RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 KCTD17Q8N5Z5 321 aa20.66■□□□□ 0.9
CASC4-209ENST00000559222 IFT74Q96LB3 600 aa20.66■□□□□ 0.9
CASC4-209ENST00000559222 DRC1Q96MC2 740 aa20.66■□□□□ 0.9
CASC4-209ENST00000559222 CASD1Q96PB1 797 aa20.66■□□□□ 0.9
CASC4-209ENST00000559222 TGS1Q96RS0 853 aaKnown RBP20.66■□□□□ 0.9
CASC4-209ENST00000559222 ELAC1Q9H777 363 aaKnown RBP20.66■□□□□ 0.9
CASC4-209ENST00000559222 DACT1Q9NYF0 836 aa20.66■□□□□ 0.9
CASC4-209ENST00000559222 CCDC39Q9UFE4 941 aa20.66■□□□□ 0.9
CASC4-209ENST00000559222 CNTNAP2Q9UHC6 1331 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 MYMKA6NI61 221 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 SLC16A4O15374 487 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 TXLNAP40222 546 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 PPP2R5AQ15172 486 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 E2F4Q16254 413 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 EEF1DP3Q658K8 133 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 PPP4R3CPQ6ZMV5 832 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 LRRC55Q6ZSA7 311 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 CMTR2Q8IYT2 770 aaKnown RBP20.65■□□□□ 0.9
CASC4-209ENST00000559222 FIBCD1Q8N539 461 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 SMG8Q8ND04 991 aaKnown RBP20.65■□□□□ 0.9
CASC4-209ENST00000559222 HELQQ8TDG4 1101 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 STAMQ92783 540 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 TRAIPQ9BWF2 469 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 STK17AQ9UEE5 414 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 CFAP45Q9UL16 551 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 HES2Q9Y543 173 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 PCDHB2Q9Y5E7 798 aa20.65■□□□□ 0.9
CASC4-209ENST00000559222 LPXNO60711 386 aa20.64■□□□□ 0.89
CASC4-209ENST00000559222 STAT6P42226 847 aa20.64■□□□□ 0.89
CASC4-209ENST00000559222 AFF1P51825 1210 aaKnown RBP20.64■□□□□ 0.89
CASC4-209ENST00000559222 KRT85P78386 507 aa20.64■□□□□ 0.89
CASC4-209ENST00000559222 DMP1Q13316 513 aaPredicted RBP20.64■□□□□ 0.89
CASC4-209ENST00000559222 FAM187BQ17R55 369 aa20.64■□□□□ 0.89
CASC4-209ENST00000559222 TPRNQ4KMQ1 711 aa20.64■□□□□ 0.89
CASC4-209ENST00000559222 NT5DC1Q5TFE4 455 aa20.64■□□□□ 0.89
CASC4-209ENST00000559222 DYMQ7RTS9 669 aa20.64■□□□□ 0.89
CASC4-209ENST00000559222 SPATA32Q96LK8 384 aa20.64■□□□□ 0.89
CASC4-209ENST00000559222 C2orf40Q9H1Z8 148 aa20.64■□□□□ 0.89
CASC4-209ENST00000559222 RNF39Q9H2S5 420 aa20.64■□□□□ 0.89
CASC4-209ENST00000559222 PDZD7Q9H5P4 517 aa20.64■□□□□ 0.89
CASC4-209ENST00000559222 PRMT7Q9NVM4 692 aaPredicted RBP20.64■□□□□ 0.89
CASC4-209ENST00000559222 ARHGAP28Q9P2N2 729 aa20.64■□□□□ 0.89
CASC4-209ENST00000559222 DLL1O00548 723 aa20.63■□□□□ 0.89
CASC4-209ENST00000559222 NPTXRO95502 500 aa20.63■□□□□ 0.89
CASC4-209ENST00000559222 PLS3P13797 630 aa20.63■□□□□ 0.89
CASC4-209ENST00000559222 EPC2Q52LR7 807 aa20.63■□□□□ 0.89
CASC4-209ENST00000559222 RESP18Q5W5W9 173 aa20.63■□□□□ 0.89
CASC4-209ENST00000559222 NOTUMQ6P988 496 aa20.63■□□□□ 0.89
CASC4-209ENST00000559222 AGMOQ6ZNB7 445 aa20.63■□□□□ 0.89
CASC4-209ENST00000559222 TMEM192Q8IY95 271 aa20.63■□□□□ 0.89
CASC4-209ENST00000559222 DHX58Q96C10 678 aa20.63■□□□□ 0.89
CASC4-209ENST00000559222 TIPINQ9BVW5 301 aa20.63■□□□□ 0.89
CASC4-209ENST00000559222 NXF3Q9H4D5 531 aaKnown RBP20.63■□□□□ 0.89
CASC4-209ENST00000559222 KMT5AQ9NQR1 393 aa20.63■□□□□ 0.89
CASC4-209ENST00000559222 KCND2Q9NZV8 630 aa20.63■□□□□ 0.89
CASC4-209ENST00000559222 IPPQ9Y573 584 aa20.63■□□□□ 0.89
CASC4-209ENST00000559222 PHLPP2Q6ZVD8 1323 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 B4GALT3O60512 393 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 FOSL2P15408 326 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 AXLP30530 894 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 CTNNB1P35222 781 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 ZNF131P52739 623 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 PRPF4BQ13523 1007 aaKnown RBP20.62■□□□□ 0.89
CASC4-209ENST00000559222 MAPK6Q16659 721 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 CCDC73Q6ZRK6 1079 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 TMEM161BQ8NDZ6 487 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 CLP1Q92989 425 aaKnown RBP20.62■□□□□ 0.89
CASC4-209ENST00000559222 DNAJC19Q96DA6 116 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 FIZ1Q96SL8 496 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 TMEM117Q9H0C3 514 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 ZHX3Q9H4I2 956 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 CWH43Q9H720 699 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 ODF2LQ9ULJ1 636 aa20.62■□□□□ 0.89
CASC4-209ENST00000559222 TRANK1O15050 2925 aa20.61■□□□□ 0.89
CASC4-209ENST00000559222 TDRD15B5MCY1 1934 aaKnown RBP20.61■□□□□ 0.89
CASC4-209ENST00000559222 A0A1B0GUA9 196 aa20.61■□□□□ 0.89
CASC4-209ENST00000559222 ACKR2O00590 384 aa20.61■□□□□ 0.89
CASC4-209ENST00000559222 ZNF623O75123 536 aa20.61■□□□□ 0.89
CASC4-209ENST00000559222 FAM13AO94988 1023 aa20.61■□□□□ 0.89
CASC4-209ENST00000559222 EOMESO95936 686 aa20.61■□□□□ 0.89
CASC4-209ENST00000559222 KRT18P05783 430 aaKnown RBP20.61■□□□□ 0.89
CASC4-209ENST00000559222 PBX3P40426 434 aa20.61■□□□□ 0.89
CASC4-209ENST00000559222 RAB27AP51159 221 aa20.61■□□□□ 0.89
CASC4-209ENST00000559222 FAM43BQ6ZT52 329 aaPredicted RBP20.61■□□□□ 0.89
CASC4-209ENST00000559222 MRPL10Q7Z7H8 261 aaKnown RBP20.61■□□□□ 0.89
CASC4-209ENST00000559222 FBXO22Q8NEZ5 403 aa20.61■□□□□ 0.89
CASC4-209ENST00000559222 SPIRE2Q8WWL2 714 aa20.61■□□□□ 0.89
CASC4-209ENST00000559222 DDX12PQ92771 950 aa20.61■□□□□ 0.89
CASC4-209ENST00000559222 APOL6Q9BWW8 343 aa20.61■□□□□ 0.89
CASC4-209ENST00000559222 CXCL16Q9H2A7 254 aa20.61■□□□□ 0.89
CASC4-209ENST00000559222 TYW1Q9NV66 732 aaKnown RBP20.61■□□□□ 0.89
CASC4-209ENST00000559222 INPP5FQ9Y2H2 1132 aa20.61■□□□□ 0.89
CASC4-209ENST00000559222 TRIP11Q15643 1979 aa20.6■□□□□ 0.89
CASC4-209ENST00000559222 MAPTP10636 758 aaKnown RBP20.6■□□□□ 0.89
CASC4-209ENST00000559222 CASP1P29466 404 aa20.6■□□□□ 0.89
CASC4-209ENST00000559222 NCKAP1LP55160 1127 aa20.6■□□□□ 0.89
CASC4-209ENST00000559222 NUCB2P80303 420 aa20.6■□□□□ 0.89
CASC4-209ENST00000559222 PCBP1Q15365 356 aaKnown RBP eCLIP20.6■□□□□ 0.89
CASC4-209ENST00000559222 SLC27A1Q6PCB7 646 aa20.6■□□□□ 0.89
CASC4-209ENST00000559222 SV2BQ7L1I2 683 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms