RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 DBR1Q9UK59 544 aaKnown RBP15.65■□□□□ 0.1
TPM1-223ENST00000560445 INPP5FQ9Y2H2 1132 aa15.65■□□□□ 0.1
TPM1-223ENST00000560445 C19orf67A6NJJ6 358 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 LAD1O00515 517 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 ATP2B1P20020 1258 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 MCM2P49736 904 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 RARRES1P49788 294 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 PTENP60484 403 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 ERVFC1P60507 584 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 TTC38Q5R3I4 469 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 LRRC55Q6ZSA7 311 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 MRPL10Q7Z7H8 261 aaKnown RBP15.64■□□□□ 0.09
TPM1-223ENST00000560445 PPFIBP1Q86W92 1011 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 ZBTB8OSQ8IWT0 167 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 PRIMPOLQ96LW4 560 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 C2orf40Q9H1Z8 148 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 BMP2KQ9NSY1 1161 aaPredicted RBP15.64■□□□□ 0.09
TPM1-223ENST00000560445 DZANK1Q9NVP4 752 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 SSX2IPQ9Y2D8 614 aa15.64■□□□□ 0.09
TPM1-223ENST00000560445 ARHGEF35A5YM69 484 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 PRR33A8MZF0 331 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 RBAK-RBAKDNI3L0D1 243 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 LINC01565O15544 149 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 ITGA4P13612 1032 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 NCLP19338 710 aaKnown RBP15.63■□□□□ 0.09
TPM1-223ENST00000560445 RPA1P27694 616 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 CA8P35219 290 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 GTF2F1P35269 517 aaKnown RBP eCLIP15.63■□□□□ 0.09
TPM1-223ENST00000560445 DLX2Q07687 328 aaPredicted RBP15.63■□□□□ 0.09
TPM1-223ENST00000560445 PPP2R5AQ15172 486 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 CES5AQ6NT32 575 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 APBB1IPQ7Z5R6 666 aaPredicted RBP15.63■□□□□ 0.09
TPM1-223ENST00000560445 DDX53Q86TM3 631 aaKnown RBP15.63■□□□□ 0.09
TPM1-223ENST00000560445 MRPL43Q8N983 215 aaKnown RBP15.63■□□□□ 0.09
TPM1-223ENST00000560445 NECTIN4Q96NY8 510 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 PHF7Q9BWX1 381 aaPredicted RBP15.63■□□□□ 0.09
TPM1-223ENST00000560445 EPHX3Q9H6B9 360 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 TBC1D13Q9NVG8 400 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 CLEC1BQ9P126 229 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 DPP7Q9UHL4 492 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 IRAK3Q9Y616 596 aa15.63■□□□□ 0.09
TPM1-223ENST00000560445 POTEMA6NI47 508 aa15.62■□□□□ 0.09
TPM1-223ENST00000560445 OFD1O75665 1012 aa15.62■□□□□ 0.09
TPM1-223ENST00000560445 ALDH2P05091 517 aa15.62■□□□□ 0.09
TPM1-223ENST00000560445 GUCY1B3Q02153 619 aa15.62■□□□□ 0.09
TPM1-223ENST00000560445 ITIH3Q06033 890 aa15.62■□□□□ 0.09
TPM1-223ENST00000560445 ZNF579Q8NAF0 562 aaKnown RBP15.62■□□□□ 0.09
TPM1-223ENST00000560445 IGSF21Q96ID5 467 aa15.62■□□□□ 0.09
TPM1-223ENST00000560445 EMILIN2Q9BXX0 1053 aa15.62■□□□□ 0.09
TPM1-223ENST00000560445 CSRNP2Q9H175 543 aa15.62■□□□□ 0.09
TPM1-223ENST00000560445 POLR3FQ9H1D9 316 aaPredicted RBP15.62■□□□□ 0.09
TPM1-223ENST00000560445 PRMT7Q9NVM4 692 aaPredicted RBP15.62■□□□□ 0.09
TPM1-223ENST00000560445 HCSTQ9UBK5 93 aa15.62■□□□□ 0.09
TPM1-223ENST00000560445 BARX2Q9UMQ3 279 aaPredicted RBP15.62■□□□□ 0.09
TPM1-223ENST00000560445 USP15Q9Y4E8 981 aaPredicted RBP15.62■□□□□ 0.09
TPM1-223ENST00000560445 PHLPP2Q6ZVD8 1323 aa15.62■□□□□ 0.09
TPM1-223ENST00000560445 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.61■□□□□ 0.09
TPM1-223ENST00000560445 PER2O15055 1255 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 TSPAN1O60635 241 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 USO1O60763 962 aaKnown RBP15.61■□□□□ 0.09
TPM1-223ENST00000560445 GLP2RO95838 553 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 ARL2P36404 184 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 TECP42680 631 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 FXR2P51116 673 aaKnown RBP eCLIP15.61■□□□□ 0.09
TPM1-223ENST00000560445 CAPSQ13938 189 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 TMEM132AQ24JP5 1023 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 ANKRD54Q6NXT1 300 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 SLC27A1Q6PCB7 646 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 VPS52Q8N1B4 723 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 LPPQ93052 612 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 LRFN3Q9BTN0 628 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 XPNPEP1Q9NQW7 623 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 GIT1Q9Y2X7 761 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 NR2E1Q9Y466 385 aa15.61■□□□□ 0.09
TPM1-223ENST00000560445 C2orf71A6NGG8 1288 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 LRRIQ4A6NIV6 560 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 INPPL1O15357 1258 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 CXCL14O95715 111 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 GALTP07902 379 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 CTSAP10619 480 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 HOXA11P31270 313 aaPredicted RBP15.6■□□□□ 0.09
TPM1-223ENST00000560445 PBX3P40426 434 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 MBTD1Q05BQ5 628 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 ST3GAL1Q11201 340 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 PDIA5Q14554 519 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 CBX2Q14781 532 aaPredicted RBP15.6■□□□□ 0.09
TPM1-223ENST00000560445 ZNF174Q15697 407 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 C8orf34Q49A92 452 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 HERC4Q5GLZ8 1057 aaPredicted RBP15.6■□□□□ 0.09
TPM1-223ENST00000560445 CATSPER3Q86XQ3 398 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 KCTD17Q8N5Z5 321 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 PIGOQ8TEQ8 1089 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 KIFAP3Q92845 792 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 IFT74Q96LB3 600 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 RIPOR3Q96MK2 946 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 GBP3Q9H0R5 595 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 ZBP1Q9H171 429 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 TMEM60Q9H2L4 133 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 NRDE2Q9H7Z3 1164 aa15.6■□□□□ 0.09
TPM1-223ENST00000560445 MINDY3Q9H8M7 445 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms