RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 SPG21Q9NZD8 308 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 PUF60Q9UHX1 559 aaKnown RBP9.2□□□□□ -0.94
GINS3-204ENST00000561952 PCDHA12Q9UN75 941 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 TRIOO75962 3097 aa9.2□□□□□ -0.94
GINS3-204ENST00000561952 INO80B-WBP1J3KQ70 363 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 FSCN2O14926 492 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 EIF5BO60841 1220 aaKnown RBP9.19□□□□□ -0.94
GINS3-204ENST00000561952 ERLIN2O94905 339 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 SLITRK3O94933 977 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 EOMESO95936 686 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 PPM1AP35813 382 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 TECP42680 631 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 CDC42EP1Q00587 391 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 KRT17Q04695 432 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 NBR1Q14596 966 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 ZNF174Q15697 407 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 DUSP6Q16828 381 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 NOMO2Q5JPE7 1267 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 GLB1LQ6UWU2 654 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 FERMT3Q86UX7 667 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 CDR2LQ86X02 465 aaPredicted RBP9.19□□□□□ -0.94
GINS3-204ENST00000561952 SLC39A11Q8N1S5 342 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 FAM184AQ8NB25 1140 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 ASAP3Q8TDY4 903 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 TCP11Q8WWU5 503 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 TMEM169Q96HH4 297 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 MRPL9Q9BYD2 267 aaKnown RBP9.19□□□□□ -0.94
GINS3-204ENST00000561952 XPNPEP1Q9NQW7 623 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 CHST12Q9NRB3 414 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 TBC1D13Q9NVG8 400 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 DNAJB4Q9UDY4 337 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 MUTYHQ9UIF7 546 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 CDH22Q9UJ99 828 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 LIMCH1Q9UPQ0 1083 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 USP15Q9Y4E8 981 aaPredicted RBP9.19□□□□□ -0.94
GINS3-204ENST00000561952 PCDHB2Q9Y5E7 798 aa9.19□□□□□ -0.94
GINS3-204ENST00000561952 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.18□□□□□ -0.94
GINS3-204ENST00000561952 PI4K2BG5E9Z4 385 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 DCXO43602 365 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 B4GALT3O60512 393 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 POMCP01189 267 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 SSBP05455 408 aaKnown RBP eCLIP9.18□□□□□ -0.94
GINS3-204ENST00000561952 LIG1P18858 919 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 ALDH7A1P49419 539 aaKnown RBP9.18□□□□□ -0.94
GINS3-204ENST00000561952 RAB27AP51159 221 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 AFF1P51825 1210 aaKnown RBP9.18□□□□□ -0.94
GINS3-204ENST00000561952 PLCB3Q01970 1234 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 CAPSQ13938 189 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 SMC1AQ14683 1233 aaKnown RBP9.18□□□□□ -0.94
GINS3-204ENST00000561952 C8orf34Q49A92 452 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 AGMOQ6ZNB7 445 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 WDFY4Q6ZS81 3184 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 SRGAP1Q7Z6B7 1085 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 VPS52Q8N1B4 723 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 ZNF687Q8N1G0 1237 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 TMEM87AQ8NBN3 555 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 SMRP1Q8NCR6 262 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 URGCPQ8TCY9 931 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 BCL7CQ8WUZ0 217 aaPredicted RBP9.18□□□□□ -0.94
GINS3-204ENST00000561952 RPGRIP1Q96KN7 1286 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 FAM193BQ96PV7 902 aaPredicted RBP9.18□□□□□ -0.94
GINS3-204ENST00000561952 POP1Q99575 1024 aaKnown RBP9.18□□□□□ -0.94
GINS3-204ENST00000561952 EIF2AQ9BY44 585 aaKnown RBP9.18□□□□□ -0.94
GINS3-204ENST00000561952 POLR3FQ9H1D9 316 aaPredicted RBP9.18□□□□□ -0.94
GINS3-204ENST00000561952 NRDE2Q9H7Z3 1164 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 RSAD1Q9HA92 442 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 GPRC5CQ9NQ84 441 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 PRKAG3Q9UGI9 489 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 HCN4Q9Y3Q4 1203 aa9.18□□□□□ -0.94
GINS3-204ENST00000561952 LRRIQ4A6NIV6 560 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 GAS2O43903 313 aaKnown RBP9.17□□□□□ -0.94
GINS3-204ENST00000561952 TSPAN1O60635 241 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 MED24O75448 989 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 OFD1O75665 1012 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 CXCL14O95715 111 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 WEE2P0C1S8 567 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 OR52Z1P0C646 297 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 SRGAP2BP0DMP2 458 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 SKIP12755 728 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 ALADP13716 330 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 SLC11A1P49279 550 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 RARRES1P49788 294 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 COASYQ13057 564 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 TFDP1Q14186 410 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 TMEM132AQ24JP5 1023 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 TTC38Q5R3I4 469 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 UBXN11Q5T124 520 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 ANKRD54Q6NXT1 300 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 ZNF280BQ86YH2 543 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 RNF135Q8IUD6 432 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 EXOC8Q8IYI6 725 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 PGBD4Q96DM1 585 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 MTMR9Q96QG7 549 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 CDCA3Q99618 268 aaPredicted RBP9.17□□□□□ -0.94
GINS3-204ENST00000561952 TRIM6Q9C030 488 aaPredicted RBP9.17□□□□□ -0.94
GINS3-204ENST00000561952 POLD4Q9HCU8 107 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 NGRNQ9NPE2 291 aaKnown RBP9.17□□□□□ -0.94
GINS3-204ENST00000561952 TSHZ2Q9NRE2 1034 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 LZTS1Q9Y250 596 aa9.17□□□□□ -0.94
GINS3-204ENST00000561952 PRG3Q9Y2Y8 225 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms