RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 ATP2B1P20020 1258 aa18.54■□□□□ 0.56
NEK9-211ENST00000557673 SFPQP23246 707 aaKnown RBP eCLIP18.54■□□□□ 0.56
NEK9-211ENST00000557673 TOB1P50616 345 aaPredicted RBP18.54■□□□□ 0.56
NEK9-211ENST00000557673 POLGP54098 1239 aaPredicted RBP18.54■□□□□ 0.56
NEK9-211ENST00000557673 NBR1Q14596 966 aa18.54■□□□□ 0.56
NEK9-211ENST00000557673 MTERF2Q49AM1 385 aa18.54■□□□□ 0.56
NEK9-211ENST00000557673 ATAT1Q5SQI0 421 aa18.54■□□□□ 0.56
NEK9-211ENST00000557673 PLCD3Q8N3E9 789 aa18.54■□□□□ 0.56
NEK9-211ENST00000557673 SNX27Q96L92 541 aa18.54■□□□□ 0.56
NEK9-211ENST00000557673 SH2D3AQ9BRG2 576 aa18.54■□□□□ 0.56
NEK9-211ENST00000557673 TRAIPQ9BWF2 469 aa18.54■□□□□ 0.56
NEK9-211ENST00000557673 POMKQ9H5K3 350 aa18.54■□□□□ 0.56
NEK9-211ENST00000557673 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.53■□□□□ 0.56
NEK9-211ENST00000557673 C2CD4DB7Z1M9 353 aa18.53■□□□□ 0.56
NEK9-211ENST00000557673 GALR2O43603 387 aaPredicted RBP18.53■□□□□ 0.56
NEK9-211ENST00000557673 MARCH6O60337 910 aa18.53■□□□□ 0.56
NEK9-211ENST00000557673 MCM7P33993 719 aa18.53■□□□□ 0.56
NEK9-211ENST00000557673 TARBP2Q15633 366 aaKnown RBP18.53■□□□□ 0.56
NEK9-211ENST00000557673 RILPL1Q5EBL4 403 aa18.53■□□□□ 0.56
NEK9-211ENST00000557673 XKR3Q5GH77 459 aa18.53■□□□□ 0.56
NEK9-211ENST00000557673 GLB1LQ6UWU2 654 aa18.53■□□□□ 0.56
NEK9-211ENST00000557673 VPS52Q8N1B4 723 aa18.53■□□□□ 0.56
NEK9-211ENST00000557673 TDRD5Q8NAT2 981 aaKnown RBP18.53■□□□□ 0.56
NEK9-211ENST00000557673 ZNF668Q96K58 619 aaPredicted RBP18.53■□□□□ 0.56
NEK9-211ENST00000557673 NIFKQ9BYG3 293 aaKnown RBP18.53■□□□□ 0.56
NEK9-211ENST00000557673 USTQ9Y2C2 406 aa18.53■□□□□ 0.56
NEK9-211ENST00000557673 IRAK3Q9Y616 596 aa18.53■□□□□ 0.56
NEK9-211ENST00000557673 ZFHX2Q9C0A1 2572 aaPredicted RBP18.53■□□□□ 0.56
NEK9-211ENST00000557673 ARID2Q68CP9 1835 aa18.53■□□□□ 0.56
NEK9-211ENST00000557673 USP34Q70CQ2 3546 aa18.53■□□□□ 0.56
NEK9-211ENST00000557673 KMT2EQ8IZD2 1858 aa18.52■□□□□ 0.56
NEK9-211ENST00000557673 ZC3H11AO75152 810 aaKnown RBP eCLIP18.52■□□□□ 0.56
NEK9-211ENST00000557673 FGFR4P22455 802 aa18.52■□□□□ 0.56
NEK9-211ENST00000557673 ANP32AP39687 249 aaKnown RBP18.52■□□□□ 0.56
NEK9-211ENST00000557673 PHKA2P46019 1235 aa18.52■□□□□ 0.56
NEK9-211ENST00000557673 PSMC5P62195 406 aa18.52■□□□□ 0.56
NEK9-211ENST00000557673 DRP2Q13474 957 aa18.52■□□□□ 0.56
NEK9-211ENST00000557673 CALCRLQ16602 461 aa18.52■□□□□ 0.56
NEK9-211ENST00000557673 TWF2Q6IBS0 349 aaKnown RBP18.52■□□□□ 0.56
NEK9-211ENST00000557673 KIAA1841Q6NSI8 718 aa18.52■□□□□ 0.56
NEK9-211ENST00000557673 DDX53Q86TM3 631 aaKnown RBP18.52■□□□□ 0.56
NEK9-211ENST00000557673 PPFIBP1Q86W92 1011 aa18.52■□□□□ 0.56
NEK9-211ENST00000557673 ZDHHC14Q8IZN3 488 aa18.52■□□□□ 0.56
NEK9-211ENST00000557673 CEP89Q96ST8 783 aa18.52■□□□□ 0.56
NEK9-211ENST00000557673 TMEM60Q9H2L4 133 aa18.52■□□□□ 0.56
NEK9-211ENST00000557673 FAM86C1Q9NVL1 165 aa18.52■□□□□ 0.56
NEK9-211ENST00000557673 DBR1Q9UK59 544 aaKnown RBP18.52■□□□□ 0.56
NEK9-211ENST00000557673 PCDHB6Q9Y5E3 794 aa18.52■□□□□ 0.56
NEK9-211ENST00000557673 DDX11L8A8MPP1 907 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 NT5C1B-RDH14C9J2C7 533 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 H0Y858 1186 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 BRD1O95696 1058 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 CTSAP10619 480 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 PDIA4P13667 645 aaKnown RBP18.51■□□□□ 0.55
NEK9-211ENST00000557673 RAB27AP51159 221 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 RNASELQ05823 741 aaKnown RBP18.51■□□□□ 0.55
NEK9-211ENST00000557673 SPIRE1Q08AE8 756 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 PKP1Q13835 747 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 RARS2Q5T160 578 aaKnown RBP18.51■□□□□ 0.55
NEK9-211ENST00000557673 PLA2G4FQ68DD2 849 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 NCAPH2Q6IBW4 605 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 ANO5Q75V66 913 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 ZNF410Q86VK4 478 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 SLFN12Q8IYM2 578 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 MTMR9Q96QG7 549 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 JPH2Q9BR39 696 aaPredicted RBP18.51■□□□□ 0.55
NEK9-211ENST00000557673 ZBP1Q9H171 429 aa18.51■□□□□ 0.55
NEK9-211ENST00000557673 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.51■□□□□ 0.55
NEK9-211ENST00000557673 WRAP73Q9P2S5 460 aaPredicted RBP18.51■□□□□ 0.55
NEK9-211ENST00000557673 PROB1E7EW31 1015 aa18.5■□□□□ 0.55
NEK9-211ENST00000557673 CSDE1O75534 798 aaKnown RBP18.5■□□□□ 0.55
NEK9-211ENST00000557673 PDGFBP01127 241 aaPredicted RBP18.5■□□□□ 0.55
NEK9-211ENST00000557673 OR52Z1P0C646 297 aa18.5■□□□□ 0.55
NEK9-211ENST00000557673 QARSP47897 775 aaKnown RBP18.5■□□□□ 0.55
NEK9-211ENST00000557673 ZNF174Q15697 407 aa18.5■□□□□ 0.55
NEK9-211ENST00000557673 NOMO2Q5JPE7 1267 aa18.5■□□□□ 0.55
NEK9-211ENST00000557673 CABP7Q86V35 215 aa18.5■□□□□ 0.55
NEK9-211ENST00000557673 ACSF2Q96CM8 615 aaPredicted RBP18.5■□□□□ 0.55
NEK9-211ENST00000557673 PGBD4Q96DM1 585 aa18.5■□□□□ 0.55
NEK9-211ENST00000557673 IGSF21Q96ID5 467 aa18.5■□□□□ 0.55
NEK9-211ENST00000557673 MFSD1Q9H3U5 465 aa18.5■□□□□ 0.55
NEK9-211ENST00000557673 PIN4Q9Y237 131 aaKnown RBP18.5■□□□□ 0.55
NEK9-211ENST00000557673 A0A087WZ62 844 aa18.49■□□□□ 0.55
NEK9-211ENST00000557673 IGKV6-21A0A0C4DH24 114 aa18.49■□□□□ 0.55
NEK9-211ENST00000557673 ZNF623O75123 536 aa18.49■□□□□ 0.55
NEK9-211ENST00000557673 BAG4O95429 457 aaKnown RBP18.49■□□□□ 0.55
NEK9-211ENST00000557673 P4HBP07237 508 aaKnown RBP18.49■□□□□ 0.55
NEK9-211ENST00000557673 ZSCAN22P10073 491 aaPredicted RBP18.49■□□□□ 0.55
NEK9-211ENST00000557673 EPHA7Q15375 998 aa18.49■□□□□ 0.55
NEK9-211ENST00000557673 ASTLQ6HA08 431 aaPredicted RBP18.49■□□□□ 0.55
NEK9-211ENST00000557673 FDXACB1Q9BRP7 624 aaPredicted RBP18.49■□□□□ 0.55
NEK9-211ENST00000557673 LXNQ9BS40 222 aa18.49■□□□□ 0.55
NEK9-211ENST00000557673 ZSCAN16Q9H4T2 348 aaPredicted RBP18.49■□□□□ 0.55
NEK9-211ENST00000557673 CYP26B1Q9NR63 512 aa18.49■□□□□ 0.55
NEK9-211ENST00000557673 RGL1Q9NZL6 768 aa18.49■□□□□ 0.55
NEK9-211ENST00000557673 SUCLA2Q9P2R7 463 aaPredicted RBP18.49■□□□□ 0.55
NEK9-211ENST00000557673 LIMD1Q9UGP4 676 aa18.49■□□□□ 0.55
NEK9-211ENST00000557673 CDH22Q9UJ99 828 aa18.49■□□□□ 0.55
NEK9-211ENST00000557673 SPDYE4A6NLX3 237 aa18.48■□□□□ 0.55
NEK9-211ENST00000557673 GALTP07902 379 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms