RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 POLR3BQ9NW08 1133 aaPredicted RBP4.37□□□□□ -1.71
SHCBP1-202ENST00000563219 SAE1Q9UBE0 346 aaPredicted RBP4.37□□□□□ -1.71
SHCBP1-202ENST00000563219 PRSS50Q9UI38 385 aa4.37□□□□□ -1.71
SHCBP1-202ENST00000563219 SYNPO2Q9UMS6 1093 aa4.37□□□□□ -1.71
SHCBP1-202ENST00000563219 VWA7Q9Y334 891 aa4.37□□□□□ -1.71
SHCBP1-202ENST00000563219 PCDHB6Q9Y5E3 794 aa4.37□□□□□ -1.71
SHCBP1-202ENST00000563219 SLC30A1Q9Y6M5 507 aa4.37□□□□□ -1.71
SHCBP1-202ENST00000563219 A0A0A6YYK5 440 aaPredicted RBP4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 SHTN1A0MZ66 631 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 ARHGAP6O43182 974 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 H2AFYO75367 372 aaKnown RBP4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 SEC24DO94855 1032 aaPredicted RBP4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 PCDH8O95206 1070 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 HMGCRP04035 888 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 ACO1P21399 889 aaKnown RBP4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 MTNR1BP49286 362 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 SESN2P58004 480 aaPredicted RBP4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 DUSP8Q13202 625 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 TRIM25Q14258 630 aaKnown RBP4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 USP39Q53GS9 565 aaKnown RBP4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 MIIPQ5JXC2 388 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 USP30Q70CQ3 517 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 POLNQ7Z5Q5 900 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 RAVER1Q8IY67 606 aaKnown RBP4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 OR14C36Q8NHC7 312 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 SSH1Q8WYL5 1049 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 FUBP3Q96I24 572 aaKnown RBP eCLIP4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 DYDC2Q96IM9 177 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 SMAD5Q99717 465 aaKnown RBP4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 NOL10Q9BSC4 688 aaKnown RBP4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 SOX7Q9BT81 388 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 ZNF341Q9BYN7 854 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 OSBPL6Q9BZF3 934 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 METTL14Q9HCE5 456 aaKnown RBP4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 MSL2Q9HCI7 577 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 ZNF277Q9NRM2 450 aaPredicted RBP4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 PUF60Q9UHX1 559 aaKnown RBP4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 CDC42EP3Q9UKI2 254 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 TNKSO95271 1327 aa4.36□□□□□ -1.71
SHCBP1-202ENST00000563219 NRP2O60462 931 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 ALDH1L1O75891 902 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 LPLP06858 475 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 MYBL2P10244 700 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 MTHFD2P13995 350 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 RPS19P39019 145 aaKnown RBP4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 LGALS4P56470 323 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 SPIDRQ14159 915 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 MAN2A1Q16706 1144 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 ABCB5Q2M3G0 1257 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 NRN1LQ496H8 165 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 KLHDC10Q6PID8 442 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 MAMDC4Q6UXC1 1216 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 FMNL3Q8IVF7 1028 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 AMOTL1Q8IY63 956 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 TGFBRAP1Q8WUH2 860 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 GAB3Q8WWW8 586 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 AUTS2Q8WXX7 1259 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 CFHR4Q92496 578 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 EXTL1Q92935 676 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 GFM2Q969S9 779 aaKnown RBP4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 FAXDC2Q96IV6 333 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 PLA2G12BQ9BX93 195 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 KIAA1683Q9H0B3 1180 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 C12orf65Q9H3J6 166 aaKnown RBP4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 CHPF2Q9P2E5 772 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 CDY2AQ9Y6F7 541 aa4.35□□□□□ -1.71
SHCBP1-202ENST00000563219 NPIPB8E9PQR5 432 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 MT-CO1P00395 513 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 AGXTP21549 392 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 STAT5BP51692 787 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 NEK2P51955 445 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 SRSF2Q01130 221 aaKnown RBP4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 PPARAQ07869 468 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 KLF10Q13118 480 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 PCOLCEQ15113 449 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 MUM1Q2TAK8 710 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 ANO4Q32M45 955 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 TOR2AQ5JU69 321 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 PGM2L1Q6PCE3 622 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 GAREM2Q75VX8 874 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 RTKN2Q8IZC4 609 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 TSPEARQ8WU66 669 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 LPPQ93052 612 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 CHMP4CQ96CF2 233 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 FAM89AQ96GI7 184 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 PAWRQ96IZ0 340 aaKnown RBP4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 WDR92Q96MX6 357 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 OR14A2Q96R54 314 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 FDXACB1Q9BRP7 624 aaPredicted RBP4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 QRSL1Q9H0R6 528 aaKnown RBP4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 OR10A2Q9H208 303 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 SLITRK6Q9H5Y7 841 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 DNAJC28Q9NX36 388 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 PLA2G3Q9NZ20 509 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 EVLQ9UI08 416 aaPredicted RBP4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 MAGEL2Q9UJ55 1249 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 USP18Q9UMW8 372 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 EDARQ9UNE0 448 aa4.34□□□□□ -1.71
SHCBP1-202ENST00000563219 KLHL33A6NCF5 533 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms