RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 TM4SF20Q53R12 229 aa7.89□□□□□ -1.15
RTF1-204ENST00000558117 NT5DC1Q5TFE4 455 aa7.89□□□□□ -1.15
RTF1-204ENST00000558117 HHIPL2Q6UWX4 724 aa7.89□□□□□ -1.15
RTF1-204ENST00000558117 LRRTM3Q86VH5 581 aa7.89□□□□□ -1.15
RTF1-204ENST00000558117 NOSTRINQ8IVI9 506 aa7.89□□□□□ -1.15
RTF1-204ENST00000558117 ZDHHC14Q8IZN3 488 aa7.89□□□□□ -1.15
RTF1-204ENST00000558117 C2orf69Q8N8R5 385 aa7.89□□□□□ -1.15
RTF1-204ENST00000558117 ADAMTS17Q8TE56 1095 aa7.89□□□□□ -1.15
RTF1-204ENST00000558117 L2HGDHQ9H9P8 463 aa7.89□□□□□ -1.15
RTF1-204ENST00000558117 ADAMTS20P59510 1910 aa7.88□□□□□ -1.15
RTF1-204ENST00000558117 OTOL1A6NHN0 477 aaPredicted RBP7.88□□□□□ -1.15
RTF1-204ENST00000558117 SCDO00767 359 aa7.88□□□□□ -1.15
RTF1-204ENST00000558117 CLASP2O75122 1294 aaKnown RBP7.88□□□□□ -1.15
RTF1-204ENST00000558117 FBXO21O94952 628 aa7.88□□□□□ -1.15
RTF1-204ENST00000558117 ENO2P09104 434 aaPredicted RBP7.88□□□□□ -1.15
RTF1-204ENST00000558117 ZBTB48P10074 688 aaPredicted RBP7.88□□□□□ -1.15
RTF1-204ENST00000558117 HOXA5P20719 270 aa7.88□□□□□ -1.15
RTF1-204ENST00000558117 CFAP100Q494V2 611 aa7.88□□□□□ -1.15
RTF1-204ENST00000558117 CD276Q5ZPR3 534 aa7.88□□□□□ -1.15
RTF1-204ENST00000558117 DDX1Q92499 740 aaKnown RBP7.88□□□□□ -1.15
RTF1-204ENST00000558117 WNK4Q96J92 1243 aa7.88□□□□□ -1.15
RTF1-204ENST00000558117 TARS2Q9BW92 718 aaKnown RBP7.88□□□□□ -1.15
RTF1-204ENST00000558117 KRTAP9-9Q9BYP9 154 aa7.88□□□□□ -1.15
RTF1-204ENST00000558117 KRTAP9-4Q9BYQ2 154 aa7.88□□□□□ -1.15
RTF1-204ENST00000558117 ARID1BQ8NFD5 2236 aaPredicted RBP7.88□□□□□ -1.15
RTF1-204ENST00000558117 PIEZO1Q92508 2521 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 PRAMEF25A6NGN4 478 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 H0YGN5 161 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 DDX3XO00571 662 aaKnown RBP eCLIP7.87□□□□□ -1.15
RTF1-204ENST00000558117 C4BPAP04003 597 aaKnown RBP7.87□□□□□ -1.15
RTF1-204ENST00000558117 CTSWP56202 376 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 NOGQ13253 232 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 PCBP1Q15365 356 aaKnown RBP eCLIP7.87□□□□□ -1.15
RTF1-204ENST00000558117 FAM26FQ5R3K3 315 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 PHF19Q5T6S3 580 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 UBE2R2Q712K3 238 aaPredicted RBP7.87□□□□□ -1.15
RTF1-204ENST00000558117 ZNF761Q86XN6 746 aaPredicted RBP7.87□□□□□ -1.15
RTF1-204ENST00000558117 DTX3Q8N9I9 347 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 FAM122AQ96E09 287 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 MFSD3Q96ES6 412 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 XYLT2Q9H1B5 865 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 RNF186Q9NXI6 227 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 ARHGAP28Q9P2N2 729 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 PLAAQ9Y263 795 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 DICER1Q9UPY3 1922 aaKnown RBP7.87□□□□□ -1.15
RTF1-204ENST00000558117 MAP2P11137 1827 aaKnown RBP7.87□□□□□ -1.15
RTF1-204ENST00000558117 HTTP42858 3142 aa7.87□□□□□ -1.15
RTF1-204ENST00000558117 MUC3AQ02505 3323 aa7.86□□□□□ -1.15
RTF1-204ENST00000558117 SLC12A8A0AV02 714 aa7.86□□□□□ -1.15
RTF1-204ENST00000558117 POLRMTO00411 1230 aaKnown RBP7.86□□□□□ -1.15
RTF1-204ENST00000558117 KPNA6O60684 536 aa7.86□□□□□ -1.15
RTF1-204ENST00000558117 HIP1RO75146 1068 aa7.86□□□□□ -1.15
RTF1-204ENST00000558117 CYP1A1P04798 512 aaPredicted RBP7.86□□□□□ -1.15
RTF1-204ENST00000558117 FLT3P36888 993 aa7.86□□□□□ -1.15
RTF1-204ENST00000558117 NEK4P51957 841 aa7.86□□□□□ -1.15
RTF1-204ENST00000558117 RTP5Q14D33 572 aa7.86□□□□□ -1.15
RTF1-204ENST00000558117 SKIDA1Q1XH10 827 aa7.86□□□□□ -1.15
RTF1-204ENST00000558117 PRR31Q5SQ13 230 aa7.86□□□□□ -1.15
RTF1-204ENST00000558117 MCTP2Q6DN12 878 aa7.86□□□□□ -1.15
RTF1-204ENST00000558117 TRMT10BQ6PF06 316 aaKnown RBP7.86□□□□□ -1.15
RTF1-204ENST00000558117 OTOP1Q7RTM1 612 aa7.86□□□□□ -1.15
RTF1-204ENST00000558117 FAM124AQ86V42 546 aa7.86□□□□□ -1.15
RTF1-204ENST00000558117 ARHGAP20Q9P2F6 1191 aa7.86□□□□□ -1.15
RTF1-204ENST00000558117 FTSJ1Q9UET6 329 aa7.86□□□□□ -1.15
RTF1-204ENST00000558117 RNF123Q5XPI4 1314 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 TTC21BQ7Z4L5 1316 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 ZNF541Q9H0D2 1346 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 KIAA0100Q14667 2235 aaKnown RBP7.85□□□□□ -1.15
RTF1-204ENST00000558117 A0A087X0B3 334 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 ZNF839A8K0R7 811 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 CBX4O00257 560 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 KRT37O76014 449 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 ZNF28P17035 718 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 RFC4P35249 363 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 PFKPQ01813 784 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 NFIXQ14938 502 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 ERICH6BQ5W0A0 696 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 FRMD5Q7Z6J6 570 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 CHST14Q8NCH0 376 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 PIGBQ92521 554 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 PRO3102Q9H379 93 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 ZFP69BQ9UJL9 534 aa7.85□□□□□ -1.15
RTF1-204ENST00000558117 PTPDC1A2A3K4 754 aa7.84□□□□□ -1.15
RTF1-204ENST00000558117 POU3F2P20265 443 aaPredicted RBP7.84□□□□□ -1.15
RTF1-204ENST00000558117 TM4SF1P30408 202 aa7.84□□□□□ -1.15
RTF1-204ENST00000558117 IL13P35225 146 aa7.84□□□□□ -1.15
RTF1-204ENST00000558117 GLRBP48167 497 aa7.84□□□□□ -1.15
RTF1-204ENST00000558117 IRF9Q00978 393 aa7.84□□□□□ -1.15
RTF1-204ENST00000558117 KIAA2012Q0VF49 1180 aa7.84□□□□□ -1.15
RTF1-204ENST00000558117 DBPQ10586 325 aaPredicted RBP7.84□□□□□ -1.15
RTF1-204ENST00000558117 SKOR2Q2VWA4 1001 aaPredicted RBP7.84□□□□□ -1.15
RTF1-204ENST00000558117 EGFLAMQ63HQ2 1017 aa7.84□□□□□ -1.15
RTF1-204ENST00000558117 PKN3Q6P5Z2 889 aa7.84□□□□□ -1.15
RTF1-204ENST00000558117 FBXO46Q6PJ61 603 aaPredicted RBP7.84□□□□□ -1.15
RTF1-204ENST00000558117 TXNDC5Q8NBS9 432 aaKnown RBP7.84□□□□□ -1.15
RTF1-204ENST00000558117 IGDCC4Q8TDY8 1250 aa7.84□□□□□ -1.15
RTF1-204ENST00000558117 DLG3Q92796 817 aa7.84□□□□□ -1.15
RTF1-204ENST00000558117 TAOK3Q9H2K8 898 aa7.84□□□□□ -1.15
RTF1-204ENST00000558117 SLC39A2Q9NP94 309 aa7.84□□□□□ -1.15
RTF1-204ENST00000558117 RTEL1Q9NZ71 1219 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms