RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 KIAA0391O15091 583 aaKnown RBP8.76□□□□□ -1.01
SMAD3-212ENST00000559937 RPS6KA5O75582 802 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 MTA2O94776 668 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 HEXIM1O94992 359 aaKnown RBP8.76□□□□□ -1.01
SMAD3-212ENST00000559937 SYF2O95926 243 aaKnown RBP8.76□□□□□ -1.01
SMAD3-212ENST00000559937 CCNE2O96020 404 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 EGFRP00533 1210 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 GZMAP12544 262 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 KCNA2P16389 499 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 GARTP22102 1010 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 MXI1P50539 228 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 PEX3P56589 373 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 DMP1Q13316 513 aaPredicted RBP8.76□□□□□ -1.01
SMAD3-212ENST00000559937 CUL1Q13616 776 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 BAATQ14032 418 aaPredicted RBP8.76□□□□□ -1.01
SMAD3-212ENST00000559937 GNPTABQ3T906 1256 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 SH3D19Q5HYK7 790 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 C1orf220Q5T0J3 134 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 PHLDB3Q6NSJ2 640 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 C11orf63Q6NUN7 778 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 SND1Q7KZF4 910 aaKnown RBP eCLIP8.76□□□□□ -1.01
SMAD3-212ENST00000559937 NT5DC3Q86UY8 548 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 C1orf131Q8NDD1 294 aaKnown RBP8.76□□□□□ -1.01
SMAD3-212ENST00000559937 TMEM161BQ8NDZ6 487 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 HES6Q96HZ4 224 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 FBXL18Q96ME1 805 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 PSMB7Q99436 277 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 NAP1L3Q99457 506 aaPredicted RBP8.76□□□□□ -1.01
SMAD3-212ENST00000559937 AGPAT1Q99943 283 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.76□□□□□ -1.015e-9■□□□□ 11.2
SMAD3-212ENST00000559937 TEX13BQ9BXU2 312 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 ISCUQ9H1K1 167 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 ACAD9Q9H845 621 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 TMEM8AQ9HCN3 771 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 PDLIM7Q9NR12 457 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 HOMER2Q9NSB8 354 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 EHD2Q9NZN4 543 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 CALCOCO1Q9P1Z2 691 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 VPS18Q9P253 973 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 ZNF214Q9UL59 606 aaPredicted RBP8.76□□□□□ -1.01
SMAD3-212ENST00000559937 TBX20Q9UMR3 447 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 BCS1LQ9Y276 419 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 FAN1Q9Y2M0 1017 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 IGSF9BQ9UPX0 1349 aa8.76□□□□□ -1.01
SMAD3-212ENST00000559937 TESPA1A2RU30 521 aaPredicted RBP8.75□□□□□ -1.01
SMAD3-212ENST00000559937 GOLGA6BA6NDN3 693 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 A6NNZ2 444 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 FOXN3O00409 490 aaPredicted RBP8.75□□□□□ -1.01
SMAD3-212ENST00000559937 KCNK3O14649 394 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 SLC16A4O15374 487 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 CEP104O60308 925 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 ATP9AO75110 1047 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 RNF40O75150 1001 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 ZC3H11AO75152 810 aaKnown RBP eCLIP8.75□□□□□ -1.01
SMAD3-212ENST00000559937 RTN2O75298 545 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 DGAT1O75907 488 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 STBD1O95210 358 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 HSPA6P17066 643 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 ICAM3P32942 547 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 MATR3P43243 847 aaKnown RBP eCLIP8.75□□□□□ -1.011e-6■■■□□ 17.3
SMAD3-212ENST00000559937 GPC3P51654 580 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 MFAP3P55082 362 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 PPP3CAQ08209 521 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 PPFIA1Q13136 1202 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 TUBB8Q3ZCM7 444 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 TBC1D10BQ4KMP7 808 aaPredicted RBP8.75□□□□□ -1.01
SMAD3-212ENST00000559937 FAM102BQ5T8I3 360 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 KRT39Q6A163 491 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 SNRNP48Q6IEG0 339 aaKnown RBP8.75□□□□□ -1.01
SMAD3-212ENST00000559937 CATSPERGQ6ZRH7 1159 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 ANO5Q75V66 913 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 SAMD7Q7Z3H4 446 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 DAAM2Q86T65 1068 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 GLYCTKQ8IVS8 523 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 FAM71AQ8IYT1 594 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 METTL13Q8N6R0 699 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 CHST13Q8NET6 341 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 DNERQ8NFT8 737 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 AFAP1L1Q8TED9 768 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 HDAC7Q8WUI4 952 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 SHC3Q92529 594 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 MS4A14Q96JA4 679 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 MFSD14AQ96MC6 490 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 WRNIP1Q96S55 665 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 SH3GL2Q99962 352 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 CBWD1Q9BRT8 395 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 CARD9Q9H257 536 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 PCIF1Q9H4Z3 704 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 KIAA1586Q9HCI6 787 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 KMT5AQ9NQR1 393 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 HOXC10Q9NYD6 342 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 SMARCAL1Q9NZC9 954 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 TMOD4Q9NZQ9 345 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 SLC9A2Q9UBY0 812 aa8.75□□□□□ -1.01
SMAD3-212ENST00000559937 TMCO5BA8MYB1 307 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 SPATA31C2B4DYI2 1134 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 AGPSO00116 658 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 ZNF862O60290 1169 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 HSF2BPO75031 334 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 ZMYND10O75800 440 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms