown RBP16.24■□□□□ 0.19
SCAMP2-203ENST00000563663 DNAJB2P25686 324 aa16.24■□□□□ 0.19
SCAMP2-203ENST00000563663 KCNJ6P48051 423 aa16.24■□□□□ 0.19
SCAMP2-203ENST00000563663 PEX3P56589 373 aa16.24■□□□□ 0.19
SCAMP2-203ENST00000563663 SPRED2Q7Z698 418 aa16.24■□□□□ 0.19
SCAMP2-203ENST00000563663 RASSF8Q8NHQ8 419 aa16.24■□□□□ 0.19
SCAMP2-203ENST00000563663 SP7Q8TDD2 431 aaPredicted RBP16.24■□□□□ 0.19
SCAMP2-203ENST00000563663 PRIMPOLQ96LW4 560 aa16.24■□□□□ 0.19
SCAMP2-203ENST00000563663 DRC1Q96MC2 740 aa16.24■□□□□ 0.19
SCAMP2-203ENST00000563663 INO80BQ9C086 356 aaPredicted RBP16.24■□□□□ 0.19
SCAMP2-203ENST00000563663 C17orf75Q9HAS0 396 aa16.24■□□□□ 0.19
SCAMP2-203ENST00000563663 SMTNL1A8MU46 457 aa16.23■□□□□ 0.19
SCAMP2-203ENST00000563663 POLR2DO15514 142 aaKnown RBP16.23■□□□□ 0.19
SCAMP2-203ENST00000563663 AMHP03971 560 aa16.23■□□□□ 0.19
SCAMP2-203ENST00000563663 PLS3P13797 630 aa16.23■□□□□ 0.19
SCAMP2-203ENST00000563663 ARF4P18085 180 aaPredicted RBP16.23■□□□□ 0.19
SCAMP2-203ENST00000563663 SARSP49591 514 aaKnown RBP16.23■□□□□ 0.19
SCAMP2-203ENST00000563663 PCBP1Q15365 356 aaKnown RBP eCLIP16.23■□□□□ 0.196e-9■■■■■ 51
SCAMP2-203ENST00000563663 SLC24A5Q71RS6 500 aa16.23■□□□□ 0.19
SCAMP2-203ENST00000563663 SPC24Q8NBT2 197 aa16.23■□□□□ 0.19
SCAMP2-203ENST00000563663 TMEM161BQ8NDZ6 487 aa16.23■□□□□ 0.19
SCAMP2-203ENST00000563663 SPIRE2Q8WWL2 714 aa16.23■□□□□ 0.19
SCAMP2-203ENST00000563663 DHX58Q96C10 678 aa16.23■□□□□ 0.19
SCAMP2-203ENST00000563663 ZNF689Q96CS4 500 aaPredicted RBP16.23■□□□□ 0.19
SCAMP2-203ENST00000563663 TTYH1Q9H313 450 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms