RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 DNAJC19Q96DA6 116 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 CALML4Q96GE6 196 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 PAGE5Q96GU1 130 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 ZNF333Q96JL9 665 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 FAM167AQ96KS9 214 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 C7orf25Q9BPX7 421 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 LXNQ9BS40 222 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 GRIP2Q9C0E4 1043 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 AP5M1Q9H0R1 490 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 TNMDQ9H2S6 317 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 CLSTN2Q9H4D0 955 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 ZNF302Q9NR11 478 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 KCND2Q9NZV8 630 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 GABBR1Q9UBS5 961 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 TUBE1Q9UJT0 475 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 OGDHLQ9ULD0 1010 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 KIAA1024Q9UPX6 916 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 DNM3Q9UQ16 869 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 KIAA0100Q14667 2235 aaKnown RBP6.09□□□□□ -1.43
ZEB1-220ENST00000560909 SYNRGQ9UMZ2 1314 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 MBLAC1A4D2B0 266 aaPredicted RBP6.09□□□□□ -1.43
ZEB1-220ENST00000560909 H3BRB1 525 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 ERVH48-1M5A8F1 160 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 DDX39AO00148 427 aaKnown RBP6.09□□□□□ -1.43
ZEB1-220ENST00000560909 NOP56O00567 594 aaKnown RBP6.09□□□□□ -1.43
ZEB1-220ENST00000560909 ZBTB39O15060 712 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 CHMP2AO43633 222 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 HBP1O60381 514 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 CABYRO75952 493 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 GJB1P08034 283 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 PLA2G4BP0C869 781 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 SELPP16109 830 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 CYP11B2P19099 503 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 GUCY2CP25092 1073 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 YWHABP31946 246 aaKnown RBP6.09□□□□□ -1.43
ZEB1-220ENST00000560909 RARRES1P49788 294 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 ZNF131P52739 623 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 PURAQ00577 322 aaKnown RBP6.09□□□□□ -1.43
ZEB1-220ENST00000560909 CYP4A11Q02928 519 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 EHHADHQ08426 723 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 DPYDQ12882 1025 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 PLCB4Q15147 1175 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 LRRC41Q15345 812 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 BRDTQ58F21 947 aaPredicted RBP6.09□□□□□ -1.43
ZEB1-220ENST00000560909 SESTD1Q86VW0 696 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 TPH2Q8IWU9 490 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 LINC01465Q8N7H1 131 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 SLC43A3Q8NBI5 491 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 BANK1Q8NDB2 785 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 SH3TC2Q8TF17 1288 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 LARP4BQ92615 738 aaKnown RBP6.09□□□□□ -1.43
ZEB1-220ENST00000560909 LENG1Q96BZ8 264 aaPredicted RBP6.09□□□□□ -1.43
ZEB1-220ENST00000560909 DHX58Q96C10 678 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 PCMTD1Q96MG8 357 aaPredicted RBP6.09□□□□□ -1.43
ZEB1-220ENST00000560909 ARHGAP9Q9BRR9 750 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 TIPINQ9BVW5 301 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 SEZ6LQ9BYH1 1024 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 PANK2Q9BZ23 570 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 TRIM9Q9C026 710 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.09□□□□□ -1.43
ZEB1-220ENST00000560909 TUT1Q9H6E5 874 aaKnown RBP6.09□□□□□ -1.43
ZEB1-220ENST00000560909 DHX33Q9H6R0 707 aaKnown RBP6.09□□□□□ -1.43
ZEB1-220ENST00000560909 RUBCNLQ9H714 662 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 XPNPEP3Q9NQH7 507 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 NRBP2Q9NSY0 501 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 ERAP1Q9NZ08 941 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 TMEM63CQ9P1W3 806 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 TCEAL9Q9UHQ7 104 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 SERTAD1Q9UHV2 236 aa6.09□□□□□ -1.43
ZEB1-220ENST00000560909 BRCA2P51587 3418 aa6.09□□□□□ -1.44
ZEB1-220ENST00000560909 COL1A2P08123 1366 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 GRIN2DO15399 1336 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 PVALEFA0A1B0GWK0 134 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 A0A1W2PRU2 124 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 MYADML2A6NDP7 307 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 MYMKA6NI61 221 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 E9PMD0 336 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 BACH1O14867 736 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 KLRC4O43908 158 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 ZEB2O60315 1214 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 KINO60870 393 aaKnown RBP6.08□□□□□ -1.44
ZEB1-220ENST00000560909 MAFO75444 373 aaPredicted RBP6.08□□□□□ -1.44
ZEB1-220ENST00000560909 PGK1P00558 417 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 CCL5P13501 91 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 STAT6P42226 847 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 RTP1P59025 263 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 AMPD3Q01432 767 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 PRKCEQ02156 737 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 MAPK7Q13164 816 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 MCM6Q14566 821 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 KCNB1Q14721 858 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 MTFR1Q15390 333 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 SLC9C1Q4G0N8 1177 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 ZNF484Q5JVG2 852 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 GNASQ5JWF2 1037 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 MARCH8Q5T0T0 291 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 CCDC183Q5T5S1 534 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 RINT1Q6NUQ1 792 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 SV2BQ7L1I2 683 aa6.08□□□□□ -1.44
ZEB1-220ENST00000560909 OTUD6AQ7L8S5 288 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms