RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 LARSQ9P2J5 1176 aaKnown RBP22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 SERTAD1Q9UHV2 236 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 KCNG1Q9UIX4 513 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 INSL6Q9Y581 213 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 PCDHB7Q9Y5E2 793 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 SZT2Q5T011 3432 aa22.37■■□□□ 1.17
TSPAN3-207ENST00000559494 LCHNA4D1U4 455 aa22.36■■□□□ 1.17
TSPAN3-207ENST00000559494 K7ERI5 159 aa22.36■■□□□ 1.17
TSPAN3-207ENST00000559494 ACKR2O00590 384 aa22.36■■□□□ 1.17
TSPAN3-207ENST00000559494 PRKCBP05771 671 aa22.36■■□□□ 1.17
TSPAN3-207ENST00000559494 STAG3L1P0CL83 205 aa22.36■■□□□ 1.17
TSPAN3-207ENST00000559494 LIG1P18858 919 aa22.36■■□□□ 1.17
TSPAN3-207ENST00000559494 TMEM161BQ8NDZ6 487 aa22.36■■□□□ 1.17
TSPAN3-207ENST00000559494 PRIMPOLQ96LW4 560 aa22.36■■□□□ 1.17
TSPAN3-207ENST00000559494 FIZ1Q96SL8 496 aa22.36■■□□□ 1.17
TSPAN3-207ENST00000559494 TNMDQ9H2S6 317 aa22.36■■□□□ 1.17
TSPAN3-207ENST00000559494 ZHX3Q9H4I2 956 aa22.36■■□□□ 1.17
TSPAN3-207ENST00000559494 ELAC1Q9H777 363 aaKnown RBP22.36■■□□□ 1.17
TSPAN3-207ENST00000559494 CHD9Q3L8U1 2897 aa22.36■■□□□ 1.17
TSPAN3-207ENST00000559494 A0A1B0GUA9 196 aa22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 ACTN4O43707 911 aaKnown RBP22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 TBCAO75347 108 aaKnown RBP22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 DGKIO75912 1065 aa22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 ARHGEF15O94989 841 aa22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 ATF7P17544 494 aaPredicted RBP22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 SMTNP53814 917 aa22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 NCBP1Q09161 790 aaKnown RBP22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 LONRF3Q496Y0 759 aa22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 NT5DC1Q5TFE4 455 aa22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 ZNF598Q86UK7 904 aaKnown RBP22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 MRPS27Q92552 414 aaKnown RBP22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 ZNF689Q96CS4 500 aaPredicted RBP22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 PYM1Q9BRP8 204 aaKnown RBP22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 FAM105AQ9NUU6 356 aa22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 TMEM161AQ9NX61 479 aa22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 LRFN2Q9ULH4 789 aa22.35■■□□□ 1.17
TSPAN3-207ENST00000559494 ZNF623O75123 536 aa22.34■■□□□ 1.17
TSPAN3-207ENST00000559494 CA3P07451 260 aa22.34■■□□□ 1.17
TSPAN3-207ENST00000559494 SLFN14P0C7P3 912 aa22.34■■□□□ 1.17
TSPAN3-207ENST00000559494 SYKP43405 635 aa22.34■■□□□ 1.17
TSPAN3-207ENST00000559494 GATMP50440 423 aa22.34■■□□□ 1.17
TSPAN3-207ENST00000559494 NCKAP1LP55160 1127 aa22.34■■□□□ 1.17
TSPAN3-207ENST00000559494 PRPF4BQ13523 1007 aaKnown RBP22.34■■□□□ 1.17
TSPAN3-207ENST00000559494 GPR153Q6NV75 609 aa22.34■■□□□ 1.17
TSPAN3-207ENST00000559494 NOTUMQ6P988 496 aa22.34■■□□□ 1.17
TSPAN3-207ENST00000559494 CDR2LQ86X02 465 aaPredicted RBP22.34■■□□□ 1.17
TSPAN3-207ENST00000559494 YME1L1Q96TA2 773 aa22.34■■□□□ 1.17
TSPAN3-207ENST00000559494 LRRC27Q9C0I9 530 aa22.34■■□□□ 1.17
TSPAN3-207ENST00000559494 RC3H2Q9HBD1 1191 aaKnown RBP22.34■■□□□ 1.17
TSPAN3-207ENST00000559494 RNF19AQ9NV58 838 aa22.34■■□□□ 1.17
TSPAN3-207ENST00000559494 TRAK2O60296 914 aa22.33■■□□□ 1.17
TSPAN3-207ENST00000559494 EOMESO95936 686 aa22.33■■□□□ 1.17
TSPAN3-207ENST00000559494 MAPTP10636 758 aaKnown RBP22.33■■□□□ 1.17
TSPAN3-207ENST00000559494 AMPD3Q01432 767 aa22.33■■□□□ 1.17
TSPAN3-207ENST00000559494 HAUS6Q7Z4H7 955 aa22.33■■□□□ 1.17
TSPAN3-207ENST00000559494 SP7Q8TDD2 431 aaPredicted RBP22.33■■□□□ 1.17
TSPAN3-207ENST00000559494 CCDC51Q96ER9 411 aa22.33■■□□□ 1.17
TSPAN3-207ENST00000559494 C7orf25Q9BPX7 421 aa22.33■■□□□ 1.17
TSPAN3-207ENST00000559494 EIF2AQ9BY44 585 aaKnown RBP22.33■■□□□ 1.17
TSPAN3-207ENST00000559494 TRIM9Q9C026 710 aa22.33■■□□□ 1.17
TSPAN3-207ENST00000559494 MAGEF1Q9HAY2 307 aa22.33■■□□□ 1.17
TSPAN3-207ENST00000559494 RNF216Q9NWF9 866 aaPredicted RBP22.33■■□□□ 1.17
TSPAN3-207ENST00000559494 PCDHB2Q9Y5E7 798 aa22.33■■□□□ 1.17
TSPAN3-207ENST00000559494 PHLPP2Q6ZVD8 1323 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 CNTNAP2Q9UHC6 1331 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 FRMD3A2A2Y4 597 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 GOLGA6L4A6NEF3 574 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 IDEP14735 1019 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 CASP1P29466 404 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 NMT1P30419 496 aaKnown RBP22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 AFMP43652 599 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 CNNM4Q6P4Q7 775 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 MRPL10Q7Z7H8 261 aaKnown RBP22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 SFR1Q86XK3 245 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 GRAMD1CQ8IYS0 662 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 CEP57L1Q8IYX8 460 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 RNF169Q8NCN4 708 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 KCNN1Q92952 543 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 PAGE5Q96GU1 130 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 TTYH1Q9H313 450 aaPredicted RBP22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 SLC28A3Q9HAS3 691 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 PANK4Q9NVE7 773 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 USP25Q9UHP3 1055 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 CHD7Q9P2D1 2997 aa22.32■■□□□ 1.16
TSPAN3-207ENST00000559494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 FGFR1P11362 822 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 SKIP12755 728 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 GAP43P17677 238 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 RAB27AP51159 221 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 TAP1Q03518 808 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 EEF1DP3Q658K8 133 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 FAM178BQ8IXR5 827 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 SMG8Q8ND04 991 aaKnown RBP22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 LPPQ93052 612 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 BLZF1Q9H2G9 400 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 SEMA6BQ9H3T3 888 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 PDZD7Q9H5P4 517 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 ZNF576Q9H609 170 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 COL4A6Q14031 1691 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 LINC01553A4QN01 128 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms