RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 RTN4RL1Q86UN2 441 aaPredicted RBP4.45□□□□□ -1.7
TDP1-217ENST00000557782 CILP2Q8IUL8 1156 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 TRIM48Q8IWZ4 208 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 TXLNBQ8N3L3 684 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 GALNT15Q8N3T1 639 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 FAM26EQ8N5C1 309 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 LZTR1Q8N653 840 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 RNF152Q8N8N0 203 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 ATG16L2Q8NAA4 619 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 PLBD2Q8NHP8 589 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 SYTL4Q96C24 671 aaPredicted RBP4.45□□□□□ -1.7
TDP1-217ENST00000557782 FOXRED1Q96CU9 486 aaPredicted RBP4.45□□□□□ -1.7
TDP1-217ENST00000557782 SUCLG2Q96I99 432 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 PAWRQ96IZ0 340 aaKnown RBP4.45□□□□□ -1.7
TDP1-217ENST00000557782 TBC1D32Q96NH3 1257 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 SERINC2Q96SA4 455 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 FOXB1Q99853 325 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 C7orf25Q9BPX7 421 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 STK33Q9BYT3 514 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 MAGEH1Q9H213 219 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 PRDM12Q9H4Q4 367 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 WASH6PQ9NQA3 447 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 TBC1D22BQ9NU19 505 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 LMBRD1Q9NUN5 540 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 BLOC1S4Q9NUP1 217 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 MYOTQ9UBF9 498 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 GRHPRQ9UBQ7 328 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.45□□□□□ -1.7
TDP1-217ENST00000557782 SLC13A4Q9UKG4 626 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 NOL7Q9UMY1 257 aaKnown RBP4.45□□□□□ -1.7
TDP1-217ENST00000557782 SIK3Q9Y2K2 1263 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 A0A1W2PPC4 97 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 A0A1W2PQ27 194 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 A0A1W2PQ64 194 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 A0A1W2PQC6 194 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 A0A1W2PQD8 194 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 PRAMEF22A3QJZ6 481 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 A6NCN8 305 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 H3BS24 57 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 SYT5O00445 386 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 TERTO14746 1132 aaKnown RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 HNRNPDLO14979 420 aaKnown RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 ANP32CO43423 234 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 ORC4O43929 436 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 PLA2G6O60733 806 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 PCDH8O95206 1070 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 VEGFAP15692 232 aaPredicted RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 XPAP23025 273 aaPredicted RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 EEF1GP26641 437 aaKnown RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 POLD1P28340 1107 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 SLC6A11P48066 632 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 CLCN7P51798 805 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 NAP1L1P55209 391 aaKnown RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 NKX6-1P78426 367 aaPredicted RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 FMO1Q01740 532 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 SLC6A3Q01959 620 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 NRG1Q02297 640 aaPredicted RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 CYP27A1Q02318 531 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 TEKQ02763 1124 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 EGR3Q06889 387 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 FOXO1Q12778 655 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 TAF5Q15542 800 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 CCDC178Q5BJE1 867 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 GJC2Q5T442 439 aaPredicted RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 PRAMEF18Q5VWM3 479 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 SHISA2Q6UWI4 295 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 DSTYKQ6XUX3 929 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 TMPRSS7Q7RTY8 843 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 KANSL1Q7Z3B3 1105 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 CABP7Q86V35 215 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 CREG2Q8IUH2 290 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 FAM20CQ8IXL6 584 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 FANCBQ8NB91 859 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 TMEM52Q8NDY8 209 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 NLGN2Q8NFZ4 835 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 UBE2FQ969M7 185 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 MUL1Q969V5 352 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 DDX11Q96FC9 970 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 UBL7Q96S82 380 aaPredicted RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 EIF2AQ9BY44 585 aaKnown RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 CNTD2Q9H8S5 307 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 EPB41L4AQ9HCS5 686 aaPredicted RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 ALG13Q9NP73 1137 aaKnown RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 SARS2Q9NP81 518 aaKnown RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 UBN1Q9NPG3 1134 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 SERHLQ9NQF3 203 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 IFT80Q9P2H3 777 aaPredicted RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 ASH2LQ9UBL3 628 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 TNFRSF10DQ9UBN6 386 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 FEZ2Q9UHY8 353 aaPredicted RBP4.44□□□□□ -1.7
TDP1-217ENST00000557782 DENND2AQ9ULE3 1009 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 USP18Q9UMW8 372 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 TTLL3Q9Y4R7 772 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 PCDHB6Q9Y5E3 794 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 PCDHB4Q9Y5E5 795 aa4.44□□□□□ -1.7
TDP1-217ENST00000557782 A0A1W2PQ45 241 aaPredicted RBP4.43□□□□□ -1.7
TDP1-217ENST00000557782 A0A1W2PQY0 241 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 ANKRD18BA2A2Z9 1011 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 WASH4PA8MWX3 477 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 MYO1FO00160 1098 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms