RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 PLEKHA8P1O95397 391 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 ITGB5P18084 799 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 CD52P31358 61 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 IGBP1P78318 339 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 MRPS6P82932 125 aaKnown RBP11.06□□□□□ -0.64
SPG11-212ENST00000558790 HIF1AQ16665 826 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 TTC22Q5TAA0 569 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 BTLAQ7Z6A9 289 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 ADGRD2Q7Z7M1 963 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 RSPH3Q86UC2 560 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 ZNF654Q8IZM8 581 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 FBXL6Q8N531 539 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 GIMAP8Q8ND71 665 aaPredicted RBP11.06□□□□□ -0.64
SPG11-212ENST00000558790 NCOA7Q8NI08 942 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 GPRASP2Q96D09 838 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 RRP36Q96EU6 259 aaKnown RBP11.06□□□□□ -0.64
SPG11-212ENST00000558790 CEP63Q96MT8 703 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 PLVAPQ9BX97 442 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 UPF3BQ9BZI7 483 aaKnown RBP11.06□□□□□ -0.64
SPG11-212ENST00000558790 FAM49AQ9H0Q0 323 aaPredicted RBP11.06□□□□□ -0.64
SPG11-212ENST00000558790 IGFLR1Q9H665 355 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 LY9Q9HBG7 655 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 SEC63Q9UGP8 760 aaKnown RBP11.06□□□□□ -0.64
SPG11-212ENST00000558790 DMGDHQ9UI17 866 aaKnown RBP11.06□□□□□ -0.64
SPG11-212ENST00000558790 PLAGL2Q9UPG8 496 aa11.06□□□□□ -0.64
SPG11-212ENST00000558790 PROB1E7EW31 1015 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 H3BM21 787 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 STXBP3O00186 592 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 ATXN7O15265 892 aaPredicted RBP11.05□□□□□ -0.64
SPG11-212ENST00000558790 DDAH1O94760 285 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 MICAL2O94851 1124 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 ITGB1P05556 798 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 NDUFV1P49821 464 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 IDH3AP50213 366 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 MTMR1Q13613 665 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 UBE2SQ16763 222 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 PAN2Q504Q3 1202 aaKnown RBP11.05□□□□□ -0.64
SPG11-212ENST00000558790 CMTR2Q8IYT2 770 aaKnown RBP11.05□□□□□ -0.64
SPG11-212ENST00000558790 CTCFLQ8NI51 663 aaPredicted RBP11.05□□□□□ -0.64
SPG11-212ENST00000558790 EXOC6Q8TAG9 804 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 IGDCC4Q8TDY8 1250 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 GLG1Q92896 1179 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 P2RX5Q93086 422 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 ABHD17AQ96GS6 310 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 MSLNLQ96KJ4 702 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 USP20Q9Y2K6 914 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 PCDHGC5Q9Y5F6 944 aa11.05□□□□□ -0.64
SPG11-212ENST00000558790 KHNYNO15037 678 aaKnown RBP11.04□□□□□ -0.64
SPG11-212ENST00000558790 GLP2RO95838 553 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 RXRAP19793 462 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 CHMLP26374 656 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 KIF5BP33176 963 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 EIF1AXP47813 144 aaKnown RBP11.04□□□□□ -0.64
SPG11-212ENST00000558790 GATMP50440 423 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 TYRO3Q06418 890 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 TMEM62Q0P6H9 643 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 ADAM15Q13444 863 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 COL9A3Q14050 684 aaPredicted RBP11.04□□□□□ -0.64
SPG11-212ENST00000558790 LBRQ14739 615 aaKnown RBP11.04□□□□□ -0.64
SPG11-212ENST00000558790 ECM1Q16610 540 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 IER5Q5VY09 327 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 SV2AQ7L0J3 742 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 NPAS4Q8IUM7 802 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 SUGP1Q8IWZ8 645 aaKnown RBP11.04□□□□□ -0.64
SPG11-212ENST00000558790 CMTR1Q8N1G2 835 aaKnown RBP11.04□□□□□ -0.64
SPG11-212ENST00000558790 SRBD1Q8N5C6 995 aaKnown RBP11.04□□□□□ -0.64
SPG11-212ENST00000558790 KLHL23Q8NBE8 558 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 SMRP1Q8NCR6 262 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 TRAPPC12Q8WVT3 735 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 SEPT1Q8WYJ6 367 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 CDHR1Q96JP9 859 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 PCYT2Q99447 389 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 MAP3K14Q99558 947 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 PRRX2Q99811 253 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 SMARCAD1Q9H4L7 1026 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 JPH1Q9HDC5 661 aaPredicted RBP11.04□□□□□ -0.64
SPG11-212ENST00000558790 CLEC1BQ9P126 229 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 BARX2Q9UMQ3 279 aaPredicted RBP11.04□□□□□ -0.64
SPG11-212ENST00000558790 TRPV2Q9Y5S1 764 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 UBIAD1Q9Y5Z9 338 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 IGSF9BQ9UPX0 1349 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 ASPMQ8IZT6 3477 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 DENND4AQ7Z401 1863 aa11.04□□□□□ -0.64
SPG11-212ENST00000558790 FASNP49327 2511 aaKnown RBP11.03□□□□□ -0.64
SPG11-212ENST00000558790 hCG_1642624A0A1W2PR95 340 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 TERTO14746 1132 aaKnown RBP11.03□□□□□ -0.64
SPG11-212ENST00000558790 SGSM2O43147 1006 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 BNIP3LO60238 219 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 EYA4O95677 639 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 PDGFBP01127 241 aaPredicted RBP11.03□□□□□ -0.64
SPG11-212ENST00000558790 SCG2P13521 617 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 INSRRP14616 1297 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 NRIP1P48552 1158 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 PAK2Q13177 524 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 SAMD5Q5TGI4 173 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 FIGNL1Q6PIW4 674 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 RTN4RL1Q86UN2 441 aaPredicted RBP11.03□□□□□ -0.64
SPG11-212ENST00000558790 RAB11FIP4Q86YS3 637 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 EFHBQ8N7U6 833 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 SPPL3Q8TCT6 385 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms