RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 TSHZ1Q6ZSZ6 1077 aa24.71■■□□□ 1.55
SYNGR3-202ENST00000562045 SFR1Q86XK3 245 aa24.71■■□□□ 1.55
SYNGR3-202ENST00000562045 TCP11Q8WWU5 503 aa24.71■■□□□ 1.55
SYNGR3-202ENST00000562045 IFIH1Q9BYX4 1025 aaKnown RBP24.71■■□□□ 1.55
SYNGR3-202ENST00000562045 RWDD2AQ9UIY3 292 aa24.71■■□□□ 1.55
SYNGR3-202ENST00000562045 MAPK7Q13164 816 aa24.7■■□□□ 1.54
SYNGR3-202ENST00000562045 CAPSQ13938 189 aa24.7■■□□□ 1.54
SYNGR3-202ENST00000562045 FAM228AQ86W67 206 aa24.7■■□□□ 1.54
SYNGR3-202ENST00000562045 GUF1Q8N442 669 aaKnown RBP24.7■■□□□ 1.54
SYNGR3-202ENST00000562045 MYCT1Q8N699 235 aa24.7■■□□□ 1.54
SYNGR3-202ENST00000562045 MCPH1Q8NEM0 835 aa24.7■■□□□ 1.54
SYNGR3-202ENST00000562045 DHTKD1Q96HY7 919 aaPredicted RBP24.7■■□□□ 1.54
SYNGR3-202ENST00000562045 DRC1Q96MC2 740 aa24.7■■□□□ 1.54
SYNGR3-202ENST00000562045 MINDY3Q9H8M7 445 aa24.7■■□□□ 1.54
SYNGR3-202ENST00000562045 PADI3Q9ULW8 664 aa24.7■■□□□ 1.54
SYNGR3-202ENST00000562045 CTNND2Q9UQB3 1225 aa24.7■■□□□ 1.54
SYNGR3-202ENST00000562045 KIF20AO95235 890 aa24.69■■□□□ 1.54
SYNGR3-202ENST00000562045 PFKMP08237 780 aa24.69■■□□□ 1.54
SYNGR3-202ENST00000562045 NCAPHQ15003 741 aa24.69■■□□□ 1.54
SYNGR3-202ENST00000562045 PSRC1Q6PGN9 363 aaPredicted RBP24.69■■□□□ 1.54
SYNGR3-202ENST00000562045 NELFBQ8WX92 580 aa24.69■■□□□ 1.54
SYNGR3-202ENST00000562045 SCLT1Q96NL6 688 aa24.69■■□□□ 1.54
SYNGR3-202ENST00000562045 TBC1D7Q9P0N9 293 aa24.69■■□□□ 1.54
SYNGR3-202ENST00000562045 LARSQ9P2J5 1176 aaKnown RBP24.69■■□□□ 1.54
SYNGR3-202ENST00000562045 TRIOBPQ9H2D6 2365 aa24.69■■□□□ 1.54
SYNGR3-202ENST00000562045 SFI1A8K8P3 1242 aa24.69■■□□□ 1.54
SYNGR3-202ENST00000562045 DARSP14868 501 aaKnown RBP24.69■■□□□ 1.54
SYNGR3-202ENST00000562045 CNKSR3Q6P9H4 555 aa24.69■■□□□ 1.54
SYNGR3-202ENST00000562045 RNF149Q8NC42 400 aa24.69■■□□□ 1.54
SYNGR3-202ENST00000562045 TMX1Q9H3N1 280 aa24.69■■□□□ 1.54
SYNGR3-202ENST00000562045 EIF4BP23588 611 aaKnown RBP24.68■■□□□ 1.54
SYNGR3-202ENST00000562045 RASIP1Q5U651 963 aa24.68■■□□□ 1.54
SYNGR3-202ENST00000562045 TDHQ8IZJ6 230 aa24.68■■□□□ 1.54
SYNGR3-202ENST00000562045 MYOCDQ8IZQ8 938 aa24.68■■□□□ 1.54
SYNGR3-202ENST00000562045 HERVK_113Q902F9 699 aa24.68■■□□□ 1.54
SYNGR3-202ENST00000562045 MRPL44Q9H9J2 332 aaKnown RBP24.68■■□□□ 1.54
SYNGR3-202ENST00000562045 ERVK-5Q9HDB9 667 aa24.68■■□□□ 1.54
SYNGR3-202ENST00000562045 ST3GAL5Q9UNP4 418 aa24.68■■□□□ 1.54
SYNGR3-202ENST00000562045 RPS6KA5O75582 802 aa24.67■■□□□ 1.54
SYNGR3-202ENST00000562045 ODR4Q5SWX8 454 aa24.67■■□□□ 1.54
SYNGR3-202ENST00000562045 ZNF410Q86VK4 478 aa24.67■■□□□ 1.54
SYNGR3-202ENST00000562045 ANP32BQ92688 251 aaKnown RBP24.67■■□□□ 1.54
SYNGR3-202ENST00000562045 KIFAP3Q92845 792 aa24.67■■□□□ 1.54
SYNGR3-202ENST00000562045 MED15Q96RN5 788 aa24.67■■□□□ 1.54
SYNGR3-202ENST00000562045 SQORQ9Y6N5 450 aa24.67■■□□□ 1.54
SYNGR3-202ENST00000562045 BICDL2A1A5D9 508 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 STX17P56962 302 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 NFX1Q12986 1120 aaKnown RBP24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 PAK2Q13177 524 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 MXD4Q14582 209 aaPredicted RBP24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 SPATA1Q5VX52 437 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 FAM109BQ6ICB4 259 aaPredicted RBP24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 FAM178BQ8IXR5 827 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 LINC01599Q8WXQ3 324 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 SEPT8Q92599 483 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 RNPC3Q96LT9 517 aaKnown RBP24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 KIFC3Q9BVG8 833 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 NFE2L3Q9Y4A8 694 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 ADGRA3Q8IWK6 1321 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 ASAP2O43150 1006 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 MGEA5O60502 916 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 PLS3P13797 630 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 CCNE1P24864 410 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 TMCO2Q7Z6W1 182 aaPredicted RBP24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 RTN4RL1Q86UN2 441 aaPredicted RBP24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 GLIS3Q8NEA6 775 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 P2RX5Q93086 422 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 GCOM2Q9BZD3 368 aaPredicted RBP24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 C17orf75Q9HAS0 396 aa24.66■■□□□ 1.54
SYNGR3-202ENST00000562045 GBF1Q92538 1859 aa24.65■■□□□ 1.54
SYNGR3-202ENST00000562045 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.65■■□□□ 1.54
SYNGR3-202ENST00000562045 ZBBXA8MT70 800 aa24.65■■□□□ 1.54
SYNGR3-202ENST00000562045 DEFB103AP81534 67 aa24.65■■□□□ 1.54
SYNGR3-202ENST00000562045 STXBP4Q6ZWJ1 553 aa24.65■■□□□ 1.54
SYNGR3-202ENST00000562045 USP38Q8NB14 1042 aa24.65■■□□□ 1.54
SYNGR3-202ENST00000562045 FGFBP2Q9BYJ0 223 aa24.65■■□□□ 1.54
SYNGR3-202ENST00000562045 GCNT3O95395 438 aa24.64■■□□□ 1.54
SYNGR3-202ENST00000562045 MAPTP10636 758 aaKnown RBP24.64■■□□□ 1.54
SYNGR3-202ENST00000562045 PTENP60484 403 aa24.64■■□□□ 1.54
SYNGR3-202ENST00000562045 WDR5P61964 334 aaKnown RBP24.64■■□□□ 1.54
SYNGR3-202ENST00000562045 CDC42EP1Q00587 391 aa24.64■■□□□ 1.54
SYNGR3-202ENST00000562045 TPD52L1Q16890 204 aaPredicted RBP24.64■■□□□ 1.54
SYNGR3-202ENST00000562045 EPM2AIP1Q7L775 607 aaPredicted RBP24.64■■□□□ 1.54
SYNGR3-202ENST00000562045 SCFD1Q8WVM8 642 aa24.64■■□□□ 1.54
SYNGR3-202ENST00000562045 FIZ1Q96SL8 496 aa24.64■■□□□ 1.54
SYNGR3-202ENST00000562045 LRRIQ4A6NIV6 560 aa24.64■■□□□ 1.53
SYNGR3-202ENST00000562045 EIF3DO15371 548 aaKnown RBP eCLIP24.64■■□□□ 1.53
SYNGR3-202ENST00000562045 PLCB2Q00722 1185 aa24.64■■□□□ 1.53
SYNGR3-202ENST00000562045 IKBKEQ14164 716 aa24.64■■□□□ 1.53
SYNGR3-202ENST00000562045 CENPPQ6IPU0 288 aa24.64■■□□□ 1.53
SYNGR3-202ENST00000562045 ZNF710Q8N1W2 664 aa24.64■■□□□ 1.53
SYNGR3-202ENST00000562045 SLC17A8Q8NDX2 589 aa24.64■■□□□ 1.53
SYNGR3-202ENST00000562045 FANCLQ9NW38 375 aa24.64■■□□□ 1.53
SYNGR3-202ENST00000562045 SZT2Q5T011 3432 aa24.63■■□□□ 1.53
SYNGR3-202ENST00000562045 ACTN1P12814 892 aa24.63■■□□□ 1.53
SYNGR3-202ENST00000562045 CASP5P51878 434 aa24.63■■□□□ 1.53
SYNGR3-202ENST00000562045 PEX3P56589 373 aa24.63■■□□□ 1.53
SYNGR3-202ENST00000562045 FOXR2Q6PJQ5 311 aa24.63■■□□□ 1.53
SYNGR3-202ENST00000562045 ZNF720Q7Z2F6 126 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms