RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 TTI1O43156 1089 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 ITGA4P13612 1032 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 HSPA6P17066 643 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 GBP1P32455 592 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 DHX34Q14147 1143 aaKnown RBP14.28□□□□□ -0.12
CPNE6-204ENST00000557829 PLS1Q14651 629 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 SUPT20HL1Q3ZLR7 823 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 RINT1Q6NUQ1 792 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 STXBP4Q6ZWJ1 553 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 FAM186BQ8IYM0 893 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 SCYL3Q8IZE3 742 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 SLC35G2Q8TBE7 412 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 TLCD1Q96CP7 247 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 HOOK2Q96ED9 719 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 GOPCQ9HD26 462 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 PPANQ9NQ55 473 aaKnown RBP14.28□□□□□ -0.12
CPNE6-204ENST00000557829 FRMPD4Q14CM0 1322 aa14.28□□□□□ -0.12
CPNE6-204ENST00000557829 GOLGA6L10A0A0M3HER8 536 aa14.27□□□□□ -0.12
CPNE6-204ENST00000557829 MSH4O15457 936 aa14.27□□□□□ -0.12
CPNE6-204ENST00000557829 USP2O75604 605 aaPredicted RBP14.27□□□□□ -0.12
CPNE6-204ENST00000557829 FMO5P49326 533 aa14.27□□□□□ -0.12
CPNE6-204ENST00000557829 DHX9Q08211 1270 aaKnown RBP14.27□□□□□ -0.12
CPNE6-204ENST00000557829 ODF2Q5BJF6 829 aa14.27□□□□□ -0.12
CPNE6-204ENST00000557829 DUPD1Q68J44 220 aa14.27□□□□□ -0.12
CPNE6-204ENST00000557829 CCDC121Q6ZUS5 278 aa14.27□□□□□ -0.12
CPNE6-204ENST00000557829 HOOK3Q86VS8 718 aa14.27□□□□□ -0.12
CPNE6-204ENST00000557829 FBXO11Q86XK2 927 aa14.27□□□□□ -0.12
CPNE6-204ENST00000557829 OR2W6PQ8NHA6 318 aa14.27□□□□□ -0.12
CPNE6-204ENST00000557829 CTNNBL1Q8WYA6 563 aaPredicted RBP14.27□□□□□ -0.12
CPNE6-204ENST00000557829 EIF2AK1Q9BQI3 630 aaKnown RBP14.27□□□□□ -0.12
CPNE6-204ENST00000557829 RUSC1Q9BVN2 902 aa14.27□□□□□ -0.12
CPNE6-204ENST00000557829 BHMT2Q9H2M3 363 aa14.27□□□□□ -0.12
CPNE6-204ENST00000557829 CENPHQ9H3R5 247 aa14.27□□□□□ -0.12
CPNE6-204ENST00000557829 DDX20Q9UHI6 824 aaKnown RBP14.27□□□□□ -0.12
CPNE6-204ENST00000557829 NOVA2Q9UNW9 492 aaKnown RBP14.27□□□□□ -0.12
CPNE6-204ENST00000557829 FAM86B1E9PN63 330 aa14.27□□□□□ -0.13
CPNE6-204ENST00000557829 PIK3CDO00329 1044 aa14.27□□□□□ -0.13
CPNE6-204ENST00000557829 BUB1BO60566 1050 aaPredicted RBP14.27□□□□□ -0.13
CPNE6-204ENST00000557829 NUDT17P0C025 328 aa14.27□□□□□ -0.13
CPNE6-204ENST00000557829 FAM86B2P0C5J1 330 aa14.27□□□□□ -0.13
CPNE6-204ENST00000557829 FLT3P36888 993 aa14.27□□□□□ -0.13
CPNE6-204ENST00000557829 IFT88Q13099 833 aa14.27□□□□□ -0.13
CPNE6-204ENST00000557829 MYBPC2Q14324 1141 aa14.27□□□□□ -0.13
CPNE6-204ENST00000557829 LACTB2Q53H82 288 aaPredicted RBP14.27□□□□□ -0.13
CPNE6-204ENST00000557829 RNF187Q5TA31 235 aaPredicted RBP14.27□□□□□ -0.13
CPNE6-204ENST00000557829 SYDE2Q5VT97 1194 aa14.27□□□□□ -0.13
CPNE6-204ENST00000557829 FMO2Q99518 471 aa14.27□□□□□ -0.13
CPNE6-204ENST00000557829 P2RX7Q99572 595 aaKnown RBP14.27□□□□□ -0.13
CPNE6-204ENST00000557829 ERP44Q9BS26 406 aa14.27□□□□□ -0.13
CPNE6-204ENST00000557829 DMAC2Q9NW81 257 aa14.27□□□□□ -0.13
CPNE6-204ENST00000557829 DNAJC12Q9UKB3 198 aa14.27□□□□□ -0.13
CPNE6-204ENST00000557829 PCDHB13Q9Y5F0 798 aa14.27□□□□□ -0.13
CPNE6-204ENST00000557829 ZMYM2Q9UBW7 1377 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 GOLGA6L7A0A1B0GV03 622 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 ANKRD62A6NC57 917 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 RSPH10B2B2RC85 870 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 CLIC2O15247 247 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 FAM13AO94988 1023 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 FGGP02679 453 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 RSPH10BP0C881 870 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 TAL1P17542 331 aaPredicted RBP14.26□□□□□ -0.13
CPNE6-204ENST00000557829 MNAT1P51948 309 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 TRAF1Q13077 416 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 DRAP1Q14919 205 aaPredicted RBP14.26□□□□□ -0.13
CPNE6-204ENST00000557829 ATP8B4Q8TF62 1192 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 ZC3H15Q8WU90 426 aaKnown RBP14.26□□□□□ -0.13
CPNE6-204ENST00000557829 RAPGEF5Q92565 580 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 HSD17B14Q9BPX1 270 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 GINM1Q9NU53 330 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 KCND2Q9NZV8 630 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 IQCA1LA6NCM1 817 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 RASSF9O75901 435 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 GHRP10912 638 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 PTPRAP18433 802 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 BYSLQ13895 437 aaKnown RBP14.26□□□□□ -0.13
CPNE6-204ENST00000557829 KIF22Q14807 665 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 KRT71Q3SY84 523 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 GJB7Q6PEY0 223 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 BTNL9Q6UXG8 535 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 C1orf186Q6ZWK4 172 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 SLC9A9Q8IVB4 645 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 RHOT2Q8IXI1 618 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.26□□□□□ -0.13
CPNE6-204ENST00000557829 TATDN2Q93075 761 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 SEC16BQ96JE7 1060 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 UIMC1Q96RL1 719 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 ZDHHC18Q9NUE0 388 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 BCCIPQ9P287 314 aaKnown RBP eCLIP14.26□□□□□ -0.13
CPNE6-204ENST00000557829 CNOT8Q9UFF9 292 aaKnown RBP14.26□□□□□ -0.13
CPNE6-204ENST00000557829 RASAL2Q9UJF2 1139 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 PPP1R9AQ9ULJ8 1098 aa14.26□□□□□ -0.13
CPNE6-204ENST00000557829 PFASO15067 1338 aa14.25□□□□□ -0.13
CPNE6-204ENST00000557829 MIF4GDA9UHW6 222 aaKnown RBP14.25□□□□□ -0.13
CPNE6-204ENST00000557829 GGPS1O95749 300 aa14.25□□□□□ -0.13
CPNE6-204ENST00000557829 TNFAIP3P21580 790 aa14.25□□□□□ -0.13
CPNE6-204ENST00000557829 ZNF131P52739 623 aa14.25□□□□□ -0.13
CPNE6-204ENST00000557829 MAGOHP61326 146 aaKnown RBP14.25□□□□□ -0.13
CPNE6-204ENST00000557829 DR1Q01658 176 aa14.25□□□□□ -0.13
CPNE6-204ENST00000557829 SPP2Q13103 211 aa14.25□□□□□ -0.13
CPNE6-204ENST00000557829 MTMR2Q13614 643 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms