RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 PAN2Q504Q3 1202 aaKnown RBP13.63□□□□□ -0.23
SMAD3-205ENST00000558428 SPRED2Q7Z698 418 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 FIBCD1Q8N539 461 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 ARNTL2Q8WYA1 636 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 CCDC51Q96ER9 411 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 GUCD1Q96NT3 240 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 TGS1Q96RS0 853 aaKnown RBP13.63□□□□□ -0.23
SMAD3-205ENST00000558428 TRAIPQ9BWF2 469 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 SCAND2PQ9GZW5 306 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-205ENST00000558428 CCDC113Q9H0I3 377 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 FZD8Q9H461 694 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 PRDM12Q9H4Q4 367 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 FAM13BQ9NYF5 915 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 MTUS1Q9ULD2 1270 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 RALGAPA2Q2PPJ7 1873 aa13.63□□□□□ -0.23
SMAD3-205ENST00000558428 K7ERI5 159 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 SLC16A4O15374 487 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 HOXA2O43364 376 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 TBCAO75347 108 aaKnown RBP13.62□□□□□ -0.23
SMAD3-205ENST00000558428 FAM13AO94988 1023 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 ATF7P17544 494 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-205ENST00000558428 SMTNP53814 917 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 PRPF4BQ13523 1007 aaKnown RBP13.62□□□□□ -0.23
SMAD3-205ENST00000558428 GIT2Q14161 759 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 LONRF3Q496Y0 759 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 UBXN11Q5T124 520 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 RESP18Q5W5W9 173 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 DYMQ7RTS9 669 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 ZNF598Q86UK7 904 aaKnown RBP13.62□□□□□ -0.23
SMAD3-205ENST00000558428 CMTR2Q8IYT2 770 aaKnown RBP13.62□□□□□ -0.23
SMAD3-205ENST00000558428 ABI1Q8IZP0 508 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 MYCT1Q8N699 235 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 DHX58Q96C10 678 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 CDX2Q99626 313 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-205ENST00000558428 EIF2AQ9BY44 585 aaKnown RBP13.62□□□□□ -0.23
SMAD3-205ENST00000558428 ZHX3Q9H4I2 956 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 PARVGQ9HBI0 331 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 GDPD2Q9HCC8 539 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 LARSQ9P2J5 1176 aaKnown RBP13.62□□□□□ -0.23
SMAD3-205ENST00000558428 ARHGAP28Q9P2N2 729 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 KCNG1Q9UIX4 513 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 PCDHB2Q9Y5E7 798 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 KIAA1671Q9BY89 1806 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 PHLPP2Q6ZVD8 1323 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 CNTNAP2Q9UHC6 1331 aa13.62□□□□□ -0.23
SMAD3-205ENST00000558428 ACKR2O00590 384 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 POLR2DO15514 142 aaKnown RBP13.61□□□□□ -0.23
SMAD3-205ENST00000558428 ZNF623O75123 536 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 ERVK-21P61565 698 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 E2F4Q16254 413 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 TPRNQ4KMQ1 711 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 ADALQ6DHV7 355 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 CDR2LQ86X02 465 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-205ENST00000558428 IQUBQ8NA54 791 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 SPIRE2Q8WWL2 714 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 MYLIPQ8WY64 445 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 DDX12PQ92771 950 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 LPPQ93052 612 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 PGBD4Q96DM1 585 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 C17orf80Q9BSJ5 609 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 TRIM6Q9C030 488 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-205ENST00000558428 TMEM117Q9H0C3 514 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 CUEDC2Q9H467 287 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 TMEM134Q9H6X4 195 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 RNF19AQ9NV58 838 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 CIZ1Q9ULV3 898 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-205ENST00000558428 USP20Q9Y2K6 914 aa13.61□□□□□ -0.23
SMAD3-205ENST00000558428 RBM19Q9Y4C8 960 aaKnown RBP13.61□□□□□ -0.23
SMAD3-205ENST00000558428 MRPL42Q9Y6G3 142 aaKnown RBP13.61□□□□□ -0.23
SMAD3-205ENST00000558428 A0A1B0GUA9 196 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 EPOPA6NHQ4 379 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 MYMKA6NI61 221 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 TTLL13PA6NNM8 815 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 RFXAPO00287 272 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 N4BP3O15049 544 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 TRANK1O15050 2925 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 NPTXRO95502 500 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 EDN1P05305 212 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 CTNNB1P35222 781 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 ZNF131P52739 623 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 CLLU1OSQ5K130 101 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 SPOUT1Q5T280 376 aaKnown RBP13.6□□□□□ -0.23
SMAD3-205ENST00000558428 SLC27A1Q6PCB7 646 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 TMEM192Q8IY95 271 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 TMEM161BQ8NDZ6 487 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 CNNM3Q8NE01 707 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 FBXO22Q8NEZ5 403 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 HELQQ8TDG4 1101 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 STAMQ92783 540 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 SAMD11Q96NU1 681 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 CASD1Q96PB1 797 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 GAS2L1Q99501 681 aaPredicted RBP13.6□□□□□ -0.23
SMAD3-205ENST00000558428 NTPCRQ9BSD7 190 aaKnown RBP13.6□□□□□ -0.23
SMAD3-205ENST00000558428 KCNH3Q9ULD8 1083 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 RWDD3Q9Y3V2 267 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 IPPQ9Y573 584 aa13.6□□□□□ -0.23
SMAD3-205ENST00000558428 COL4A4P53420 1690 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-205ENST00000558428 COL6A3P12111 3177 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 A0A1B0GVL5 298 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 MEIS3P2A8K0S8 358 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms