RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 KCMF1Q9P0J7 381 aa6.62□□□□□ -1.35
CRNDE-208ENST00000560029 TMPRSS11EQ9UL52 423 aa6.62□□□□□ -1.35
CRNDE-208ENST00000560029 DENND2AQ9ULE3 1009 aa6.62□□□□□ -1.35
CRNDE-208ENST00000560029 USP18Q9UMW8 372 aa6.62□□□□□ -1.35
CRNDE-208ENST00000560029 OPHN1O60890 802 aa6.61□□□□□ -1.35
CRNDE-208ENST00000560029 S100BP04271 92 aaPredicted RBP6.61□□□□□ -1.35
CRNDE-208ENST00000560029 INHBCP55103 352 aa6.61□□□□□ -1.35
CRNDE-208ENST00000560029 SRSF2Q01130 221 aaKnown RBP6.61□□□□□ -1.35
CRNDE-208ENST00000560029 MAP3K12Q12852 859 aa6.61□□□□□ -1.35
CRNDE-208ENST00000560029 TOP3AQ13472 1001 aaPredicted RBP6.61□□□□□ -1.35
CRNDE-208ENST00000560029 TRIM25Q14258 630 aaKnown RBP6.61□□□□□ -1.35
CRNDE-208ENST00000560029 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.61□□□□□ -1.35
CRNDE-208ENST00000560029 TOR2AQ5JU69 321 aa6.61□□□□□ -1.35
CRNDE-208ENST00000560029 TMEM200BQ69YZ2 307 aa6.61□□□□□ -1.35
CRNDE-208ENST00000560029 DNAJC10Q8IXB1 793 aa6.61□□□□□ -1.35
CRNDE-208ENST00000560029 C1orf162Q8NEQ5 155 aaPredicted RBP6.61□□□□□ -1.35
CRNDE-208ENST00000560029 CACTINQ8WUQ7 758 aaKnown RBP6.61□□□□□ -1.35
CRNDE-208ENST00000560029 ORAI2Q96SN7 254 aa6.61□□□□□ -1.35
CRNDE-208ENST00000560029 PLA2G12BQ9BX93 195 aa6.61□□□□□ -1.35
CRNDE-208ENST00000560029 PITHD1Q9GZP4 211 aaPredicted RBP6.61□□□□□ -1.35
CRNDE-208ENST00000560029 KCTD10Q9H3F6 313 aa6.61□□□□□ -1.35
CRNDE-208ENST00000560029 DNAJC28Q9NX36 388 aa6.61□□□□□ -1.35
CRNDE-208ENST00000560029 NUMBLQ9Y6R0 609 aa6.61□□□□□ -1.35
CRNDE-208ENST00000560029 A0A0A6YYJ9 748 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 A0A0G2JNJ9 132 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 MATN2O00339 956 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 POLD1P28340 1107 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 STAT5BP51692 787 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 LGALS4P56470 323 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 PPARAQ07869 468 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 PCBP2Q15366 365 aaKnown RBP eCLIP6.6□□□□□ -1.35
CRNDE-208ENST00000560029 CLUL1Q15846 466 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 DGKDQ16760 1214 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 ODR4Q5SWX8 454 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 MAMDC4Q6UXC1 1216 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 POLNQ7Z5Q5 900 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 LYSMD2Q8IV50 215 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 AMOTL1Q8IY63 956 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 BCL6BQ8N143 479 aaPredicted RBP6.6□□□□□ -1.35
CRNDE-208ENST00000560029 LARP4BQ92615 738 aaKnown RBP6.6□□□□□ -1.35
CRNDE-208ENST00000560029 FUBP3Q96I24 572 aaKnown RBP eCLIP6.6□□□□□ -1.35
CRNDE-208ENST00000560029 FAXDC2Q96IV6 333 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 WNT8AQ9H1J5 351 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 MKS1Q9NXB0 559 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 Q9UFV3 132 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 FBXO10Q9UK96 956 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 G3BP2Q9UN86 482 aaKnown RBP6.6□□□□□ -1.35
CRNDE-208ENST00000560029 NR2E1Q9Y466 385 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 PCDHB6Q9Y5E3 794 aa6.6□□□□□ -1.35
CRNDE-208ENST00000560029 SHTN1A0MZ66 631 aa6.59□□□□□ -1.35
CRNDE-208ENST00000560029 FZD9O00144 591 aa6.59□□□□□ -1.35
CRNDE-208ENST00000560029 MAFGO15525 162 aa6.59□□□□□ -1.35
CRNDE-208ENST00000560029 MAFO75444 373 aaPredicted RBP6.59□□□□□ -1.35
CRNDE-208ENST00000560029 TTF1Q15361 905 aaPredicted RBP6.59□□□□□ -1.35
CRNDE-208ENST00000560029 TBR1Q16650 682 aa6.59□□□□□ -1.35
CRNDE-208ENST00000560029 BMP8AQ7Z5Y6 402 aa6.59□□□□□ -1.35
CRNDE-208ENST00000560029 LDLRAD3Q86YD5 345 aa6.59□□□□□ -1.35
CRNDE-208ENST00000560029 CDYL2Q8N8U2 506 aa6.59□□□□□ -1.35
CRNDE-208ENST00000560029 ZG16BQ96DA0 208 aa6.59□□□□□ -1.35
CRNDE-208ENST00000560029 DYDC2Q96IM9 177 aa6.59□□□□□ -1.35
CRNDE-208ENST00000560029 KLHL42Q9P2K6 505 aa6.59□□□□□ -1.35
CRNDE-208ENST00000560029 SAE1Q9UBE0 346 aaPredicted RBP6.59□□□□□ -1.35
CRNDE-208ENST00000560029 DPP7Q9UHL4 492 aa6.59□□□□□ -1.35
CRNDE-208ENST00000560029 PRSS50Q9UI38 385 aa6.59□□□□□ -1.35
CRNDE-208ENST00000560029 DNAI1Q9UI46 699 aa6.59□□□□□ -1.35
CRNDE-208ENST00000560029 CUTAO60888 179 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 CFBP00751 764 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 HMGCRP04035 888 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 RBP3P10745 1247 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 OSMP13725 252 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 NEK2P51955 445 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 CCT2P78371 535 aaKnown RBP6.58□□□□□ -1.36
CRNDE-208ENST00000560029 CDK17Q00537 523 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 FOXL1Q12952 345 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 TUBA3CQ13748 450 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 EIF4HQ15056 248 aaKnown RBP6.58□□□□□ -1.36
CRNDE-208ENST00000560029 TUBA3EQ6PEY2 450 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 ZNF627Q7L945 461 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 ZBTB46Q86UZ6 589 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 SLC41A1Q8IVJ1 513 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 RAVER1Q8IY67 606 aaKnown RBP6.58□□□□□ -1.36
CRNDE-208ENST00000560029 GAB3Q8WWW8 586 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 FAM89AQ96GI7 184 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 HIST1H2AHQ96KK5 128 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 HIST1H2AJQ99878 128 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 POLR3BQ9NW08 1133 aaPredicted RBP6.58□□□□□ -1.36
CRNDE-208ENST00000560029 SYNPO2Q9UMS6 1093 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 THRAP3Q9Y2W1 955 aaKnown RBP6.58□□□□□ -1.36
CRNDE-208ENST00000560029 SLC30A1Q9Y6M5 507 aa6.58□□□□□ -1.36
CRNDE-208ENST00000560029 A0A0A6YYK5 440 aaPredicted RBP6.57□□□□□ -1.36
CRNDE-208ENST00000560029 TRIM75PA6NK02 468 aa6.57□□□□□ -1.36
CRNDE-208ENST00000560029 XPOTO43592 962 aaKnown RBP6.57□□□□□ -1.36
CRNDE-208ENST00000560029 PCDHGA12O60330 932 aa6.57□□□□□ -1.36
CRNDE-208ENST00000560029 CCND1P24385 295 aa6.57□□□□□ -1.36
CRNDE-208ENST00000560029 ACRV1P26436 265 aa6.57□□□□□ -1.36
CRNDE-208ENST00000560029 HIBADHP31937 336 aaKnown RBP6.57□□□□□ -1.36
CRNDE-208ENST00000560029 MSX2P35548 267 aaPredicted RBP6.57□□□□□ -1.36
CRNDE-208ENST00000560029 ETV4P43268 484 aa6.57□□□□□ -1.36
CRNDE-208ENST00000560029 MRPS9P82933 396 aaKnown RBP6.57□□□□□ -1.36
CRNDE-208ENST00000560029 PURAQ00577 322 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms