RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 PHC3Q8NDX5 983 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 GDAP1Q8TB36 358 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 C18orf8Q96DM3 657 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 NR1H4Q96RI1 486 aaPredicted RBP12.04□□□□□ -0.48
PCAT29-201ENST00000558411 UBE2OQ9C0C9 1292 aaKnown RBP12.04□□□□□ -0.48
PCAT29-201ENST00000558411 KIAA1683Q9H0B3 1180 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 KCTD10Q9H3F6 313 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 METTL14Q9HCE5 456 aaKnown RBP12.04□□□□□ -0.48
PCAT29-201ENST00000558411 C6orf50Q9HD87 102 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 MAD2L2Q9UI95 211 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 HAO1Q9UJM8 370 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 PASKQ96RG2 1323 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 ZSCAN9O15535 394 aaPredicted RBP12.04□□□□□ -0.48
PCAT29-201ENST00000558411 ATP9AO75110 1047 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 T-ENOLP0DO92 83 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 SLC9A1P19634 815 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 GSTT1P30711 240 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 HADHBP55084 474 aaKnown RBP12.04□□□□□ -0.48
PCAT29-201ENST00000558411 MOGSQ13724 837 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 MPP2Q14168 576 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 KCTD19Q17RG1 926 aaPredicted RBP12.04□□□□□ -0.48
PCAT29-201ENST00000558411 FAM47AQ5JRC9 791 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 KRT79Q5XKE5 535 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 OTUD6AQ7L8S5 288 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 PRELID2Q8N945 189 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 PNMA1Q8ND90 353 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 TTC8Q8TAM2 541 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 CTNNBL1Q8WYA6 563 aaPredicted RBP12.04□□□□□ -0.48
PCAT29-201ENST00000558411 NDNQ99608 321 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 CDC42EP4Q9H3Q1 356 aaKnown RBP12.04□□□□□ -0.48
PCAT29-201ENST00000558411 SAR1AQ9NR31 198 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 WNK3Q9BYP7 1800 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 TSPY2A6NKD2 308 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 CREB1P16220 341 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 EPHB2P29323 1055 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 COPB2P35606 906 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 TXKP42681 527 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 CCDC6Q16204 474 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 CALCRLQ16602 461 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 SBK1Q52WX2 424 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 SNX30Q5VWJ9 437 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 ARMC3Q5W041 872 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 BICDL1Q6ZP65 573 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 C4orf50Q6ZRC1 276 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 KRT28Q7Z3Y7 464 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 NELFCDQ8IXH7 590 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 CCDC65Q8IXS2 484 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 UBL4BQ8N7F7 174 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 PLEKHG4BQ96PX9 1271 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 CRAMP1Q96RY5 1269 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 OSGEPQ9NPF4 335 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 BMP2KQ9NSY1 1161 aaPredicted RBP12.03□□□□□ -0.48
PCAT29-201ENST00000558411 PCDHA2Q9Y5H9 948 aa12.03□□□□□ -0.48
PCAT29-201ENST00000558411 H0Y3Z8 333 aa12.02□□□□□ -0.48
PCAT29-201ENST00000558411 ENTPD5O75356 428 aa12.02□□□□□ -0.48
PCAT29-201ENST00000558411 GH1P01241 217 aa12.02□□□□□ -0.48
PCAT29-201ENST00000558411 DYNLL1P63167 89 aaKnown RBP12.02□□□□□ -0.48
PCAT29-201ENST00000558411 RNASELQ05823 741 aaKnown RBP12.02□□□□□ -0.48
PCAT29-201ENST00000558411 AP1B1Q10567 949 aa12.02□□□□□ -0.48
PCAT29-201ENST00000558411 GIT2Q14161 759 aa12.02□□□□□ -0.48
PCAT29-201ENST00000558411 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.48
PCAT29-201ENST00000558411 C11orf63Q6NUN7 778 aa12.02□□□□□ -0.48
PCAT29-201ENST00000558411 CCDC137Q6PK04 289 aaKnown RBP12.02□□□□□ -0.48
PCAT29-201ENST00000558411 ADAT2Q7Z6V5 191 aaKnown RBP12.02□□□□□ -0.48
PCAT29-201ENST00000558411 DNAAF5Q86Y56 855 aa12.02□□□□□ -0.48
PCAT29-201ENST00000558411 SNX29Q8TEQ0 813 aa12.02□□□□□ -0.48
PCAT29-201ENST00000558411 SCG3Q8WXD2 468 aaKnown RBP12.02□□□□□ -0.48
PCAT29-201ENST00000558411 LZICQ8WZA0 190 aa12.02□□□□□ -0.48
PCAT29-201ENST00000558411 NT5C3AQ9H0P0 336 aa12.02□□□□□ -0.48
PCAT29-201ENST00000558411 DDX43Q9NXZ2 648 aaKnown RBP12.02□□□□□ -0.48
PCAT29-201ENST00000558411 WHRNQ9P202 907 aa12.02□□□□□ -0.48
PCAT29-201ENST00000558411 ARPP21Q9UBL0 812 aaPredicted RBP12.02□□□□□ -0.48
PCAT29-201ENST00000558411 TRMT112Q9UI30 125 aaKnown RBP12.02□□□□□ -0.48
PCAT29-201ENST00000558411 RTCBQ9Y3I0 505 aaKnown RBP12.02□□□□□ -0.48
PCAT29-201ENST00000558411 GMEB1Q9Y692 573 aa12.02□□□□□ -0.48
PCAT29-201ENST00000558411 ROBO3Q96MS0 1386 aa12.02□□□□□ -0.48
PCAT29-201ENST00000558411 ZNF804BA4D1E1 1349 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 GTPBP10A4D1E9 387 aaKnown RBP12.02□□□□□ -0.49
PCAT29-201ENST00000558411 SMAPO00193 183 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 CYTH3O43739 400 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 PLCG2P16885 1265 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 FOXN2P32314 431 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 STAT1P42224 750 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 SLC18A1P54219 525 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 SLC34A1Q06495 639 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 CALCOCO2Q13137 446 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 TCEAL1Q15170 157 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 EPHA7Q15375 998 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 SLC35G1Q2M3R5 365 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 TTC27Q6P3X3 843 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 LRRC74BQ6ZQY2 392 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 PPFIBP2Q8ND30 876 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 STKLD1Q8NE28 680 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 OLIG1Q8TAK6 271 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 LNX1Q8TBB1 728 aaPredicted RBP12.02□□□□□ -0.49
PCAT29-201ENST00000558411 ALG3Q92685 438 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 HAPLN3Q96S86 360 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 ORAI2Q96SN7 254 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 ZCWPW1Q9H0M4 648 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 SIX2Q9NPC8 291 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms