RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 CDCA3Q99618 268 aaPredicted RBP15.12■□□□□ 0.01
VPS18-203ENST00000558855 PHF7Q9BWX1 381 aaPredicted RBP15.12■□□□□ 0.01
VPS18-203ENST00000558855 GPRC5CQ9NQ84 441 aa15.12■□□□□ 0.01
VPS18-203ENST00000558855 MIOSQ9NXC5 875 aa15.12■□□□□ 0.01
VPS18-203ENST00000558855 TTLL13PA6NNM8 815 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 MARCH6O60337 910 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 NEMFO60524 1076 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 MED24O75448 989 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 LYPLA2O95372 231 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 EDN1P05305 212 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 EPCAMP16422 314 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 ATP2B1P20020 1258 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 GLRA2P23416 452 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 RARRES1P49788 294 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 MBTD1Q05BQ5 628 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 NBR1Q14596 966 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 SMC1AQ14683 1233 aaKnown RBP15.11■□□□□ 0.01
VPS18-203ENST00000558855 GLB1LQ6UWU2 654 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 SRGAP1Q7Z6B7 1085 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 VPS52Q8N1B4 723 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 FAM122AQ96E09 287 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 POP1Q99575 1024 aaKnown RBP15.11■□□□□ 0.01
VPS18-203ENST00000558855 MTRQ99707 1265 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 NAP1L4Q99733 375 aaKnown RBP15.11■□□□□ 0.01
VPS18-203ENST00000558855 JPH2Q9BR39 696 aaPredicted RBP15.11■□□□□ 0.01
VPS18-203ENST00000558855 MRPL9Q9BYD2 267 aaKnown RBP15.11■□□□□ 0.01
VPS18-203ENST00000558855 INO80BQ9C086 356 aaPredicted RBP15.11■□□□□ 0.01
VPS18-203ENST00000558855 POMKQ9H5K3 350 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 NGRNQ9NPE2 291 aaKnown RBP15.11■□□□□ 0.01
VPS18-203ENST00000558855 MARCH5Q9NX47 278 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 PUF60Q9UHX1 559 aaKnown RBP15.11■□□□□ 0.01
VPS18-203ENST00000558855 PCDHA12Q9UN75 941 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 HCN4Q9Y3Q4 1203 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 VWA8A3KMH1 1905 aa15.11■□□□□ 0.01
VPS18-203ENST00000558855 MTCL1Q9Y4B5 1905 aaKnown RBP15.1■□□□□ 0.01
VPS18-203ENST00000558855 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.1■□□□□ 0.01
VPS18-203ENST00000558855 CXCL14O95715 111 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 POMCP01189 267 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 MCM7P33993 719 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 ARL2P36404 184 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 RAB27AP51159 221 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 PTENP60484 403 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 CDC42EP1Q00587 391 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 KRT17Q04695 432 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 C8orf34Q49A92 452 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 TAS1R1Q7RTX1 841 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
VPS18-203ENST00000558855 SLC22A17Q8WUG5 538 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 BSNDQ8WZ55 320 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 TMEM169Q96HH4 297 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 CXCL16Q9H2A7 254 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 SMOC2Q9H3U7 446 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 NXF3Q9H4D5 531 aaKnown RBP15.1■□□□□ 0.01
VPS18-203ENST00000558855 RSAD1Q9HA92 442 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 CACNG4Q9UBN1 327 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 USP20Q9Y2K6 914 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 PPME1Q9Y570 386 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 IPPQ9Y573 584 aa15.1■□□□□ 0.01
VPS18-203ENST00000558855 USO1O60763 962 aaKnown RBP15.09■□□□□ 0.01
VPS18-203ENST00000558855 DKC1O60832 514 aaKnown RBP eCLIP15.09■□□□□ 0.01
VPS18-203ENST00000558855 BAG4O95429 457 aaKnown RBP15.09■□□□□ 0.01
VPS18-203ENST00000558855 SSBP05455 408 aaKnown RBP eCLIP15.09■□□□□ 0.01
VPS18-203ENST00000558855 CTSAP10619 480 aa15.09■□□□□ 0.01
VPS18-203ENST00000558855 ARF4P18085 180 aaPredicted RBP15.09■□□□□ 0.01
VPS18-203ENST00000558855 NCLP19338 710 aaKnown RBP15.09■□□□□ 0.01
VPS18-203ENST00000558855 CA8P35219 290 aa15.09■□□□□ 0.01
VPS18-203ENST00000558855 ALDH7A1P49419 539 aaKnown RBP15.09■□□□□ 0.01
VPS18-203ENST00000558855 PTPN14Q15678 1187 aa15.09■□□□□ 0.01
VPS18-203ENST00000558855 ECM1Q16610 540 aa15.09■□□□□ 0.01
VPS18-203ENST00000558855 POTEGQ6S5H5 508 aa15.09■□□□□ 0.01
VPS18-203ENST00000558855 MAEAQ7L5Y9 396 aa15.09■□□□□ 0.01
VPS18-203ENST00000558855 DDX53Q86TM3 631 aaKnown RBP15.09■□□□□ 0.01
VPS18-203ENST00000558855 EDAQ92838 391 aa15.09■□□□□ 0.01
VPS18-203ENST00000558855 ZFP42Q96MM3 310 aa15.09■□□□□ 0.01
VPS18-203ENST00000558855 POLR3FQ9H1D9 316 aaPredicted RBP15.09■□□□□ 0.01
VPS18-203ENST00000558855 BRMS1Q9HCU9 246 aa15.09■□□□□ 0.01
VPS18-203ENST00000558855 ANKEF1Q9NU02 776 aa15.09■□□□□ 0.01
VPS18-203ENST00000558855 DOCK6Q96HP0 2047 aa15.09■□□□□ 0.01
VPS18-203ENST00000558855 INO80B-WBP1J3KQ70 363 aa15.08■□□□□ 0
VPS18-203ENST00000558855 NRP1O14786 923 aa15.08■□□□□ 0
VPS18-203ENST00000558855 EFEMP2O95967 443 aa15.08■□□□□ 0
VPS18-203ENST00000558855 SKIP12755 728 aa15.08■□□□□ 0
VPS18-203ENST00000558855 HOXD11P31277 338 aaPredicted RBP15.08■□□□□ 0
VPS18-203ENST00000558855 MLH1P40692 756 aa15.08■□□□□ 0
VPS18-203ENST00000558855 SCNN1GP51170 649 aa15.08■□□□□ 0
VPS18-203ENST00000558855 ZXDAP98168 799 aa15.08■□□□□ 0
VPS18-203ENST00000558855 RNASELQ05823 741 aaKnown RBP15.08■□□□□ 0
VPS18-203ENST00000558855 ZNF174Q15697 407 aa15.08■□□□□ 0
VPS18-203ENST00000558855 RARS2Q5T160 578 aaKnown RBP15.08■□□□□ 0
VPS18-203ENST00000558855 ERICH6BQ5W0A0 696 aa15.08■□□□□ 0
VPS18-203ENST00000558855 OTUD6AQ7L8S5 288 aa15.08■□□□□ 0
VPS18-203ENST00000558855 CATSPER3Q86XQ3 398 aa15.08■□□□□ 0
VPS18-203ENST00000558855 GSTCDQ8NEC7 633 aa15.08■□□□□ 0
VPS18-203ENST00000558855 TCP11Q8WWU5 503 aa15.08■□□□□ 0
VPS18-203ENST00000558855 GAD1Q99259 594 aa15.08■□□□□ 0
VPS18-203ENST00000558855 APOL6Q9BWW8 343 aa15.08■□□□□ 0
VPS18-203ENST00000558855 POLD4Q9HCU8 107 aa15.08■□□□□ 0
VPS18-203ENST00000558855 C2CD4DB7Z1M9 353 aa15.07■□□□□ 0
VPS18-203ENST00000558855 GAS2O43903 313 aaKnown RBP15.07■□□□□ 0
VPS18-203ENST00000558855 LILRB3O75022 631 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms