RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 TIGD5Q53EQ6 642 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 NAALADL2Q58DX5 795 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 SPECC1Q5M775 1068 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 NOTUMQ6P988 496 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 ZBTB8OSQ8IWT0 167 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 DEPTORQ8TB45 409 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 POF1BQ8WVV4 589 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 KIFAP3Q92845 792 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 CDK5RAP3Q96JB5 506 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 AK8Q96MA6 479 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 USP28Q96RU2 1077 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 LMAN2LQ9H0V9 348 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 CSRNP2Q9H175 543 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 RNF39Q9H2S5 420 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 HES2Q9Y543 173 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 ATG2AQ2TAZ0 1938 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 FGF18O76093 207 aa21.38■■□□□ 1.01
TMEM249-202ENST00000562477 HSP90AA1P07900 732 aaKnown RBP21.38■■□□□ 1.01
TMEM249-202ENST00000562477 AXLP30530 894 aa21.38■■□□□ 1.01
TMEM249-202ENST00000562477 LONP1P36776 959 aaKnown RBP21.38■■□□□ 1.01
TMEM249-202ENST00000562477 NAMPTP43490 491 aa21.38■■□□□ 1.01
TMEM249-202ENST00000562477 SLC12A3P55017 1021 aa21.38■■□□□ 1.01
TMEM249-202ENST00000562477 PCBP1Q15365 356 aaKnown RBP eCLIP21.38■■□□□ 1.01
TMEM249-202ENST00000562477 NOMO2Q5JPE7 1267 aa21.38■■□□□ 1.01
TMEM249-202ENST00000562477 GLB1LQ6UWU2 654 aa21.38■■□□□ 1.01
TMEM249-202ENST00000562477 PPP4R3CPQ6ZMV5 832 aa21.38■■□□□ 1.01
TMEM249-202ENST00000562477 USP49Q70CQ1 688 aa21.38■■□□□ 1.01
TMEM249-202ENST00000562477 THNSL1Q8IYQ7 743 aa21.38■■□□□ 1.01
TMEM249-202ENST00000562477 CLIC6Q96NY7 704 aa21.38■■□□□ 1.01
TMEM249-202ENST00000562477 CCDC113Q9H0I3 377 aa21.38■■□□□ 1.01
TMEM249-202ENST00000562477 FZD8Q9H461 694 aa21.38■■□□□ 1.01
TMEM249-202ENST00000562477 NSUN3Q9H649 340 aaKnown RBP21.38■■□□□ 1.01
TMEM249-202ENST00000562477 AAASQ9NRG9 546 aa21.38■■□□□ 1.01
TMEM249-202ENST00000562477 FBXO2Q9UK22 296 aaPredicted RBP21.38■■□□□ 1.01
TMEM249-202ENST00000562477 IPPQ9Y573 584 aa21.38■■□□□ 1.01
TMEM249-202ENST00000562477 NPHP3-ACAD11A0A0J9YXS1 232 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 B4GALT3O60512 393 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 NPTXRO95502 500 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 PRKCBP05771 671 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 PLA2G4BP0C869 781 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 NCLP19338 710 aaKnown RBP21.37■■□□□ 1.01
TMEM249-202ENST00000562477 UBA7P41226 1012 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 KARSQ15046 597 aaKnown RBP21.37■■□□□ 1.01
TMEM249-202ENST00000562477 KCNT2Q6UVM3 1135 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 PGBD4Q96DM1 585 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 CCDC51Q96ER9 411 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 IFT74Q96LB3 600 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 ZNF558Q96NG5 402 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 APOL6Q9BWW8 343 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 NT5C3AQ9H0P0 336 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 C2orf40Q9H1Z8 148 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 NXF3Q9H4D5 531 aaKnown RBP21.37■■□□□ 1.01
TMEM249-202ENST00000562477 TBC1D13Q9NVG8 400 aa21.37■■□□□ 1.01
TMEM249-202ENST00000562477 PRMT7Q9NVM4 692 aaPredicted RBP21.37■■□□□ 1.01
TMEM249-202ENST00000562477 SFI1A8K8P3 1242 aa21.36■■□□□ 1.01
TMEM249-202ENST00000562477 NT5C1B-RDH14C9J2C7 533 aa21.36■■□□□ 1.01
TMEM249-202ENST00000562477 PLCG1P19174 1290 aa21.36■■□□□ 1.01
TMEM249-202ENST00000562477 PEX3P56589 373 aa21.36■■□□□ 1.01
TMEM249-202ENST00000562477 NCBP1Q09161 790 aaKnown RBP21.36■■□□□ 1.01
TMEM249-202ENST00000562477 PPP2R5AQ15172 486 aa21.36■■□□□ 1.01
TMEM249-202ENST00000562477 FAM187BQ17R55 369 aa21.36■■□□□ 1.01
TMEM249-202ENST00000562477 SYT2Q8N9I0 419 aaPredicted RBP21.36■■□□□ 1.01
TMEM249-202ENST00000562477 ATXN2LQ8WWM7 1075 aaKnown RBP21.36■■□□□ 1.01
TMEM249-202ENST00000562477 HLA-CQ95604 372 aa21.36■■□□□ 1.01
TMEM249-202ENST00000562477 EPSTI1Q96J88 318 aa21.36■■□□□ 1.01
TMEM249-202ENST00000562477 MRPL9Q9BYD2 267 aaKnown RBP21.36■■□□□ 1.01
TMEM249-202ENST00000562477 GBP3Q9H0R5 595 aa21.36■■□□□ 1.01
TMEM249-202ENST00000562477 ZSCAN16Q9H4T2 348 aaPredicted RBP21.36■■□□□ 1.01
TMEM249-202ENST00000562477 RSAD1Q9HA92 442 aa21.36■■□□□ 1.01
TMEM249-202ENST00000562477 CNTNAP2Q9UHC6 1331 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 PLXNA4Q9HCM2 1894 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 A0A1B0GUA9 196 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 CCDC169A6NNP5 214 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 ZC3H11AO75152 810 aaKnown RBP eCLIP21.35■■□□□ 1.01
TMEM249-202ENST00000562477 ITGA4P13612 1032 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 GTF2F1P35269 517 aaKnown RBP eCLIP21.35■■□□□ 1.01
TMEM249-202ENST00000562477 NPTX2P47972 431 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 KCNQ1P51787 676 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 BCAR1P56945 870 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 MRPS5P82675 430 aaKnown RBP21.35■■□□□ 1.01
TMEM249-202ENST00000562477 CACNB1Q02641 598 aaPredicted RBP21.35■■□□□ 1.01
TMEM249-202ENST00000562477 PKP1Q13835 747 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 MAPK6Q16659 721 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 ADGRD2Q7Z7M1 963 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 ZNF280BQ86YH2 543 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 CALML4Q96GE6 196 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 ASB2Q96Q27 587 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 PDZD7Q9H5P4 517 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 NRDE2Q9H7Z3 1164 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 BLOC1S4Q9NUP1 217 aa21.35■■□□□ 1.01
TMEM249-202ENST00000562477 GUCY2CP25092 1073 aa21.34■■□□□ 1.01
TMEM249-202ENST00000562477 HYAL1Q12794 435 aa21.34■■□□□ 1.01
TMEM249-202ENST00000562477 PRPF4BQ13523 1007 aaKnown RBP21.34■■□□□ 1.01
TMEM249-202ENST00000562477 DHX8Q14562 1220 aaKnown RBP21.34■■□□□ 1.01
TMEM249-202ENST00000562477 MCM6Q14566 821 aa21.34■■□□□ 1.01
TMEM249-202ENST00000562477 FOXD4L6Q3SYB3 417 aaPredicted RBP21.34■■□□□ 1.01
TMEM249-202ENST00000562477 ARSHQ5FYA8 562 aa21.34■■□□□ 1.01
TMEM249-202ENST00000562477 EEF1DP3Q658K8 133 aa21.34■■□□□ 1.01
TMEM249-202ENST00000562477 SLC27A1Q6PCB7 646 aa21.34■■□□□ 1.01
TMEM249-202ENST00000562477 FOXD4L3Q6VB84 417 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms