RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 HELQQ8TDG4 1101 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 ASAP3Q8TDY4 903 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 POF1BQ8WVV4 589 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 LPPQ93052 612 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 CCDC43Q96MW1 224 aaKnown RBP16.36■□□□□ 0.21
IDH3A-219ENST00000560414 UHRF1Q96T88 793 aaPredicted RBP16.36■□□□□ 0.21
IDH3A-219ENST00000560414 TUFT1Q9NNX1 390 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 KIF3AQ9Y496 699 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 PCDHB12Q9Y5F1 795 aa16.36■□□□□ 0.21
IDH3A-219ENST00000560414 ASAP2O43150 1006 aa16.35■□□□□ 0.21
IDH3A-219ENST00000560414 USO1O60763 962 aaKnown RBP16.35■□□□□ 0.21
IDH3A-219ENST00000560414 DGAT1O75907 488 aa16.35■□□□□ 0.21
IDH3A-219ENST00000560414 EOMESO95936 686 aa16.35■□□□□ 0.21
IDH3A-219ENST00000560414 XRCC6P12956 609 aaKnown RBP eCLIP16.35■□□□□ 0.21
IDH3A-219ENST00000560414 GTF2F1P35269 517 aaKnown RBP eCLIP16.35■□□□□ 0.21
IDH3A-219ENST00000560414 PBX3P40426 434 aa16.35■□□□□ 0.21
IDH3A-219ENST00000560414 MCM2P49736 904 aa16.35■□□□□ 0.21
IDH3A-219ENST00000560414 POTEGQ6S5H5 508 aa16.35■□□□□ 0.21
IDH3A-219ENST00000560414 MAEAQ7L5Y9 396 aa16.35■□□□□ 0.21
IDH3A-219ENST00000560414 POLR3CQ9BUI4 534 aaPredicted RBP16.35■□□□□ 0.21
IDH3A-219ENST00000560414 AAASQ9NRG9 546 aa16.35■□□□□ 0.21
IDH3A-219ENST00000560414 AGPAT5Q9NUQ2 364 aa16.35■□□□□ 0.21
IDH3A-219ENST00000560414 FAM105AQ9NUU6 356 aa16.35■□□□□ 0.21
IDH3A-219ENST00000560414 PCDHGC5Q9Y5F6 944 aa16.35■□□□□ 0.21
IDH3A-219ENST00000560414 ARID2Q68CP9 1835 aa16.35■□□□□ 0.21
IDH3A-219ENST00000560414 MEIS3P2A8K0S8 358 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 H3BQ06 376 aaPredicted RBP16.34■□□□□ 0.21
IDH3A-219ENST00000560414 FGF18O76093 207 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 RPA1P27694 616 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 HOXA11P31270 313 aaPredicted RBP16.34■□□□□ 0.21
IDH3A-219ENST00000560414 ARL2P36404 184 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 HYAL1Q12794 435 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 CAPSQ13938 189 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 MXD4Q14582 209 aaPredicted RBP16.34■□□□□ 0.21
IDH3A-219ENST00000560414 ECM1Q16610 540 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 ADGRD2Q7Z7M1 963 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 THNSL1Q8IYQ7 743 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 ERMNQ8TAM6 284 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 PABPC5Q96DU9 382 aaKnown RBP16.34■□□□□ 0.21
IDH3A-219ENST00000560414 HS3ST6Q96QI5 342 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 NACC1Q96RE7 527 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 TRAIPQ9BWF2 469 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 IGFLR1Q9H665 355 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 GPRC5CQ9NQ84 441 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 CLDND1Q9NY35 253 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 SMC3Q9UQE7 1217 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 ATG2AQ2TAZ0 1938 aa16.34■□□□□ 0.21
IDH3A-219ENST00000560414 H3BQV1 296 aa16.33■□□□□ 0.2
IDH3A-219ENST00000560414 ARHGAP33O14559 1287 aa16.33■□□□□ 0.2
IDH3A-219ENST00000560414 TRIM66O15016 1216 aa16.33■□□□□ 0.2
IDH3A-219ENST00000560414 LAG3P18627 525 aa16.33■□□□□ 0.2
IDH3A-219ENST00000560414 GLRA2P23416 452 aa16.33■□□□□ 0.2
IDH3A-219ENST00000560414 PTENP60484 403 aa16.33■□□□□ 0.2
IDH3A-219ENST00000560414 LEXMQ3ZCV2 418 aa16.33■□□□□ 0.2
IDH3A-219ENST00000560414 KCNT2Q6UVM3 1135 aa16.33■□□□□ 0.2
IDH3A-219ENST00000560414 ZNF687Q8N1G0 1237 aa16.33■□□□□ 0.2
IDH3A-219ENST00000560414 LRRC43Q8N309 656 aa16.33■□□□□ 0.2
IDH3A-219ENST00000560414 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.33■□□□□ 0.2
IDH3A-219ENST00000560414 BACH2Q9BYV9 841 aa16.33■□□□□ 0.2
IDH3A-219ENST00000560414 POLR3FQ9H1D9 316 aaPredicted RBP16.33■□□□□ 0.2
IDH3A-219ENST00000560414 LRWD1Q9UFC0 647 aa16.33■□□□□ 0.2
IDH3A-219ENST00000560414 DBR1Q9UK59 544 aaKnown RBP16.33■□□□□ 0.2
IDH3A-219ENST00000560414 PCDHB2Q9Y5E7 798 aa16.33■□□□□ 0.2
IDH3A-219ENST00000560414 INO80B-WBP1J3KQ70 363 aa16.32■□□□□ 0.2
IDH3A-219ENST00000560414 TNFRSF10AO00220 468 aa16.32■□□□□ 0.2
IDH3A-219ENST00000560414 LINC01565O15544 149 aa16.32■□□□□ 0.2
IDH3A-219ENST00000560414 ZNF623O75123 536 aa16.32■□□□□ 0.2
IDH3A-219ENST00000560414 CCT6AP40227 531 aaKnown RBP16.32■□□□□ 0.2
IDH3A-219ENST00000560414 ERVFC1P60507 584 aa16.32■□□□□ 0.2
IDH3A-219ENST00000560414 TFDP1Q14186 410 aa16.32■□□□□ 0.2
IDH3A-219ENST00000560414 COL19A1Q14993 1142 aa16.32■□□□□ 0.2
IDH3A-219ENST00000560414 IL17AQ16552 155 aa16.32■□□□□ 0.2
IDH3A-219ENST00000560414 UBXN11Q5T124 520 aa16.32■□□□□ 0.2
IDH3A-219ENST00000560414 MICAL1Q8TDZ2 1067 aa16.32■□□□□ 0.2
IDH3A-219ENST00000560414 PLXNA4Q9HCM2 1894 aa16.32■□□□□ 0.2
IDH3A-219ENST00000560414 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.32■□□□□ 0.2
IDH3A-219ENST00000560414 INPP5FQ9Y2H2 1132 aa16.32■□□□□ 0.2
IDH3A-219ENST00000560414 PP2D1A8MPX8 630 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 NT5C1B-RDH14C9J2C7 533 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 TSPAN1O60635 241 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 ERLIN2O94905 339 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 SKIP12755 728 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 LTBRP36941 435 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 RAB27AP51159 221 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 MBTD1Q05BQ5 628 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 DLX2Q07687 328 aaPredicted RBP16.31■□□□□ 0.2
IDH3A-219ENST00000560414 CTC1Q2NKJ3 1217 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 LARP1BQ659C4 914 aaKnown RBP16.31■□□□□ 0.2
IDH3A-219ENST00000560414 HAUS3Q68CZ6 603 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 AGMOQ6ZNB7 445 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 RBM23Q86U06 439 aaKnown RBP16.31■□□□□ 0.2
IDH3A-219ENST00000560414 TTC13Q8NBP0 860 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 CPB2Q96IY4 423 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 ZNF558Q96NG5 402 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 POLD4Q9HCU8 107 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.31■□□□□ 0.2
IDH3A-219ENST00000560414 NCOR1O75376 2440 aa16.31■□□□□ 0.2
IDH3A-219ENST00000560414 ARHGEF35A5YM69 484 aa16.3■□□□□ 0.2
IDH3A-219ENST00000560414 OFD1O75665 1012 aa16.3■□□□□ 0.2
IDH3A-219ENST00000560414 IL9P15248 144 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms