RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 SHC4Q6S5L8 630 aa14.01□□□□□ -0.17
RABGGTA-207ENST00000558936 PPP4R3CPQ6ZMV5 832 aa14.01□□□□□ -0.17
RABGGTA-207ENST00000558936 ZNF280BQ86YH2 543 aa14.01□□□□□ -0.17
RABGGTA-207ENST00000558936 TMEM130Q8N3G9 435 aa14.01□□□□□ -0.17
RABGGTA-207ENST00000558936 SLC17A8Q8NDX2 589 aa14.01□□□□□ -0.17
RABGGTA-207ENST00000558936 SPPL3Q8TCT6 385 aa14.01□□□□□ -0.17
RABGGTA-207ENST00000558936 HELQQ8TDG4 1101 aa14.01□□□□□ -0.17
RABGGTA-207ENST00000558936 SYMPKQ92797 1274 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-207ENST00000558936 VN1R3Q9BXE9 311 aa14.01□□□□□ -0.17
RABGGTA-207ENST00000558936 HAPLN2Q9GZV7 340 aa14.01□□□□□ -0.17
RABGGTA-207ENST00000558936 ALG13Q9NP73 1137 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-207ENST00000558936 PLAGL2Q9UPG8 496 aa14.01□□□□□ -0.17
RABGGTA-207ENST00000558936 PCDHB2Q9Y5E7 798 aa14.01□□□□□ -0.17
RABGGTA-207ENST00000558936 TCF20Q9UGU0 1960 aaKnown RBP14□□□□□ -0.17
RABGGTA-207ENST00000558936 INO80B-WBP1J3KQ70 363 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 DDHD2O94830 711 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 SFPQP23246 707 aaKnown RBP eCLIP14□□□□□ -0.17
RABGGTA-207ENST00000558936 GTF2F1P35269 517 aaKnown RBP eCLIP14□□□□□ -0.17
RABGGTA-207ENST00000558936 LONP1P36776 959 aaKnown RBP14□□□□□ -0.17
RABGGTA-207ENST00000558936 DNM1Q05193 864 aaKnown RBP14□□□□□ -0.17
RABGGTA-207ENST00000558936 FAM187BQ17R55 369 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 EXOC8Q8IYI6 725 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 KLHL23Q8NBE8 558 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 MCPH1Q8NEM0 835 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 FBXO22Q8NEZ5 403 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 PPM1EQ8WY54 764 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 AK8Q96MA6 479 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 SCLT1Q96NL6 688 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 INO80BQ9C086 356 aaPredicted RBP14□□□□□ -0.17
RABGGTA-207ENST00000558936 IKZF4Q9H2S9 585 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 NXF3Q9H4D5 531 aaKnown RBP14□□□□□ -0.17
RABGGTA-207ENST00000558936 ZSCAN16Q9H4T2 348 aaPredicted RBP14□□□□□ -0.17
RABGGTA-207ENST00000558936 PDZD7Q9H5P4 517 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 PTPRHQ9HD43 1115 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 ARHGAP28Q9P2N2 729 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 DNM3Q9UQ16 869 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 IPPQ9Y573 584 aa14□□□□□ -0.17
RABGGTA-207ENST00000558936 LRRIQ4A6NIV6 560 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 F8W810 466 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 EOMESO95936 686 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 STAG3L1P0CL83 205 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 ZSCAN20P17040 1043 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 GUCY2CP25092 1073 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 NAMPTP43490 491 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 PEX3P56589 373 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 GPM6BQ13491 265 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 GIT2Q14161 759 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 E2F4Q16254 413 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 TWF2Q6IBS0 349 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 ADGRD2Q7Z7M1 963 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 FEZF2Q8TBJ5 459 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 RAD54LQ92698 747 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 SAMD11Q96NU1 681 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 NTPCRQ9BSD7 190 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 FGFBP2Q9BYJ0 223 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 PANK2Q9BZ23 570 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 TMEM117Q9H0C3 514 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 NRDE2Q9H7Z3 1164 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 TBC1D13Q9NVG8 400 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 CACNG4Q9UBN1 327 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 DNAJB4Q9UDY4 337 aa13.99□□□□□ -0.17
RABGGTA-207ENST00000558936 PDCD11Q14690 1871 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 INPPL1O15357 1258 aa13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 EFEMP2O95967 443 aa13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 NCLP19338 710 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 CTNNB1P35222 781 aa13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 ERVFC1P60507 584 aa13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 TFF2Q03403 129 aa13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 COL19A1Q14993 1142 aa13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 NAB2Q15742 525 aa13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 CEP120Q8N960 986 aa13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 COLGALT1Q8NBJ5 622 aa13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 RNF169Q8NCN4 708 aa13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 DNAJC19Q96DA6 116 aa13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 ZBTB45Q96K62 511 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 ZFP42Q96MM3 310 aa13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 REEP2Q9BRK0 252 aa13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 LRFN2Q9ULH4 789 aa13.98□□□□□ -0.17
RABGGTA-207ENST00000558936 ANK1P16157 1881 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 CNTNAP2Q9UHC6 1331 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 MYMKA6NI61 221 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 NT5C1B-RDH14C9J2C7 533 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 ACKR2O00590 384 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 PROZP22891 400 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 AKAP5P24588 427 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 LTBRP36941 435 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 ZNF131P52739 623 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 RBM10P98175 930 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 DHX8Q14562 1220 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 TMEM161BQ8NDZ6 487 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 RAB34Q9BZG1 259 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 DACT1Q9NYF0 836 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 LMCD1Q9NZU5 365 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 DAXXQ9UER7 740 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 RCOR1Q9UKL0 485 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 PCDHA7Q9UN72 937 aa13.97□□□□□ -0.17
RABGGTA-207ENST00000558936 VWA8A3KMH1 1905 aa13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-207ENST00000558936 PTGESO14684 152 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms