RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 MFAP3P55082 362 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 TNNC1P63316 161 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 PRKCEQ02156 737 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 VGLL4Q14135 290 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 ARHGAP44Q17R89 818 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 TRMT1LQ7Z2T5 733 aaKnown RBP12.22□□□□□ -0.45
CLPX-204ENST00000559152 PEX26Q7Z412 305 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 RIOX2Q8IUF8 465 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 GLYCTKQ8IVS8 523 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 SULF1Q8IWU6 871 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 LNX1Q8TBB1 728 aaPredicted RBP12.22□□□□□ -0.45
CLPX-204ENST00000559152 RFFLQ8WZ73 363 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 FBXL18Q96ME1 805 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 MPHOSPH6Q99547 160 aaKnown RBP12.22□□□□□ -0.45
CLPX-204ENST00000559152 AGPAT1Q99943 283 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 LRRC1Q9BTT6 524 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 STIM2Q9P246 746 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 SUCLA2Q9P2R7 463 aaPredicted RBP12.22□□□□□ -0.45
CLPX-204ENST00000559152 FZD1Q9UP38 647 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 SNCAIPQ9Y6H5 919 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 RLFQ13129 1914 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 NCANO14594 1321 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 ANKRD62A6NC57 917 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 ATG7O95352 703 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 MATR3P43243 847 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLPX-204ENST00000559152 IREB2P48200 963 aaKnown RBP12.22□□□□□ -0.45
CLPX-204ENST00000559152 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.22□□□□□ -0.45
CLPX-204ENST00000559152 IFT20Q8IY31 132 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 ACTRT1Q8TDG2 376 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 TMEM117Q9H0C3 514 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 TMEM8AQ9HCN3 771 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 DIS3Q9Y2L1 958 aaKnown RBP12.22□□□□□ -0.45
CLPX-204ENST00000559152 COQ4Q9Y3A0 265 aa12.22□□□□□ -0.45
CLPX-204ENST00000559152 TISP43B9A030 160 aa12.21□□□□□ -0.45
CLPX-204ENST00000559152 FOXN3O00409 490 aaPredicted RBP12.21□□□□□ -0.45
CLPX-204ENST00000559152 KCNK3O14649 394 aa12.21□□□□□ -0.45
CLPX-204ENST00000559152 ADSSP30520 456 aa12.21□□□□□ -0.45
CLPX-204ENST00000559152 TNNT3P45378 269 aaPredicted RBP12.21□□□□□ -0.45
CLPX-204ENST00000559152 CLUL1Q15846 466 aa12.21□□□□□ -0.45
CLPX-204ENST00000559152 C1orf220Q5T0J3 134 aa12.21□□□□□ -0.45
CLPX-204ENST00000559152 CCDC60Q8IWA6 550 aaPredicted RBP12.21□□□□□ -0.45
CLPX-204ENST00000559152 RHOT2Q8IXI1 618 aa12.21□□□□□ -0.45
CLPX-204ENST00000559152 GPD1LQ8N335 351 aa12.21□□□□□ -0.45
CLPX-204ENST00000559152 PROCA1Q8NCQ7 364 aaPredicted RBP12.21□□□□□ -0.45
CLPX-204ENST00000559152 PARD3BQ8TEW8 1205 aa12.21□□□□□ -0.45
CLPX-204ENST00000559152 POMGNT1Q8WZA1 660 aa12.21□□□□□ -0.45
CLPX-204ENST00000559152 MFSD14AQ96MC6 490 aa12.21□□□□□ -0.45
CLPX-204ENST00000559152 SYT17Q9BSW7 474 aa12.21□□□□□ -0.45
CLPX-204ENST00000559152 ZNF302Q9NR11 478 aa12.21□□□□□ -0.45
CLPX-204ENST00000559152 MAFBQ9Y5Q3 323 aaPredicted RBP12.21□□□□□ -0.45
CLPX-204ENST00000559152 ANKRD63C9JTQ0 380 aa12.21□□□□□ -0.46
CLPX-204ENST00000559152 HNRNPDLO14979 420 aaKnown RBP12.21□□□□□ -0.46
CLPX-204ENST00000559152 COPB2P35606 906 aa12.21□□□□□ -0.46
CLPX-204ENST00000559152 GPC3P51654 580 aa12.21□□□□□ -0.46
CLPX-204ENST00000559152 POLGP54098 1239 aaPredicted RBP12.21□□□□□ -0.46
CLPX-204ENST00000559152 PPATQ06203 517 aa12.21□□□□□ -0.46
CLPX-204ENST00000559152 STRN3Q13033 797 aa12.21□□□□□ -0.46
CLPX-204ENST00000559152 TCEAL1Q15170 157 aa12.21□□□□□ -0.46
CLPX-204ENST00000559152 EMBQ6PCB8 327 aa12.21□□□□□ -0.46
CLPX-204ENST00000559152 ENOSF1Q7L5Y1 443 aa12.21□□□□□ -0.46
CLPX-204ENST00000559152 DAAM2Q86T65 1068 aa12.21□□□□□ -0.46
CLPX-204ENST00000559152 FAM71BQ8TC56 605 aa12.21□□□□□ -0.46
CLPX-204ENST00000559152 MS4A14Q96JA4 679 aa12.21□□□□□ -0.46
CLPX-204ENST00000559152 PDE11AQ9HCR9 933 aa12.21□□□□□ -0.46
CLPX-204ENST00000559152 RBM12Q9NTZ6 932 aaKnown RBP12.21□□□□□ -0.46
CLPX-204ENST00000559152 AMFRQ9UKV5 643 aa12.21□□□□□ -0.46
CLPX-204ENST00000559152 PPME1Q9Y570 386 aa12.21□□□□□ -0.46
CLPX-204ENST00000559152 POLR3GO15318 223 aaPredicted RBP12.2□□□□□ -0.46
CLPX-204ENST00000559152 ZC3H11AO75152 810 aaKnown RBP eCLIP12.2□□□□□ -0.46
CLPX-204ENST00000559152 CLSTN1O94985 981 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 OATP04181 439 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 TGFB3P10600 412 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 AARSP49588 968 aaKnown RBP eCLIP12.2□□□□□ -0.46
CLPX-204ENST00000559152 ALDH5A1P51649 535 aaPredicted RBP12.2□□□□□ -0.46
CLPX-204ENST00000559152 EPHB4P54760 987 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 HADHBP55084 474 aaKnown RBP12.2□□□□□ -0.46
CLPX-204ENST00000559152 PRKG1Q13976 671 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 NEDD9Q14511 834 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 ZNF771Q7L3S4 317 aaPredicted RBP12.2□□□□□ -0.46
CLPX-204ENST00000559152 CBWD2Q8IUF1 395 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 USP38Q8NB14 1042 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 FBXL13Q8NEE6 735 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 SLC35G2Q8TBE7 412 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.2□□□□□ -0.46
CLPX-204ENST00000559152 BICD1Q96G01 975 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 POLR3FQ9H1D9 316 aaPredicted RBP12.2□□□□□ -0.46
CLPX-204ENST00000559152 SUGCTQ9HAC7 445 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 ST7Q9NRC1 585 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 NRBP2Q9NSY0 501 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 SEPT11Q9NVA2 429 aaKnown RBP12.2□□□□□ -0.46
CLPX-204ENST00000559152 ARHGAP28Q9P2N2 729 aa12.2□□□□□ -0.46
CLPX-204ENST00000559152 COL11A1P12107 1806 aaPredicted RBP12.2□□□□□ -0.46
CLPX-204ENST00000559152 GOLGA8IPA6NC78 632 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 ZNF233A6NK53 670 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 GOLGA8JA6NMD2 632 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 TMCO5BA8MYB1 307 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 CCDC188H7C350 402 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 CXCL11O14625 94 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 LRRN2O75325 713 aa12.19□□□□□ -0.46
CLPX-204ENST00000559152 ADRB2P07550 413 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 307.6 ms