RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ANAPC4Q9UJX5 808 aa8.59□□□□□ -1.03
SPG11-213ENST00000558988 ASB14A6NK59 587 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 B4E1Z4 1266 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 ZNF213O14771 459 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 DHX16O60231 1041 aaKnown RBP8.58□□□□□ -1.04
SPG11-213ENST00000558988 DUSP11O75319 330 aaKnown RBP8.58□□□□□ -1.04
SPG11-213ENST00000558988 ASGR1P07306 291 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 CALML3P27482 149 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 DLG4P78352 724 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 TNFAIP2Q03169 654 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 BAATQ14032 418 aaPredicted RBP8.58□□□□□ -1.04
SPG11-213ENST00000558988 SNX17Q15036 470 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 USH1GQ495M9 461 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 MAMDC4Q6UXC1 1216 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 FAM133AQ8N9E0 248 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 STK32AQ8WU08 396 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 ESR2Q92731 530 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 RNPC3Q96LT9 517 aaKnown RBP8.58□□□□□ -1.04
SPG11-213ENST00000558988 HSPA12BQ96MM6 686 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 AP5M1Q9H0R1 490 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 PDGFCQ9NRA1 345 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 CYP39A1Q9NYL5 469 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 POLIQ9UNA4 740 aa8.58□□□□□ -1.04
SPG11-213ENST00000558988 OTOL1A6NHN0 477 aaPredicted RBP8.57□□□□□ -1.04
SPG11-213ENST00000558988 ICAM1P05362 532 aa8.57□□□□□ -1.04
SPG11-213ENST00000558988 PDHBP11177 359 aa8.57□□□□□ -1.04
SPG11-213ENST00000558988 ITGB8P26012 769 aa8.57□□□□□ -1.04
SPG11-213ENST00000558988 CHMP4BP1P59074 171 aa8.57□□□□□ -1.04
SPG11-213ENST00000558988 FPGSQ05932 587 aa8.57□□□□□ -1.04
SPG11-213ENST00000558988 AAMPQ13685 434 aa8.57□□□□□ -1.04
SPG11-213ENST00000558988 TKFCQ3LXA3 575 aa8.57□□□□□ -1.04
SPG11-213ENST00000558988 CXCL17Q6UXB2 119 aa8.57□□□□□ -1.04
SPG11-213ENST00000558988 SLC30A10Q6XR72 485 aa8.57□□□□□ -1.04
SPG11-213ENST00000558988 TLK2Q86UE8 772 aa8.57□□□□□ -1.04
SPG11-213ENST00000558988 PCSK9Q8NBP7 692 aaKnown RBP8.57□□□□□ -1.04
SPG11-213ENST00000558988 UBA5Q9GZZ9 404 aa8.57□□□□□ -1.04
SPG11-213ENST00000558988 RNF41Q9H4P4 317 aaPredicted RBP8.57□□□□□ -1.04
SPG11-213ENST00000558988 ASTN1O14525 1302 aa8.56□□□□□ -1.04
SPG11-213ENST00000558988 A0A0U1RQG5 324 aaPredicted RBP8.56□□□□□ -1.04
SPG11-213ENST00000558988 RAC2P15153 192 aa8.56□□□□□ -1.04
SPG11-213ENST00000558988 EPHB4P54760 987 aa8.56□□□□□ -1.04
SPG11-213ENST00000558988 PSMC6P62333 389 aa8.56□□□□□ -1.04
SPG11-213ENST00000558988 ZNF543Q08ER8 600 aa8.56□□□□□ -1.04
SPG11-213ENST00000558988 FAAP100Q0VG06 881 aa8.56□□□□□ -1.04
SPG11-213ENST00000558988 TMEM63BQ5T3F8 832 aa8.56□□□□□ -1.04
SPG11-213ENST00000558988 IQCA1Q86XH1 822 aa8.56□□□□□ -1.04
SPG11-213ENST00000558988 KLHDC9Q8NEP7 349 aa8.56□□□□□ -1.04
SPG11-213ENST00000558988 PPP1R13LQ8WUF5 828 aa8.56□□□□□ -1.04
SPG11-213ENST00000558988 CCDC120Q96HB5 630 aa8.56□□□□□ -1.04
SPG11-213ENST00000558988 RANBP17Q9H2T7 1088 aaKnown RBP8.56□□□□□ -1.04
SPG11-213ENST00000558988 KAT14Q9H8E8 782 aa8.56□□□□□ -1.04
SPG11-213ENST00000558988 VAT1LQ9HCJ6 419 aa8.56□□□□□ -1.04
SPG11-213ENST00000558988 MTMR10Q9NXD2 777 aa8.56□□□□□ -1.04
SPG11-213ENST00000558988 CNOT6Q9ULM6 557 aaKnown RBP8.56□□□□□ -1.04
SPG11-213ENST00000558988 ZMYM6O95789 1325 aa8.55□□□□□ -1.04
SPG11-213ENST00000558988 HIP1O00291 1037 aa8.55□□□□□ -1.04
SPG11-213ENST00000558988 TLR3O15455 904 aaKnown RBP8.55□□□□□ -1.04
SPG11-213ENST00000558988 PLA2G6O60733 806 aa8.55□□□□□ -1.04
SPG11-213ENST00000558988 FGRP09769 529 aa8.55□□□□□ -1.04
SPG11-213ENST00000558988 ACRP10323 421 aa8.55□□□□□ -1.04
SPG11-213ENST00000558988 CYP2C18P33260 490 aa8.55□□□□□ -1.04
SPG11-213ENST00000558988 ALDH5A1P51649 535 aaPredicted RBP8.55□□□□□ -1.04
SPG11-213ENST00000558988 GJA9P57773 515 aa8.55□□□□□ -1.04
SPG11-213ENST00000558988 ERVFC1P60507 584 aa8.55□□□□□ -1.04
SPG11-213ENST00000558988 CDC37Q16543 378 aaPredicted RBP8.55□□□□□ -1.04
SPG11-213ENST00000558988 FSCN1Q16658 493 aaKnown RBP8.55□□□□□ -1.04
SPG11-213ENST00000558988 IMMTQ16891 758 aaKnown RBP8.55□□□□□ -1.04
SPG11-213ENST00000558988 CCSAPQ6IQ19 270 aaPredicted RBP8.55□□□□□ -1.04
SPG11-213ENST00000558988 RNF207Q6ZRF8 634 aa8.55□□□□□ -1.04
SPG11-213ENST00000558988 ALPK1Q96QP1 1244 aa8.55□□□□□ -1.04
SPG11-213ENST00000558988 UBAC1Q9BSL1 405 aa8.55□□□□□ -1.04
SPG11-213ENST00000558988 KATNBL1Q9H079 304 aa8.55□□□□□ -1.04
SPG11-213ENST00000558988 UPF3AQ9H1J1 476 aaKnown RBP8.55□□□□□ -1.04
SPG11-213ENST00000558988 IL25Q9H293 177 aa8.55□□□□□ -1.04
SPG11-213ENST00000558988 TCP11L1Q9NUJ3 509 aa8.55□□□□□ -1.04
SPG11-213ENST00000558988 TNKSO95271 1327 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 LRRC37A2A6NM11 1700 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 LCTP09848 1927 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 ARVCFO00192 962 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 KIAA0355O15063 1070 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 CTAGE5O15320 804 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 ZEB2O60315 1214 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 MYL3P08590 195 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 PCP11498 1178 aaKnown RBP8.54□□□□□ -1.04
SPG11-213ENST00000558988 INSRRP14616 1297 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 CSF2RAP15509 400 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 CST5P28325 142 aaPredicted RBP8.54□□□□□ -1.04
SPG11-213ENST00000558988 EIF1AXP47813 144 aaKnown RBP8.54□□□□□ -1.04
SPG11-213ENST00000558988 FAM47CQ5HY64 1035 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 BTNL9Q6UXG8 535 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 ANKRD33Q7Z3H0 272 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 OR6J1Q8NGC5 347 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 GUCD1Q96NT3 240 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 WDR11Q9BZH6 1224 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 VTA1Q9NP79 307 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 ADD3Q9UEY8 706 aaKnown RBP8.54□□□□□ -1.04
SPG11-213ENST00000558988 CTNNA3Q9UI47 895 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 GNEQ9Y223 722 aaKnown RBP8.54□□□□□ -1.04
SPG11-213ENST00000558988 LAMA4Q16363 1823 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 ELP1O95163 1332 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms