RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 TBC1D16Q8TBP0 767 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 DYDC1Q8WWB3 177 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 KRT35Q92764 455 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 SEL1LQ9UBV2 794 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 POLLQ9UGP5 575 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 CCNL1Q9UK58 526 aaPredicted RBP12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 AHDC1Q5TGY3 1603 aaPredicted RBP12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 PASKQ96RG2 1323 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 FAM170AA1A519 330 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 C6orf229H3BNL8 230 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 FOXN3O00409 490 aaPredicted RBP12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 EML1O00423 815 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 SNX3O60493 162 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 LRRN2O75325 713 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 FTLP02792 175 aaPredicted RBP12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 GPC5P78333 572 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 C1orf186Q6ZWK4 172 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 CYFIP1Q7L576 1253 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 AMIGO3Q86WK7 504 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 CCDC105Q8IYK2 499 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 MORC4Q8TE76 937 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 PIGOQ8TEQ8 1089 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 ART4Q93070 314 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 VTI1AQ96AJ9 217 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 HOOK2Q96ED9 719 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 RBM17Q96I25 401 aaKnown RBP12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 RSRC1Q96IZ7 334 aaKnown RBP12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 MTFR1LQ9H019 292 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 AGPAT3Q9NRZ7 376 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 ABCF3Q9NUQ8 709 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 DMAC2Q9NW81 257 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 SUGT1Q9Y2Z0 365 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 PCDHA3Q9Y5H8 950 aa12.73□□□□□ -0.37
VIPAS39-211ENST00000557658 MARCKSL1P49006 195 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 PHLDB3Q6NSJ2 640 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 FBXO11Q86XK2 927 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 MKL1Q969V6 931 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 WNT8AQ9H1J5 351 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 TUFT1Q9NNX1 390 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 DBR1Q9UK59 544 aaKnown RBP12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 USP15Q9Y4E8 981 aaPredicted RBP12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 EEF2P13639 858 aaKnown RBP12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 COMTP21964 271 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 POLD1P28340 1107 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 COILP38432 576 aaPredicted RBP12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 PEX5P50542 639 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 BFSP1Q12934 665 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 CALCOCO2Q13137 446 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 MESDQ14696 234 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 CYP1B1Q16678 543 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 UBAP2Q5T6F2 1119 aaKnown RBP12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 PRR5LQ6MZQ0 368 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 TRMT10CQ7L0Y3 403 aaKnown RBP12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 PTF1AQ7RTS3 328 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 ZNF720Q7Z2F6 126 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 FAM178BQ8IXR5 827 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 GBP7Q8N8V2 638 aaPredicted RBP12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 CERKQ8TCT0 537 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 SLC20A1Q8WUM9 679 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 CD2APQ9Y5K6 639 aa12.72□□□□□ -0.37
VIPAS39-211ENST00000557658 EXOC3O60645 756 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 BBOX1O75936 387 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 SUN1O94901 812 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 UBOX5O94941 541 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 OAS1P00973 400 aaKnown RBP12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 NQO1P15559 274 aaKnown RBP12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 SCP2P22307 547 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 ZNF131P52739 623 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 ZNF268Q14587 947 aaPredicted RBP12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 USH1GQ495M9 461 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 CRY2Q49AN0 593 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 TRAPPC3LQ5T215 181 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 EXOC3L1Q86VI1 746 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 CCDC25Q86WR0 208 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 KSR1Q8IVT5 923 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 TEX2Q8IWB9 1127 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 TPH2Q8IWU9 490 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 ZDHHC14Q8IZN3 488 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 HSD17B14Q9BPX1 270 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 EBF2Q9HAK2 575 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 NYAP2Q9P242 653 aa12.71□□□□□ -0.37
VIPAS39-211ENST00000557658 MYH11P35749 1972 aa12.71□□□□□ -0.38
VIPAS39-211ENST00000557658 RTN2O75298 545 aa12.71□□□□□ -0.38
VIPAS39-211ENST00000557658 RPSAP08865 295 aaKnown RBP12.71□□□□□ -0.38
VIPAS39-211ENST00000557658 ATP5DP30049 168 aa12.71□□□□□ -0.38
VIPAS39-211ENST00000557658 CETN1Q12798 172 aa12.71□□□□□ -0.38
VIPAS39-211ENST00000557658 CCDC38Q502W7 563 aa12.71□□□□□ -0.38
VIPAS39-211ENST00000557658 SLC13A5Q86YT5 568 aaPredicted RBP12.71□□□□□ -0.38
VIPAS39-211ENST00000557658 CYP2W1Q8TAV3 490 aa12.71□□□□□ -0.38
VIPAS39-211ENST00000557658 PLCD4Q9BRC7 762 aa12.71□□□□□ -0.38
VIPAS39-211ENST00000557658 UBE2TQ9NPD8 197 aaPredicted RBP12.71□□□□□ -0.38
VIPAS39-211ENST00000557658 AGAP1Q9UPQ3 857 aa12.71□□□□□ -0.38
VIPAS39-211ENST00000557658 PTPN22Q9Y2R2 807 aa12.71□□□□□ -0.38
VIPAS39-211ENST00000557658 UBAP1LF5GYI3 381 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 CYP3A4P08684 503 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 RARAP10276 462 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 SLC8A3P57103 927 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 SNAP25P60880 206 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 NCALDP61601 193 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 FAM98CQ17RN3 349 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms