RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 PTGIRP43119 386 aa23.49■■□□□ 1.35
LINC00565-201ENST00000562710 SMTNP53814 917 aa23.49■■□□□ 1.35
LINC00565-201ENST00000562710 SEPT12Q8IYM1 358 aa23.49■■□□□ 1.35
LINC00565-201ENST00000562710 MDM1Q8TC05 714 aa23.49■■□□□ 1.35
LINC00565-201ENST00000562710 KRT35Q92764 455 aa23.49■■□□□ 1.35
LINC00565-201ENST00000562710 CENPTQ96BT3 561 aa23.49■■□□□ 1.35
LINC00565-201ENST00000562710 ACTR5Q9H9F9 607 aaPredicted RBP23.49■■□□□ 1.35
LINC00565-201ENST00000562710 ERMARDQ5T6L9 678 aa23.48■■□□□ 1.35
LINC00565-201ENST00000562710 DENND2CQ68D51 928 aa23.48■■□□□ 1.35
LINC00565-201ENST00000562710 CCDC174Q6PII3 467 aa23.48■■□□□ 1.35
LINC00565-201ENST00000562710 INTS8Q75QN2 995 aaKnown RBP23.48■■□□□ 1.35
LINC00565-201ENST00000562710 ARHGEF19Q8IW93 802 aa23.48■■□□□ 1.35
LINC00565-201ENST00000562710 PRELID2Q8N945 189 aa23.48■■□□□ 1.35
LINC00565-201ENST00000562710 GRHL1Q9NZI5 618 aa23.48■■□□□ 1.35
LINC00565-201ENST00000562710 VIL1P09327 827 aaKnown RBP23.48■■□□□ 1.35
LINC00565-201ENST00000562710 MARCKSL1P49006 195 aa23.48■■□□□ 1.35
LINC00565-201ENST00000562710 GPC5P78333 572 aa23.48■■□□□ 1.35
LINC00565-201ENST00000562710 GKAP1Q5VSY0 366 aaPredicted RBP23.48■■□□□ 1.35
LINC00565-201ENST00000562710 B3GNT9Q6UX72 402 aa23.48■■□□□ 1.35
LINC00565-201ENST00000562710 CPLX4Q7Z7G2 160 aa23.48■■□□□ 1.35
LINC00565-201ENST00000562710 VTI1AQ96AJ9 217 aa23.48■■□□□ 1.35
LINC00565-201ENST00000562710 RNF25Q96BH1 459 aaPredicted RBP23.48■■□□□ 1.35
LINC00565-201ENST00000562710 PGM2Q96G03 612 aa23.48■■□□□ 1.35
LINC00565-201ENST00000562710 XPO6Q96QU8 1125 aaKnown RBP23.48■■□□□ 1.35
LINC00565-201ENST00000562710 ZSWIM1Q9BR11 485 aa23.48■■□□□ 1.35
LINC00565-201ENST00000562710 BCS1LQ9Y276 419 aa23.48■■□□□ 1.35
LINC00565-201ENST00000562710 COL11A2P13942 1736 aaPredicted RBP23.47■■□□□ 1.35
LINC00565-201ENST00000562710 GOLGA6L7A0A1B0GV03 622 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 PHF20L1A8MW92 1017 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 K7ENM7 598 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 ENTPD3O75355 529 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 CETN1Q12798 172 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 MASTLQ96GX5 879 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 CSRNP1Q96S65 589 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 TEKT3Q9BXF9 490 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 PCIF1Q9H4Z3 704 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 EHMT1Q9H9B1 1298 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 PCYOX1Q9UHG3 505 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 CCDC169A6NNP5 214 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 ECE2O60344 883 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 ONECUT3O60422 494 aaPredicted RBP23.47■■□□□ 1.35
LINC00565-201ENST00000562710 DRD4P21917 467 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 CTNNA2P26232 953 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 PDE6BP35913 854 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 VAMP7P51809 220 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 PPP3CAQ08209 521 aa23.47■■□□□ 1.35
LINC00565-201ENST00000562710 RPUSD2Q8IZ73 545 aaKnown RBP23.47■■□□□ 1.35
LINC00565-201ENST00000562710 TMEM110-MUSTN1A8MSY1 372 aa23.46■■□□□ 1.35
LINC00565-201ENST00000562710 RASSF9O75901 435 aa23.46■■□□□ 1.35
LINC00565-201ENST00000562710 SETQ01105 290 aaPredicted RBP23.46■■□□□ 1.35
LINC00565-201ENST00000562710 CHMP6Q96FZ7 201 aa23.46■■□□□ 1.35
LINC00565-201ENST00000562710 RPS6KC1Q96S38 1066 aa23.46■■□□□ 1.35
LINC00565-201ENST00000562710 FAM129AQ9BZQ8 928 aa23.46■■□□□ 1.35
LINC00565-201ENST00000562710 ARHGEF10LQ9HCE6 1279 aa23.46■■□□□ 1.35
LINC00565-201ENST00000562710 RPTORQ8N122 1335 aa23.46■■□□□ 1.35
LINC00565-201ENST00000562710 ZNF646O15015 1829 aaPredicted RBP23.45■■□□□ 1.35
LINC00565-201ENST00000562710 IPO5O00410 1097 aaKnown RBP23.45■■□□□ 1.35
LINC00565-201ENST00000562710 PODXLO00592 558 aa23.45■■□□□ 1.35
LINC00565-201ENST00000562710 P4HA2O15460 535 aa23.45■■□□□ 1.35
LINC00565-201ENST00000562710 RPL21P46778 160 aaKnown RBP23.45■■□□□ 1.35
LINC00565-201ENST00000562710 PEX5P50542 639 aa23.45■■□□□ 1.35
LINC00565-201ENST00000562710 SLC29A2Q14542 456 aa23.45■■□□□ 1.35
LINC00565-201ENST00000562710 SPRED3Q2MJR0 410 aa23.45■■□□□ 1.35
LINC00565-201ENST00000562710 EPC2Q52LR7 807 aa23.45■■□□□ 1.35
LINC00565-201ENST00000562710 ZDHHC14Q8IZN3 488 aa23.45■■□□□ 1.35
LINC00565-201ENST00000562710 CCDC114Q96M63 670 aa23.45■■□□□ 1.35
LINC00565-201ENST00000562710 TISP43B9A030 160 aa23.45■■□□□ 1.34
LINC00565-201ENST00000562710 DNM1LO00429 736 aa23.45■■□□□ 1.34
LINC00565-201ENST00000562710 CTNND1O60716 968 aaKnown RBP23.45■■□□□ 1.34
LINC00565-201ENST00000562710 RTN2O75298 545 aa23.45■■□□□ 1.34
LINC00565-201ENST00000562710 GBP1P32455 592 aa23.45■■□□□ 1.34
LINC00565-201ENST00000562710 GCLMP48507 274 aa23.45■■□□□ 1.34
LINC00565-201ENST00000562710 ANKRD20A8PQ5CZ79 823 aa23.45■■□□□ 1.34
LINC00565-201ENST00000562710 ZNF746Q6NUN9 644 aaPredicted RBP23.45■■□□□ 1.34
LINC00565-201ENST00000562710 TTC27Q6P3X3 843 aa23.45■■□□□ 1.34
LINC00565-201ENST00000562710 PADI6Q6TGC4 694 aa23.45■■□□□ 1.34
LINC00565-201ENST00000562710 ACER1Q8TDN7 264 aa23.45■■□□□ 1.34
LINC00565-201ENST00000562710 TMEM206Q9H813 350 aa23.45■■□□□ 1.34
LINC00565-201ENST00000562710 KLC4Q9NSK0 619 aa23.45■■□□□ 1.34
LINC00565-201ENST00000562710 SPATA31A6Q5VVP1 1343 aa23.45■■□□□ 1.34
LINC00565-201ENST00000562710 GGPS1O95749 300 aa23.44■■□□□ 1.34
LINC00565-201ENST00000562710 COMTP21964 271 aa23.44■■□□□ 1.34
LINC00565-201ENST00000562710 MMP13P45452 471 aa23.44■■□□□ 1.34
LINC00565-201ENST00000562710 MESDQ14696 234 aa23.44■■□□□ 1.34
LINC00565-201ENST00000562710 MAEAQ7L5Y9 396 aa23.44■■□□□ 1.34
LINC00565-201ENST00000562710 NLGN1Q8N2Q7 840 aa23.44■■□□□ 1.34
LINC00565-201ENST00000562710 RANBP17Q9H2T7 1088 aaKnown RBP23.44■■□□□ 1.34
LINC00565-201ENST00000562710 LARSQ9P2J5 1176 aaKnown RBP23.44■■□□□ 1.34
LINC00565-201ENST00000562710 TMX2Q9Y320 296 aa23.44■■□□□ 1.34
LINC00565-201ENST00000562710 MRPL11Q9Y3B7 192 aaKnown RBP23.44■■□□□ 1.34
LINC00565-201ENST00000562710 PCDHA3Q9Y5H8 950 aa23.44■■□□□ 1.34
LINC00565-201ENST00000562710 TLDC2A0PJX2 215 aa23.44■■□□□ 1.34
LINC00565-201ENST00000562710 CHN1P15882 459 aa23.44■■□□□ 1.34
LINC00565-201ENST00000562710 SEL1L2Q5TEA6 688 aa23.44■■□□□ 1.34
LINC00565-201ENST00000562710 CCDC137Q6PK04 289 aaKnown RBP23.44■■□□□ 1.34
LINC00565-201ENST00000562710 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.44■■□□□ 1.34
LINC00565-201ENST00000562710 SLC40A1Q9NP59 571 aa23.44■■□□□ 1.34
LINC00565-201ENST00000562710 PARP2Q9UGN5 583 aa23.44■■□□□ 1.34
LINC00565-201ENST00000562710 CNOT7Q9UIV1 285 aaKnown RBP23.44■■□□□ 1.34
LINC00565-201ENST00000562710 C1orf220Q5T0J3 134 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms