RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 HACE1Q8IYU2 909 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 SP7Q8TDD2 431 aaPredicted RBP15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 ZNF668Q96K58 619 aaPredicted RBP15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 YME1L1Q96TA2 773 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 REEP2Q9BRK0 252 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 MINDY3Q9H8M7 445 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 SLC28A3Q9HAS3 691 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 RWDD3Q9Y3V2 267 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 MYH11P35749 1972 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 A0A1B0GUA9 196 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 GOLGA6L4A6NEF3 574 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 CCDC169A6NNP5 214 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 K7ERI5 159 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 MGEA5O60502 916 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 TSPAN1O60635 241 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 GADD45BO75293 160 aaPredicted RBP15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 DGKIO75912 1065 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 GAP43P17677 238 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 GIT2Q14161 759 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 AMHR2Q16671 573 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 CMTR2Q8IYT2 770 aaKnown RBP15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 PDILTQ8N807 584 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 LRRC15Q8TF66 581 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 BSNDQ8WZ55 320 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 DDX12PQ92771 950 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 PGBD4Q96DM1 585 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 SAMD11Q96NU1 681 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 CCDC113Q9H0I3 377 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 UBN1Q9NPG3 1134 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 FAM105AQ9NUU6 356 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 ZMYM2Q9UBW7 1377 aa15.41■□□□□ 0.06
PKNOX1-209ENST00000560448 LAMA3Q16787 3333 aa15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 PTPRSQ13332 1948 aa15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 A0A087X0B3 334 aa15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 N4BP3O15049 544 aa15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 POLR2DO15514 142 aaKnown RBP15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 HOXA11P31270 313 aaPredicted RBP15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 NCKAP1LP55160 1127 aa15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 PRPF4BQ13523 1007 aaKnown RBP15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 SLC27A1Q6PCB7 646 aa15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 ECHDC2Q86YB7 292 aa15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 CEP57L1Q8IYX8 460 aa15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 DHX58Q96C10 678 aa15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 ZNF689Q96CS4 500 aaPredicted RBP15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 ADPGKQ9BRR6 497 aa15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 ST6GALNAC4Q9H4F1 302 aa15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 RC3H2Q9HBD1 1191 aaKnown RBP15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 OLFML3Q9NRN5 406 aa15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 HPSEQ9Y251 543 aa15.4■□□□□ 0.06
PKNOX1-209ENST00000560448 ADGRA3Q8IWK6 1321 aa15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 SOX1O00570 391 aaPredicted RBP15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 CSDE1O75534 798 aaKnown RBP15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 PRKCBP05771 671 aa15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 SLFN14P0C7P3 912 aa15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 ARF4P18085 180 aaPredicted RBP15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 FGFR4P22455 802 aa15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 STRN3Q13033 797 aa15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 ALCAMQ13740 583 aa15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 DHX8Q14562 1220 aaKnown RBP15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 PPP2R2DQ66LE6 453 aa15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 FAM178BQ8IXR5 827 aa15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 MYCT1Q8N699 235 aa15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 TMEM161BQ8NDZ6 487 aa15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 MRPS27Q92552 414 aaKnown RBP15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 HVCN1Q96D96 273 aa15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 MRPL4Q9BYD3 311 aaKnown RBP15.39■□□□□ 0.05
PKNOX1-209ENST00000560448 FRMD3A2A2Y4 597 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 GRXCR1A8MXD5 290 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 UPP2O95045 317 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 PFKFB1P16118 471 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 SYKP43405 635 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 DCAF4L1Q3SXM0 396 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 CAVIN1Q6NZI2 390 aaKnown RBP15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 ZPBP2Q6X784 338 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 MRPL10Q7Z7H8 261 aaKnown RBP15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 ZNF598Q86UK7 904 aaKnown RBP15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 CCDC65Q8IXS2 484 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 ABI1Q8IZP0 508 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 DNAJC19Q96DA6 116 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 LRCH3Q96II8 777 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 MRPL9Q9BYD2 267 aaKnown RBP15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 PANK2Q9BZ23 570 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 TRIM9Q9C026 710 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 TRIM6Q9C030 488 aaPredicted RBP15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 TMEM117Q9H0C3 514 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 TNFSF13BQ9Y275 285 aa15.38■□□□□ 0.05
PKNOX1-209ENST00000560448 GBF1Q92538 1859 aa15.37■□□□□ 0.05
PKNOX1-209ENST00000560448 MYMKA6NI61 221 aa15.37■□□□□ 0.05
PKNOX1-209ENST00000560448 CA3P07451 260 aa15.37■□□□□ 0.05
PKNOX1-209ENST00000560448 PBX2P40425 430 aa15.37■□□□□ 0.05
PKNOX1-209ENST00000560448 RABGGTBP53611 331 aa15.37■□□□□ 0.05
PKNOX1-209ENST00000560448 ZNF445P59923 1031 aa15.37■□□□□ 0.05
PKNOX1-209ENST00000560448 UBE2HP62256 183 aa15.37■□□□□ 0.05
PKNOX1-209ENST00000560448 RAD51AP2Q09MP3 1159 aa15.37■□□□□ 0.05
PKNOX1-209ENST00000560448 KANK3Q6NY19 840 aa15.37■□□□□ 0.05
PKNOX1-209ENST00000560448 STXBP4Q6ZWJ1 553 aa15.37■□□□□ 0.05
PKNOX1-209ENST00000560448 HAUS6Q7Z4H7 955 aa15.37■□□□□ 0.05
PKNOX1-209ENST00000560448 C7orf25Q9BPX7 421 aa15.37■□□□□ 0.05
PKNOX1-209ENST00000560448 ZNF576Q9H609 170 aa15.37■□□□□ 0.05
PKNOX1-209ENST00000560448 TMEM63CQ9P1W3 806 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms