RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 NRP1O14786 923 aa11.17□□□□□ -0.62
TPM1-225ENST00000560679 EDIL3O43854 480 aa11.17□□□□□ -0.62
TPM1-225ENST00000560679 ZNF623O75123 536 aa11.17□□□□□ -0.62
TPM1-225ENST00000560679 GLUD1P00367 558 aa11.17□□□□□ -0.62
TPM1-225ENST00000560679 LAMP2P13473 410 aa11.17□□□□□ -0.62
TPM1-225ENST00000560679 SFPQP23246 707 aaKnown RBP eCLIP11.17□□□□□ -0.62
TPM1-225ENST00000560679 AK2P54819 239 aa11.17□□□□□ -0.62
TPM1-225ENST00000560679 STARD6P59095 220 aa11.17□□□□□ -0.62
TPM1-225ENST00000560679 PRR16Q569H4 304 aa11.17□□□□□ -0.62
TPM1-225ENST00000560679 VARS2Q5ST30 1063 aaKnown RBP11.17□□□□□ -0.62
TPM1-225ENST00000560679 CYP26C1Q6V0L0 522 aa11.17□□□□□ -0.62
TPM1-225ENST00000560679 GET4Q7L5D6 327 aaPredicted RBP11.17□□□□□ -0.62
TPM1-225ENST00000560679 ZNF713Q8N859 430 aaPredicted RBP11.17□□□□□ -0.62
TPM1-225ENST00000560679 STAMQ92783 540 aa11.17□□□□□ -0.62
TPM1-225ENST00000560679 RPP25Q9BUL9 199 aaKnown RBP11.17□□□□□ -0.62
TPM1-225ENST00000560679 GCOM2Q9BZD3 368 aaPredicted RBP11.17□□□□□ -0.62
TPM1-225ENST00000560679 MRPL17Q9NRX2 175 aaKnown RBP11.17□□□□□ -0.62
TPM1-225ENST00000560679 CACNA1GO43497 2377 aa11.17□□□□□ -0.62
TPM1-225ENST00000560679 DOCK6Q96HP0 2047 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 MTCL1Q9Y4B5 1905 aaKnown RBP11.16□□□□□ -0.62
TPM1-225ENST00000560679 SLC27A2O14975 620 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 SPTLC1O15269 473 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 STBD1O95210 358 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 URODP06132 367 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 ADH1AP07327 375 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 SPATA31D3P0C874 917 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 SKIP12755 728 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 TGM1P22735 817 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 RAB27AP51159 221 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 AAMPQ13685 434 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 ZNF528Q3MIS6 628 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 KIAA0319Q5VV43 1072 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 SPATA31D4Q6ZUB0 917 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 KSR1Q8IVT5 923 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 URGCPQ8TCY9 931 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 SH2D3AQ9BRG2 576 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 TMEM175Q9BSA9 504 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 DDX23Q9BUQ8 820 aaKnown RBP11.16□□□□□ -0.62
TPM1-225ENST00000560679 LSG1Q9H089 658 aaKnown RBP11.16□□□□□ -0.62
TPM1-225ENST00000560679 RSAD1Q9HA92 442 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 RXFP1Q9HBX9 757 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 DISC1Q9NRI5 854 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 FAM217BQ9NTX9 383 aaPredicted RBP11.16□□□□□ -0.62
TPM1-225ENST00000560679 AGPAT5Q9NUQ2 364 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 RBM28Q9NW13 759 aaKnown RBP11.16□□□□□ -0.62
TPM1-225ENST00000560679 NCDNQ9UBB6 729 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 STK39Q9UEW8 545 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 TCEAL9Q9UHQ7 104 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 BRPF3Q9ULD4 1205 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 SMG5Q9UPR3 1016 aaKnown RBP11.16□□□□□ -0.62
TPM1-225ENST00000560679 PRG3Q9Y2Y8 225 aaPredicted RBP11.16□□□□□ -0.62
TPM1-225ENST00000560679 MTF2Q9Y483 593 aaPredicted RBP11.16□□□□□ -0.62
TPM1-225ENST00000560679 SAMM50Q9Y512 469 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 PCDHB2Q9Y5E7 798 aa11.16□□□□□ -0.62
TPM1-225ENST00000560679 V9GY48 417 aaPredicted RBP11.16□□□□□ -0.62
TPM1-225ENST00000560679 CHMP2AO43633 222 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 CIITAP33076 1130 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 RTN1Q16799 776 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 ST3GAL2Q16842 350 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 MTERF2Q49AM1 385 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 UBXN11Q5T124 520 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 PARM1Q6UWI2 310 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 CATSPER4Q7RTX7 472 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 MRPL10Q7Z7H8 261 aaKnown RBP11.15□□□□□ -0.62
TPM1-225ENST00000560679 ZNF410Q86VK4 478 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 ZBTB44Q8NCP5 570 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 NELL1Q92832 810 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 FGF14Q92915 247 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 GJA10Q969M2 543 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 NT5C3AQ9H0P0 336 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 GLT8D2Q9H1C3 349 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 EPC1Q9H2F5 836 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 UNC45AQ9H3U1 944 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 PARD6AQ9NPB6 346 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 NRBP2Q9NSY0 501 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.15□□□□□ -0.62
TPM1-225ENST00000560679 SEPT9Q9UHD8 586 aaPredicted RBP11.15□□□□□ -0.62
TPM1-225ENST00000560679 FBXO4Q9UKT5 387 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 FAN1Q9Y2M0 1017 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 PCDHGA2Q9Y5H1 932 aa11.15□□□□□ -0.62
TPM1-225ENST00000560679 FRYQ5TBA9 3013 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 BAHCC1Q9P281 2608 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 KANSL1LA0AUZ9 987 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 ESYT2A0FGR8 921 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 DCDC2BA2VCK2 349 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 MSH4O15457 936 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 TGM5O43548 720 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 POMCP01189 267 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 ADRB1P08588 477 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 CDC27P30260 824 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 GLUD2P49448 558 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 GPC5P78333 572 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 DSG1Q02413 1049 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 CSTF1Q05048 431 aaKnown RBP11.14□□□□□ -0.63
TPM1-225ENST00000560679 DSC1Q08554 894 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 SNW1Q13573 536 aaKnown RBP11.14□□□□□ -0.63
TPM1-225ENST00000560679 MLF2Q15773 248 aaPredicted RBP11.14□□□□□ -0.63
TPM1-225ENST00000560679 CREB3L3Q68CJ9 461 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 RHPN2Q8IUC4 686 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 COLGALT2Q8IYK4 626 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms