RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 PPP2R5AQ15172 486 aa31.28■■■□□ 2.6
NME3-203ENST00000563367 PPP4R3CPQ6ZMV5 832 aa31.28■■■□□ 2.6
NME3-203ENST00000563367 CDR2LQ86X02 465 aaPredicted RBP31.28■■■□□ 2.6
NME3-203ENST00000563367 SPRYD3Q8NCJ5 442 aa31.28■■■□□ 2.6
NME3-203ENST00000563367 PGBD4Q96DM1 585 aa31.28■■■□□ 2.6
NME3-203ENST00000563367 CCDC51Q96ER9 411 aa31.28■■■□□ 2.6
NME3-203ENST00000563367 USP28Q96RU2 1077 aa31.28■■■□□ 2.6
NME3-203ENST00000563367 CSRNP2Q9H175 543 aa31.28■■■□□ 2.6
NME3-203ENST00000563367 TTLL13PA6NNM8 815 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 HIP1RO75146 1068 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 SSBP05455 408 aaKnown RBP eCLIP31.27■■■□□ 2.6
NME3-203ENST00000563367 NCLP19338 710 aaKnown RBP31.27■■■□□ 2.6
NME3-203ENST00000563367 PBX3P40426 434 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 FAM187BQ17R55 369 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 TIGD5Q53EQ6 642 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 TCEAL5Q5H9L2 206 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 GLB1LQ6UWU2 654 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 KCTD17Q8N5Z5 321 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 SYT2Q8N9I0 419 aaPredicted RBP31.27■■■□□ 2.6
NME3-203ENST00000563367 DEPTORQ8TB45 409 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 POF1BQ8WVV4 589 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 IFT74Q96LB3 600 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 CCDC113Q9H0I3 377 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 C2orf40Q9H1Z8 148 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 PRMT7Q9NVM4 692 aaPredicted RBP31.27■■■□□ 2.6
NME3-203ENST00000563367 FBXO2Q9UK22 296 aaPredicted RBP31.27■■■□□ 2.6
NME3-203ENST00000563367 INPP5FQ9Y2H2 1132 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 IPPQ9Y573 584 aa31.27■■■□□ 2.6
NME3-203ENST00000563367 A0A1B0GUA9 196 aa31.26■■■□□ 2.59
NME3-203ENST00000563367 SLC26A4O43511 780 aa31.26■■■□□ 2.59
NME3-203ENST00000563367 PLA2G4BP0C869 781 aa31.26■■■□□ 2.59
NME3-203ENST00000563367 AFF1P51825 1210 aaKnown RBP31.26■■■□□ 2.59
NME3-203ENST00000563367 SLC12A3P55017 1021 aa31.26■■■□□ 2.59
NME3-203ENST00000563367 TFF2Q03403 129 aa31.26■■■□□ 2.59
NME3-203ENST00000563367 MAPK7Q13164 816 aa31.26■■■□□ 2.59
NME3-203ENST00000563367 KCNT2Q6UVM3 1135 aa31.26■■■□□ 2.59
NME3-203ENST00000563367 THNSL1Q8IYQ7 743 aa31.26■■■□□ 2.59
NME3-203ENST00000563367 ATXN2LQ8WWM7 1075 aaKnown RBP31.26■■■□□ 2.59
NME3-203ENST00000563367 MRPL9Q9BYD2 267 aaKnown RBP31.26■■■□□ 2.59
NME3-203ENST00000563367 NSUN3Q9H649 340 aaKnown RBP31.26■■■□□ 2.59
NME3-203ENST00000563367 USP20Q9Y2K6 914 aa31.26■■■□□ 2.59
NME3-203ENST00000563367 HES2Q9Y543 173 aa31.26■■■□□ 2.59
NME3-203ENST00000563367 FGF18O76093 207 aa31.25■■■□□ 2.59
NME3-203ENST00000563367 EDN1P05305 212 aa31.25■■■□□ 2.59
NME3-203ENST00000563367 NOMO2Q5JPE7 1267 aa31.25■■■□□ 2.59
NME3-203ENST00000563367 SPECC1Q5M775 1068 aa31.25■■■□□ 2.59
NME3-203ENST00000563367 FOXD4L5Q5VV16 416 aaPredicted RBP31.25■■■□□ 2.59
NME3-203ENST00000563367 USP49Q70CQ1 688 aa31.25■■■□□ 2.59
NME3-203ENST00000563367 FOXD4L4Q8WXT5 416 aaPredicted RBP31.25■■■□□ 2.59
NME3-203ENST00000563367 CALML4Q96GE6 196 aa31.25■■■□□ 2.59
NME3-203ENST00000563367 PRIMPOLQ96LW4 560 aa31.25■■■□□ 2.59
NME3-203ENST00000563367 RNF39Q9H2S5 420 aa31.25■■■□□ 2.59
NME3-203ENST00000563367 TBC1D13Q9NVG8 400 aa31.25■■■□□ 2.59
NME3-203ENST00000563367 TDRD15B5MCY1 1934 aaKnown RBP31.25■■■□□ 2.59
NME3-203ENST00000563367 TCF20Q9UGU0 1960 aaKnown RBP31.25■■■□□ 2.59
NME3-203ENST00000563367 CNTNAP2Q9UHC6 1331 aa31.24■■■□□ 2.59
NME3-203ENST00000563367 GUCY2CP25092 1073 aa31.24■■■□□ 2.59
NME3-203ENST00000563367 IRS1P35568 1242 aa31.24■■■□□ 2.59
NME3-203ENST00000563367 PEX3P56589 373 aa31.24■■■□□ 2.59
NME3-203ENST00000563367 RAD51AP2Q09MP3 1159 aa31.24■■■□□ 2.59
NME3-203ENST00000563367 KARSQ15046 597 aaKnown RBP31.24■■■□□ 2.59
NME3-203ENST00000563367 MAPK6Q16659 721 aa31.24■■■□□ 2.59
NME3-203ENST00000563367 CNNM3Q8NE01 707 aa31.24■■■□□ 2.59
NME3-203ENST00000563367 ZNF558Q96NG5 402 aa31.24■■■□□ 2.59
NME3-203ENST00000563367 CLIC6Q96NY7 704 aa31.24■■■□□ 2.59
NME3-203ENST00000563367 RSAD1Q9HA92 442 aa31.24■■■□□ 2.59
NME3-203ENST00000563367 SRPRBQ9Y5M8 271 aaKnown RBP31.24■■■□□ 2.59
NME3-203ENST00000563367 PRKCBP05771 671 aa31.23■■■□□ 2.59
NME3-203ENST00000563367 ITGA4P13612 1032 aa31.23■■■□□ 2.59
NME3-203ENST00000563367 LIG1P18858 919 aa31.23■■■□□ 2.59
NME3-203ENST00000563367 PLCG1P19174 1290 aa31.23■■■□□ 2.59
NME3-203ENST00000563367 NPTX2P47972 431 aa31.23■■■□□ 2.59
NME3-203ENST00000563367 CSPP1Q1MSJ5 1256 aa31.23■■■□□ 2.59
NME3-203ENST00000563367 SLC27A1Q6PCB7 646 aa31.23■■■□□ 2.59
NME3-203ENST00000563367 RSPH1Q8WYR4 309 aa31.23■■■□□ 2.59
NME3-203ENST00000563367 HLA-CQ95604 372 aa31.23■■■□□ 2.59
NME3-203ENST00000563367 EPSTI1Q96J88 318 aa31.23■■■□□ 2.59
NME3-203ENST00000563367 BLOC1S4Q9NUP1 217 aa31.23■■■□□ 2.59
NME3-203ENST00000563367 COG5Q9UP83 839 aa31.23■■■□□ 2.59
NME3-203ENST00000563367 NPHP3-ACAD11A0A0J9YXS1 232 aa31.22■■■□□ 2.59
NME3-203ENST00000563367 SFI1A8K8P3 1242 aa31.22■■■□□ 2.59
NME3-203ENST00000563367 ACKR2O00590 384 aa31.22■■■□□ 2.59
NME3-203ENST00000563367 NPTXRO95502 500 aa31.22■■■□□ 2.59
NME3-203ENST00000563367 BCAR1P56945 870 aa31.22■■■□□ 2.59
NME3-203ENST00000563367 MRPS5P82675 430 aaKnown RBP31.22■■■□□ 2.59
NME3-203ENST00000563367 PRPF4BQ13523 1007 aaKnown RBP31.22■■■□□ 2.59
NME3-203ENST00000563367 SLC39A14Q15043 492 aa31.22■■■□□ 2.59
NME3-203ENST00000563367 ARSHQ5FYA8 562 aa31.22■■■□□ 2.59
NME3-203ENST00000563367 DRC1Q96MC2 740 aa31.22■■■□□ 2.59
NME3-203ENST00000563367 ASB2Q96Q27 587 aa31.22■■■□□ 2.59
NME3-203ENST00000563367 CCSER1Q9C0I3 900 aa31.22■■■□□ 2.59
NME3-203ENST00000563367 NXF3Q9H4D5 531 aaKnown RBP31.22■■■□□ 2.59
NME3-203ENST00000563367 NRDE2Q9H7Z3 1164 aa31.22■■■□□ 2.59
NME3-203ENST00000563367 PCDHGC5Q9Y5F6 944 aa31.22■■■□□ 2.59
NME3-203ENST00000563367 VCANP13611 3396 aa31.22■■■□□ 2.59
NME3-203ENST00000563367 CCDC169A6NNP5 214 aa31.21■■■□□ 2.59
NME3-203ENST00000563367 B4GALT3O60512 393 aa31.21■■■□□ 2.59
NME3-203ENST00000563367 EFNA5P52803 228 aa31.21■■■□□ 2.59
NME3-203ENST00000563367 PLCB3Q01970 1234 aa31.21■■■□□ 2.59
NME3-203ENST00000563367 UBE3AQ05086 875 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms