RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 CCDC134Q9H6E4 229 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 GPCPD1Q9NPB8 672 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 MTRF1LQ9UGC7 380 aaKnown RBP9.26□□□□□ -0.93
CCDC33-209ENST00000560565 TMEM59LQ9UK28 342 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 PTCH2Q9Y6C5 1203 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 KIAA1217Q5T5P2 1943 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 CEP290O15078 2479 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 hCG_1642624A0A1W2PR95 340 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 POTEFA5A3E0 1075 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 TRIM49BA6NDI0 452 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 SMCO2A6NFE2 343 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 O00370 1275 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 TNPO2O14787 897 aaKnown RBP9.25□□□□□ -0.93
CCDC33-209ENST00000560565 MGRN1O60291 552 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 PALMO75781 387 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 GGPS1O95749 300 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 ABL1P00519 1130 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 AGTP01019 485 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 KRT14P02533 472 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 NUDT17P0C025 328 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 VCAM1P19320 739 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 CARSP49589 748 aaKnown RBP9.25□□□□□ -0.93
CCDC33-209ENST00000560565 FXR2P51116 673 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC33-209ENST00000560565 PDE6CP51160 858 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 ADCY7P51828 1080 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 DRG2P55039 364 aaKnown RBP9.25□□□□□ -0.93
CCDC33-209ENST00000560565 GUCY1A3Q02108 690 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 KLHL30Q0D2K2 578 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 ZRSR2Q15696 482 aaKnown RBP9.25□□□□□ -0.93
CCDC33-209ENST00000560565 SKIDA1Q1XH10 827 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 EDRF1Q3B7T1 1238 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 NAALADL2Q58DX5 795 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 POTEEQ6S8J3 1075 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 CATSPERGQ6ZRH7 1159 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 KCTD1Q719H9 257 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 CEP57Q86XR8 500 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 CCDC65Q8IXS2 484 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 GSPT2Q8IYD1 628 aaKnown RBP9.25□□□□□ -0.93
CCDC33-209ENST00000560565 MYOCDQ8IZQ8 938 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 SAMD3Q8N6K7 520 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 GPRC5AQ8NFJ5 357 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 MORC4Q8TE76 937 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 GTF3C2Q8WUA4 911 aaPredicted RBP9.25□□□□□ -0.93
CCDC33-209ENST00000560565 CUL5Q93034 780 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 COA7Q96BR5 231 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 ARMC5Q96C12 935 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 SHISA4Q96DD7 197 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 INPP4AQ96PE3 977 aaPredicted RBP9.25□□□□□ -0.93
CCDC33-209ENST00000560565 RAB3IPQ96QF0 476 aaPredicted RBP9.25□□□□□ -0.93
CCDC33-209ENST00000560565 KRT12Q99456 494 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 AMNQ9BXJ7 453 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 TRIM7Q9C029 511 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 METTL14Q9HCE5 456 aaKnown RBP9.25□□□□□ -0.93
CCDC33-209ENST00000560565 FAM207AQ9NSI2 230 aaPredicted RBP9.25□□□□□ -0.93
CCDC33-209ENST00000560565 NOP53Q9NZM5 478 aaKnown RBP9.25□□□□□ -0.93
CCDC33-209ENST00000560565 SUCLA2Q9P2R7 463 aaPredicted RBP9.25□□□□□ -0.93
CCDC33-209ENST00000560565 DDX20Q9UHI6 824 aaKnown RBP9.25□□□□□ -0.93
CCDC33-209ENST00000560565 SLC12A6Q9UHW9 1150 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 MYPNQ86TC9 1320 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 A0A0G2JMZ2 1700 aa9.25□□□□□ -0.93
CCDC33-209ENST00000560565 RCCD1A6NED2 376 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 CCT8L1PA6NM43 557 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 MYO1FO00160 1098 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 PODXLO00592 558 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 CETN3O15182 167 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 KIF4AO95239 1232 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 GLI1P08151 1106 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 PLCG1P19174 1290 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 RFX1P22670 979 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 CCND1P24385 295 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 RPL13P26373 211 aaKnown RBP9.24□□□□□ -0.93
CCDC33-209ENST00000560565 CASP1P29466 404 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 HSD17B3P37058 310 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 SKIV2L2P42285 1042 aaKnown RBP9.24□□□□□ -0.93
CCDC33-209ENST00000560565 SCTRP47872 440 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 SLC7A5Q01650 507 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 PRKCZQ05513 592 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 QRICH1Q2TAL8 776 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 KRT71Q3SY84 523 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 KCTD16Q68DU8 428 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 TTBK2Q6IQ55 1244 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 FBXO11Q86XK2 927 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.24□□□□□ -0.93
CCDC33-209ENST00000560565 REXO1Q8N1G1 1221 aaKnown RBP9.24□□□□□ -0.93
CCDC33-209ENST00000560565 CCDC63Q8NA47 563 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 SCFD2Q8WU76 684 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 UBLCP1Q8WVY7 318 aaPredicted RBP9.24□□□□□ -0.93
CCDC33-209ENST00000560565 SEC14L1Q92503 715 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 BAP1Q92560 729 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 LARP4BQ92615 738 aaKnown RBP9.24□□□□□ -0.93
CCDC33-209ENST00000560565 STAMQ92783 540 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 GPKOWQ92917 476 aaPredicted RBP eCLIP9.24□□□□□ -0.93
CCDC33-209ENST00000560565 GRAMD1AQ96CP6 724 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 HVCN1Q96D96 273 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 TMEM109Q9BVC6 243 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 TMEM106CQ9BVX2 250 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 PLVAPQ9BX97 442 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 ROPN1BQ9BZX4 212 aaPredicted RBP9.24□□□□□ -0.93
CCDC33-209ENST00000560565 MAF1Q9H063 256 aa9.24□□□□□ -0.93
CCDC33-209ENST00000560565 RANBP17Q9H2T7 1088 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms