RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 GPR20Q99678 358 aa10.64□□□□□ -0.71
UBFD1-202ENST00000563366 TINF2Q9BSI4 451 aa10.64□□□□□ -0.71
UBFD1-202ENST00000563366 NAA15Q9BXJ9 866 aaKnown RBP10.64□□□□□ -0.71
UBFD1-202ENST00000563366 NRBP1Q9UHY1 535 aa10.64□□□□□ -0.71
UBFD1-202ENST00000563366 CPA4Q9UI42 421 aa10.64□□□□□ -0.71
UBFD1-202ENST00000563366 ZSWIM8A7E2V4 1837 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 SFI1A8K8P3 1242 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 AKR1B15C9JRZ8 316 aaPredicted RBP10.63□□□□□ -0.71
UBFD1-202ENST00000563366 CA12O43570 354 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 PRPF6O94906 941 aaKnown RBP10.63□□□□□ -0.71
UBFD1-202ENST00000563366 STBD1O95210 358 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 NR3C1P04150 777 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 RFX1P22670 979 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 NMT1P30419 496 aaKnown RBP10.63□□□□□ -0.71
UBFD1-202ENST00000563366 RGS2P41220 211 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 NPEPPSP55786 919 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 PEX3P56589 373 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 GTF2BQ00403 316 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 TBC1D8BQ0IIM8 1120 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 EMC2Q15006 297 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 MTERF2Q49AM1 385 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 VWA3BQ502W6 1294 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 FIGNQ5HY92 759 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 IQSEC1Q6DN90 963 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 HAUS6Q7Z4H7 955 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 SLC9A9Q8IVB4 645 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 C12orf56Q8IXR9 622 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 PPTC7Q8NI37 304 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 ATP8B4Q8TF62 1192 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 CACTINQ8WUQ7 758 aaKnown RBP10.63□□□□□ -0.71
UBFD1-202ENST00000563366 TCP11Q8WWU5 503 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 KCNN1Q92952 543 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 PANX2Q96RD6 677 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 ERGIC2Q96RQ1 377 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 FIZ1Q96SL8 496 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 NTPCRQ9BSD7 190 aaKnown RBP10.63□□□□□ -0.71
UBFD1-202ENST00000563366 STRA6Q9BX79 667 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 FGFBP2Q9BYJ0 223 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 NDST4Q9H3R1 872 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 DHX33Q9H6R0 707 aaKnown RBP10.63□□□□□ -0.71
UBFD1-202ENST00000563366 KMT5AQ9NQR1 393 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 ERAP1Q9NZ08 941 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 ARMCX3Q9UH62 379 aaPredicted RBP10.63□□□□□ -0.71
UBFD1-202ENST00000563366 ZNF215Q9UL58 517 aaPredicted RBP10.63□□□□□ -0.71
UBFD1-202ENST00000563366 FRMD4BQ9Y2L6 1034 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.63□□□□□ -0.71
UBFD1-202ENST00000563366 ZMYM2Q9UBW7 1377 aa10.63□□□□□ -0.71
UBFD1-202ENST00000563366 TNPO2O14787 897 aaKnown RBP10.62□□□□□ -0.71
UBFD1-202ENST00000563366 TEX33O43247 280 aa10.62□□□□□ -0.71
UBFD1-202ENST00000563366 STX10O60499 249 aa10.62□□□□□ -0.71
UBFD1-202ENST00000563366 ARIH2O95376 493 aa10.62□□□□□ -0.71
UBFD1-202ENST00000563366 SKILP12757 684 aa10.62□□□□□ -0.71
UBFD1-202ENST00000563366 XRCC5P13010 732 aaKnown RBP10.62□□□□□ -0.71
UBFD1-202ENST00000563366 PSMC2P35998 433 aaKnown RBP10.62□□□□□ -0.71
UBFD1-202ENST00000563366 NAMPTP43490 491 aa10.62□□□□□ -0.71
UBFD1-202ENST00000563366 HSDL1Q3SXM5 330 aa10.62□□□□□ -0.71
UBFD1-202ENST00000563366 OLFML2BQ68BL8 750 aa10.62□□□□□ -0.71
UBFD1-202ENST00000563366 TAPT1Q6NXT6 567 aa10.62□□□□□ -0.71
UBFD1-202ENST00000563366 TRIM59Q8IWR1 403 aa10.62□□□□□ -0.71
UBFD1-202ENST00000563366 ZNF397Q8NF99 534 aaPredicted RBP10.62□□□□□ -0.71
UBFD1-202ENST00000563366 APBA2Q99767 749 aa10.62□□□□□ -0.71
UBFD1-202ENST00000563366 KCNF1Q9H3M0 494 aa10.62□□□□□ -0.71
UBFD1-202ENST00000563366 R3HDMLQ9H3Y0 253 aa10.62□□□□□ -0.71
UBFD1-202ENST00000563366 PDLIM7Q9NR12 457 aa10.62□□□□□ -0.71
UBFD1-202ENST00000563366 COL1A2P08123 1366 aa10.62□□□□□ -0.71
UBFD1-202ENST00000563366 CCDC169A6NNP5 214 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 KIAA0391O15091 583 aaKnown RBP10.61□□□□□ -0.71
UBFD1-202ENST00000563366 MAPK13O15264 365 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 ARHGAP6O43182 974 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 HBP1O60381 514 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 SORBS3O60504 671 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 MFAP3LO75121 409 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 PPFIA4O75335 1185 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 MAFO75444 373 aaPredicted RBP10.61□□□□□ -0.71
UBFD1-202ENST00000563366 TRIM21P19474 475 aaKnown RBP10.61□□□□□ -0.71
UBFD1-202ENST00000563366 HOXD13P35453 343 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 NPTX2P47972 431 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 ARHGAP1Q07960 439 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 ACVR2BQ13705 512 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 MXD4Q14582 209 aaPredicted RBP10.61□□□□□ -0.71
UBFD1-202ENST00000563366 TARBP2Q15633 366 aaKnown RBP10.61□□□□□ -0.71
UBFD1-202ENST00000563366 DUSP28Q4G0W2 176 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 ZC2HC1CQ53FD0 456 aaPredicted RBP10.61□□□□□ -0.71
UBFD1-202ENST00000563366 MIIPQ5JXC2 388 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 ARMCX5Q6P1M9 558 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 MAEAQ7L5Y9 396 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 TRMT1LQ7Z2T5 733 aaKnown RBP10.61□□□□□ -0.71
UBFD1-202ENST00000563366 USP37Q86T82 979 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 MAP4K3Q8IVH8 894 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 KIAA1524Q8TCG1 905 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 FOXJ1Q92949 421 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 KATNBL1Q9H079 304 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 POLR3FQ9H1D9 316 aaPredicted RBP10.61□□□□□ -0.71
UBFD1-202ENST00000563366 BCAS3Q9H6U6 928 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 AGPAT3Q9NRZ7 376 aa10.61□□□□□ -0.71
UBFD1-202ENST00000563366 A0A1W2PQJ5 194 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 DENND3A2RUS2 1198 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 TMEM150BA6NC51 233 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 SLC16A4O15374 487 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 TGFB1I1O43294 461 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms