RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CCT8L1PA6NM43 557 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 E7ENQ6 273 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 J3QW42 95 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 DNM1LO00429 736 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 ZNF185O15231 689 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 EFSO43281 561 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 FLOT1O75955 427 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 RHOBTB3O94955 611 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 TRIM37O94972 964 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 KIF4AO95239 1232 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 KRT14P02533 472 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 RPN1P04843 607 aaKnown RBP6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 PECAM1P16284 738 aaPredicted RBP6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 FERP16591 822 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 TFE3P19532 575 aaPredicted RBP6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 CD33P20138 364 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 DRD4P21917 467 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 CCND1P24385 295 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 ADH6P28332 368 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 CDC25AP30304 524 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 SOX18P35713 384 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 AFMP43652 599 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 CRKP46108 304 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 HAND2P61296 217 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 TNP2Q05952 138 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 AIMP1Q12904 312 aaKnown RBP6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 BIRC2Q13490 618 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 SERINC3Q13530 473 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 BLMHQ13867 455 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 BYSLQ13895 437 aaKnown RBP6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 RAB33AQ14088 237 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 LBRQ14739 615 aaKnown RBP6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 EZH2Q15910 746 aaKnown RBP6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 PCNX4Q63HM2 1172 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 ZNF790Q6PG37 636 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 MICU3Q86XE3 530 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 CEP57Q86XR8 500 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 IRF2BP1Q8IU81 584 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 TBC1D10CQ8IV04 446 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 GBP7Q8N8V2 638 aaPredicted RBP6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 ANKS4BQ8N8V4 417 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 CCDC63Q8NA47 563 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 CCDC197Q8NCU1 140 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 CCDC26Q8TAB7 109 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 LMBR1Q8WVP7 490 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 SYN2Q92777 582 aaPredicted RBP6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 GDAP1L1Q96MZ0 367 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 SCLT1Q96NL6 688 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 NECAB3Q96P71 396 aaPredicted RBP6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 NOX5Q96PH1 765 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 FERD3LQ96RJ6 166 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 SLC30A3Q99726 388 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 PHF20Q9BVI0 1012 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 IFIH1Q9BYX4 1025 aaKnown RBP6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 LACRTQ9GZZ8 138 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 NDST4Q9H3R1 872 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 LRWD1Q9UFC0 647 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 TMEM59LQ9UK28 342 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 PLAAQ9Y263 795 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 LEMD3Q9Y2U8 911 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 PCDHA13Q9Y5I0 950 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 EID1Q9Y6B2 187 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 CAPN6Q9Y6Q1 641 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 AFF2P51816 1311 aa6.49□□□□□ -1.37
SNRPA1-209ENST00000560307 TRPM3Q9HCF6 1732 aaPredicted RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 H0YGN5 161 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 CCDC188H7C350 402 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 PDLIM1O00151 329 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 SMAD7O15105 426 aaKnown RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 PRPF3O43395 683 aaKnown RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 GREM1O60565 184 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 PAGE1O75459 146 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 FGFR1OPO95684 399 aaKnown RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 VIMP08670 466 aaKnown RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 SNRPA1P09661 255 aaKnown RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 CALM1P0DP23 149 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 CALM2P0DP24 149 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 CALM3P0DP25 149 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 GNAT2P19087 354 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 TRIM21P19474 475 aaKnown RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 GARTP22102 1010 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 CCNE1P24864 410 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 PRCPP42785 496 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 CARSP49589 748 aaKnown RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 NT5C2P49902 561 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 CCNHP51946 323 aaPredicted RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 KIF11P52732 1056 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 SEC24CP53992 1094 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 INHBEP58166 350 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 MAP3K12Q12852 859 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 UBAP2LQ14157 1087 aaKnown RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 WTAPQ15007 396 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 SKIDA1Q1XH10 827 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 CCDC96Q2M329 555 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 TTC38Q5R3I4 469 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 KLHDC7AQ5VTJ3 777 aa6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 TTC19Q6DKK2 380 aaPredicted RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 CAPRIN2Q6IMN6 1127 aaKnown RBP6.48□□□□□ -1.37
SNRPA1-209ENST00000560307 TTI2Q6NXR4 508 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms