RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 SFI1A8K8P3 1242 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 PDXKO00764 312 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 N4BP3O15049 544 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 CALUO43852 315 aaPredicted RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 LGR5O75473 907 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 PRPF6O94906 941 aaKnown RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 OATP04181 439 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 MAPTP10636 758 aaKnown RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 PLS3P13797 630 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 AKR1A1P14550 325 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 MYOGP15173 224 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 ATP4AP20648 1035 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 MSNP26038 577 aaKnown RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 NMT1P30419 496 aaKnown RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 MTIF2P46199 727 aaKnown RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 FKBP3Q00688 224 aaKnown RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 LRMPQ12912 555 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 ALCAMQ13740 583 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 TTLL4Q14679 1199 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 ARID5BQ14865 1188 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 PTPN21Q16825 1174 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 KNOP1Q1ED39 458 aaKnown RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 FAM160B1Q5W0V3 765 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 ASTLQ6HA08 431 aaPredicted RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 ARMCX5Q6P1M9 558 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 MAMDC4Q6UXC1 1216 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 STXBP4Q6ZWJ1 553 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 ZNF720Q7Z2F6 126 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 LRRC8AQ8IWT6 810 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 HOMEZQ8IX15 550 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 FAM178BQ8IXR5 827 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 SP7Q8TDD2 431 aaPredicted RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 AFAP1L1Q8TED9 768 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 SCFD2Q8WU76 684 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 CACTINQ8WUQ7 758 aaKnown RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 CEP170P1Q96L14 293 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 PCYT2Q99447 389 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 GPR20Q99678 358 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 SH2D3AQ9BRG2 576 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 TUBGCP2Q9BSJ2 902 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 TSEN34Q9BSV6 310 aaKnown RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 STRA6Q9BX79 667 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 KATNBL1Q9H079 304 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 VPS16Q9H269 839 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 CD320Q9NPF0 282 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 IL23AQ9NPF7 189 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 TYW1Q9NV66 732 aaKnown RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 LARSQ9P2J5 1176 aaKnown RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 SEPT9Q9UHD8 586 aaPredicted RBP8.26□□□□□ -1.09
TPM1-231ENST00000561395 TRAF3IP3Q9Y228 551 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 MTCH2Q9Y6C9 303 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 CFAP54Q96N23 3096 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 USP34Q70CQ2 3546 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 ITIH6Q6UXX5 1313 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 TET1Q8NFU7 2136 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 KMT2EQ8IZD2 1858 aa8.26□□□□□ -1.09
TPM1-231ENST00000561395 ATG2AQ2TAZ0 1938 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 MOXD2PA6NHM9 499 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 K7ENM7 598 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 RFXAPO00287 272 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 DGAT1O75907 488 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 GNA14O95837 355 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 TPM2P07951 284 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 TXNP10599 105 aaKnown RBP8.25□□□□□ -1.09
TPM1-231ENST00000561395 POU3F3P20264 500 aaPredicted RBP8.25□□□□□ -1.09
TPM1-231ENST00000561395 SFPQP23246 707 aaKnown RBP eCLIP8.25□□□□□ -1.09
TPM1-231ENST00000561395 TCF7P36402 384 aaPredicted RBP8.25□□□□□ -1.09
TPM1-231ENST00000561395 NCKAP1LP55160 1127 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 MARSP56192 900 aaKnown RBP8.25□□□□□ -1.09
TPM1-231ENST00000561395 CCZ1BP86790 482 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 CCZ1P86791 482 aaPredicted RBP8.25□□□□□ -1.09
TPM1-231ENST00000561395 UBXN1Q04323 297 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 NFIL3Q16649 462 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 ZC2HC1CQ53FD0 456 aaPredicted RBP8.25□□□□□ -1.09
TPM1-231ENST00000561395 MIIPQ5JXC2 388 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 TAPT1Q6NXT6 567 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 MAEAQ7L5Y9 396 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 OTOP2Q7RTS6 562 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 DHX37Q8IY37 1157 aaKnown RBP8.25□□□□□ -1.09
TPM1-231ENST00000561395 MCPH1Q8NEM0 835 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 SEPT1Q8WYJ6 367 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 KIFAP3Q92845 792 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 HLA-CQ95604 372 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 EEF2KMTQ96G04 330 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 ST6GALNAC4Q9H4F1 302 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 MLXIPQ9HAP2 919 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 ATP6V0A4Q9HBG4 840 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 SPC25Q9HBM1 224 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 GPRC5CQ9NQ84 441 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 RRAGDQ9NQL2 400 aaPredicted RBP8.25□□□□□ -1.09
TPM1-231ENST00000561395 CYP26B1Q9NR63 512 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 PDGFCQ9NRA1 345 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.25□□□□□ -1.09
TPM1-231ENST00000561395 PYCARDQ9ULZ3 195 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 TRIOO75962 3097 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 EMSYQ7Z589 1322 aa8.25□□□□□ -1.09
TPM1-231ENST00000561395 SPTBN4Q9H254 2564 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 NLRC5Q86WI3 1866 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 A0A1W2PQC6 194 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 NOP56O00567 594 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms