RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 CTC1Q2NKJ3 1217 aa26.38■■□□□ 1.81
CDR2-202ENST00000561630 LEXMQ3ZCV2 418 aa26.38■■□□□ 1.81
CDR2-202ENST00000561630 SMG8Q8ND04 991 aaKnown RBP26.38■■□□□ 1.81
CDR2-202ENST00000561630 BSNDQ8WZ55 320 aa26.38■■□□□ 1.81
CDR2-202ENST00000561630 PPP2R3CQ969Q6 453 aa26.38■■□□□ 1.81
CDR2-202ENST00000561630 CSRNP2Q9H175 543 aa26.38■■□□□ 1.81
CDR2-202ENST00000561630 TLR9Q9NR96 1032 aa26.38■■□□□ 1.81
CDR2-202ENST00000561630 TBC1D13Q9NVG8 400 aa26.38■■□□□ 1.81
CDR2-202ENST00000561630 SPG21Q9NZD8 308 aa26.38■■□□□ 1.81
CDR2-202ENST00000561630 CNTNAP2Q9UHC6 1331 aa26.38■■□□□ 1.81
CDR2-202ENST00000561630 E9PMD0 336 aa26.37■■□□□ 1.81
CDR2-202ENST00000561630 B4GALT5O43286 388 aa26.37■■□□□ 1.81
CDR2-202ENST00000561630 HYIQ5T013 277 aa26.37■■□□□ 1.81
CDR2-202ENST00000561630 ZBTB8OSQ8IWT0 167 aa26.37■■□□□ 1.81
CDR2-202ENST00000561630 MRPS27Q92552 414 aaKnown RBP26.37■■□□□ 1.81
CDR2-202ENST00000561630 KIFAP3Q92845 792 aa26.37■■□□□ 1.81
CDR2-202ENST00000561630 UHRF1Q96T88 793 aaPredicted RBP26.37■■□□□ 1.81
CDR2-202ENST00000561630 EIF2AQ9BY44 585 aaKnown RBP26.37■■□□□ 1.81
CDR2-202ENST00000561630 C2orf40Q9H1Z8 148 aa26.37■■□□□ 1.81
CDR2-202ENST00000561630 FZD8Q9H461 694 aa26.37■■□□□ 1.81
CDR2-202ENST00000561630 RSAD1Q9HA92 442 aa26.37■■□□□ 1.81
CDR2-202ENST00000561630 CLDND1Q9NY35 253 aa26.37■■□□□ 1.81
CDR2-202ENST00000561630 PUF60Q9UHX1 559 aaKnown RBP26.37■■□□□ 1.81
CDR2-202ENST00000561630 INPP5FQ9Y2H2 1132 aa26.37■■□□□ 1.81
CDR2-202ENST00000561630 IPPQ9Y573 584 aa26.37■■□□□ 1.81
CDR2-202ENST00000561630 BMP15O95972 392 aa26.36■■□□□ 1.81
CDR2-202ENST00000561630 SYT1P21579 422 aa26.36■■□□□ 1.81
CDR2-202ENST00000561630 NAMPTP43490 491 aa26.36■■□□□ 1.81
CDR2-202ENST00000561630 ALDH7A1P49419 539 aaKnown RBP26.36■■□□□ 1.81
CDR2-202ENST00000561630 BCAR1P56945 870 aa26.36■■□□□ 1.81
CDR2-202ENST00000561630 KRT17Q04695 432 aa26.36■■□□□ 1.81
CDR2-202ENST00000561630 PPP2R5AQ15172 486 aa26.36■■□□□ 1.81
CDR2-202ENST00000561630 PDE12Q6L8Q7 609 aaKnown RBP26.36■■□□□ 1.81
CDR2-202ENST00000561630 PPP4R3CPQ6ZMV5 832 aa26.36■■□□□ 1.81
CDR2-202ENST00000561630 SLC39A11Q8N1S5 342 aa26.36■■□□□ 1.81
CDR2-202ENST00000561630 KCTD17Q8N5Z5 321 aa26.36■■□□□ 1.81
CDR2-202ENST00000561630 MICAL1Q8TDZ2 1067 aa26.36■■□□□ 1.81
CDR2-202ENST00000561630 PRIMPOLQ96LW4 560 aa26.36■■□□□ 1.81
CDR2-202ENST00000561630 UBN1Q9NPG3 1134 aa26.36■■□□□ 1.81
CDR2-202ENST00000561630 PRMT7Q9NVM4 692 aaPredicted RBP26.36■■□□□ 1.81
CDR2-202ENST00000561630 A0A1B0GUA9 196 aa26.35■■□□□ 1.81
CDR2-202ENST00000561630 CARNS1A5YM72 827 aa26.35■■□□□ 1.81
CDR2-202ENST00000561630 GTF2F1P35269 517 aaKnown RBP eCLIP26.35■■□□□ 1.81
CDR2-202ENST00000561630 LTBRP36941 435 aa26.35■■□□□ 1.81
CDR2-202ENST00000561630 ERVFC1P60507 584 aa26.35■■□□□ 1.81
CDR2-202ENST00000561630 FAM187BQ17R55 369 aa26.35■■□□□ 1.81
CDR2-202ENST00000561630 KCNK18Q7Z418 384 aa26.35■■□□□ 1.81
CDR2-202ENST00000561630 ADGRD2Q7Z7M1 963 aa26.35■■□□□ 1.81
CDR2-202ENST00000561630 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.35■■□□□ 1.81
CDR2-202ENST00000561630 URGCPQ8TCY9 931 aa26.35■■□□□ 1.81
CDR2-202ENST00000561630 IGFLR1Q9H665 355 aa26.35■■□□□ 1.81
CDR2-202ENST00000561630 PCDHGC5Q9Y5F6 944 aa26.35■■□□□ 1.81
CDR2-202ENST00000561630 NCOR1O75376 2440 aa26.34■■□□□ 1.81
CDR2-202ENST00000561630 H3BQ06 376 aaPredicted RBP26.34■■□□□ 1.81
CDR2-202ENST00000561630 FSCN2O14926 492 aa26.34■■□□□ 1.81
CDR2-202ENST00000561630 ZC3H11AO75152 810 aaKnown RBP eCLIP26.34■■□□□ 1.81
CDR2-202ENST00000561630 ITGA4P13612 1032 aa26.34■■□□□ 1.81
CDR2-202ENST00000561630 RNASELQ05823 741 aaKnown RBP26.34■■□□□ 1.81
CDR2-202ENST00000561630 EP400NLQ6ZTU2 488 aa26.34■■□□□ 1.81
CDR2-202ENST00000561630 DEPTORQ8TB45 409 aa26.34■■□□□ 1.81
CDR2-202ENST00000561630 SNX21Q969T3 373 aa26.34■■□□□ 1.81
CDR2-202ENST00000561630 IFT74Q96LB3 600 aa26.34■■□□□ 1.81
CDR2-202ENST00000561630 AK8Q96MA6 479 aa26.34■■□□□ 1.81
CDR2-202ENST00000561630 NT5C3AQ9H0P0 336 aa26.34■■□□□ 1.81
CDR2-202ENST00000561630 RNF39Q9H2S5 420 aa26.34■■□□□ 1.81
CDR2-202ENST00000561630 NRDE2Q9H7Z3 1164 aa26.34■■□□□ 1.81
CDR2-202ENST00000561630 POLD4Q9HCU8 107 aa26.34■■□□□ 1.81
CDR2-202ENST00000561630 KANSL3Q9P2N6 904 aa26.34■■□□□ 1.81
CDR2-202ENST00000561630 AFF1P51825 1210 aaKnown RBP26.33■■□□□ 1.81
CDR2-202ENST00000561630 ADAM15Q13444 863 aa26.33■■□□□ 1.81
CDR2-202ENST00000561630 ZRSR1Q15695 479 aaKnown RBP26.33■■□□□ 1.81
CDR2-202ENST00000561630 SLC27A1Q6PCB7 646 aa26.33■■□□□ 1.81
CDR2-202ENST00000561630 PNMA5Q96PV4 448 aa26.33■■□□□ 1.81
CDR2-202ENST00000561630 RUSC1Q9BVN2 902 aa26.33■■□□□ 1.81
CDR2-202ENST00000561630 TRIM6Q9C030 488 aaPredicted RBP26.33■■□□□ 1.81
CDR2-202ENST00000561630 CCDC113Q9H0I3 377 aa26.33■■□□□ 1.81
CDR2-202ENST00000561630 NT5C1B-RDH14C9J2C7 533 aa26.32■■□□□ 1.8
CDR2-202ENST00000561630 INPPL1O15357 1258 aa26.32■■□□□ 1.8
CDR2-202ENST00000561630 NRIP1P48552 1158 aa26.32■■□□□ 1.8
CDR2-202ENST00000561630 SF3A1Q15459 793 aaKnown RBP26.32■■□□□ 1.8
CDR2-202ENST00000561630 MAPK6Q16659 721 aa26.32■■□□□ 1.8
CDR2-202ENST00000561630 PUS10Q3MIT2 529 aaKnown RBP26.32■■□□□ 1.8
CDR2-202ENST00000561630 RINT1Q6NUQ1 792 aa26.32■■□□□ 1.8
CDR2-202ENST00000561630 C1orf186Q6ZWK4 172 aa26.32■■□□□ 1.8
CDR2-202ENST00000561630 ZNF280BQ86YH2 543 aa26.32■■□□□ 1.8
CDR2-202ENST00000561630 EFHBQ8N7U6 833 aa26.32■■□□□ 1.8
CDR2-202ENST00000561630 NECAB3Q96P71 396 aaPredicted RBP26.32■■□□□ 1.8
CDR2-202ENST00000561630 TCF25Q9BQ70 676 aa26.32■■□□□ 1.8
CDR2-202ENST00000561630 TLE6Q9H808 572 aa26.32■■□□□ 1.8
CDR2-202ENST00000561630 NGRNQ9NPE2 291 aaKnown RBP26.32■■□□□ 1.8
CDR2-202ENST00000561630 HES2Q9Y543 173 aa26.32■■□□□ 1.8
CDR2-202ENST00000561630 TNFRSF10AO00220 468 aa26.31■■□□□ 1.8
CDR2-202ENST00000561630 ACKR2O00590 384 aa26.31■■□□□ 1.8
CDR2-202ENST00000561630 LINC01565O15544 149 aa26.31■■□□□ 1.8
CDR2-202ENST00000561630 SLC26A4O43511 780 aa26.31■■□□□ 1.8
CDR2-202ENST00000561630 GALTP07902 379 aa26.31■■□□□ 1.8
CDR2-202ENST00000561630 EFNA5P52803 228 aa26.31■■□□□ 1.8
CDR2-202ENST00000561630 RESTQ13127 1097 aa26.31■■□□□ 1.8
CDR2-202ENST00000561630 RBM23Q86U06 439 aaKnown RBP26.31■■□□□ 1.8
CDR2-202ENST00000561630 CDR2LQ86X02 465 aaPredicted RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms