RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 C17orf80Q9BSJ5 609 aa8.67□□□□□ -1.02
PSEN1-222ENST00000557356 FZD8Q9H461 694 aa8.67□□□□□ -1.02
PSEN1-222ENST00000557356 TMEM134Q9H6X4 195 aa8.67□□□□□ -1.02
PSEN1-222ENST00000557356 KMT5AQ9NQR1 393 aa8.67□□□□□ -1.02
PSEN1-222ENST00000557356 MTUS1Q9ULD2 1270 aa8.67□□□□□ -1.02
PSEN1-222ENST00000557356 COG5Q9UP83 839 aa8.67□□□□□ -1.02
PSEN1-222ENST00000557356 LZTS1Q9Y250 596 aa8.67□□□□□ -1.02
PSEN1-222ENST00000557356 GIT1Q9Y2X7 761 aa8.67□□□□□ -1.02
PSEN1-222ENST00000557356 PCDHB2Q9Y5E7 798 aa8.67□□□□□ -1.02
PSEN1-222ENST00000557356 CLIC4Q9Y696 253 aa8.67□□□□□ -1.02
PSEN1-222ENST00000557356 TTC3P53804 2025 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 PP2D1A8MPX8 630 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 ACKR2O00590 384 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 TSPAN1O60635 241 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 CUTAO60888 179 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 HIP1RO75146 1068 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 F13A1P00488 732 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 KRT18P05783 430 aaKnown RBP8.66□□□□□ -1.02
PSEN1-222ENST00000557356 FGFR1P11362 822 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 PLS3P13797 630 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 IBSPP21815 317 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-222ENST00000557356 MARCKSP29966 332 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-222ENST00000557356 AMPD3Q01432 767 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 CEBPZQ03701 1054 aaKnown RBP8.66□□□□□ -1.02
PSEN1-222ENST00000557356 STRN3Q13033 797 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 PRPF4BQ13523 1007 aaKnown RBP8.66□□□□□ -1.02
PSEN1-222ENST00000557356 ADGRE1Q14246 886 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 PAN2Q504Q3 1202 aaKnown RBP8.66□□□□□ -1.02
PSEN1-222ENST00000557356 NOMO2Q5JPE7 1267 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 THNSL1Q8IYQ7 743 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 LINC00301Q8NCQ3 95 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 ATXN2LQ8WWM7 1075 aaKnown RBP8.66□□□□□ -1.02
PSEN1-222ENST00000557356 SYMPKQ92797 1274 aaKnown RBP8.66□□□□□ -1.02
PSEN1-222ENST00000557356 CASD1Q96PB1 797 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 CUEDC2Q9H467 287 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 MINDY3Q9H8M7 445 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 RSAD1Q9HA92 442 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 GPRC5CQ9NQ84 441 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 TYW1Q9NV66 732 aaKnown RBP8.66□□□□□ -1.02
PSEN1-222ENST00000557356 SPG21Q9NZD8 308 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 PLAGL2Q9UPG8 496 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 MRPL42Q9Y6G3 142 aaKnown RBP8.66□□□□□ -1.02
PSEN1-222ENST00000557356 MICAL3Q7RTP6 2002 aa8.66□□□□□ -1.02
PSEN1-222ENST00000557356 ZMYM2Q9UBW7 1377 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 WDR81Q562E7 1941 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 RFXAPO00287 272 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 LPXNO60711 386 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 TBCAO75347 108 aaKnown RBP8.65□□□□□ -1.02
PSEN1-222ENST00000557356 OFD1O75665 1012 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 ALDH2P05091 517 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 PRKCBP05771 671 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 ARF4P18085 180 aaPredicted RBP8.65□□□□□ -1.02
PSEN1-222ENST00000557356 NPTX2P47972 431 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 SLC12A3P55017 1021 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 PEX3P56589 373 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 PLCB3Q01970 1234 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 SKIV2LQ15477 1246 aaKnown RBP8.65□□□□□ -1.02
PSEN1-222ENST00000557356 KYAT1Q16773 422 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 DCAF4L1Q3SXM0 396 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 SV2BQ7L1I2 683 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 GDPD5Q8WTR4 605 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 LARP4BQ92615 738 aaKnown RBP8.65□□□□□ -1.02
PSEN1-222ENST00000557356 RAD54LQ92698 747 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 PNMA5Q96PV4 448 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 USP28Q96RU2 1077 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 PLIN2Q99541 437 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 MRPL4Q9BYD3 311 aaKnown RBP8.65□□□□□ -1.02
PSEN1-222ENST00000557356 NSUN3Q9H649 340 aaKnown RBP8.65□□□□□ -1.02
PSEN1-222ENST00000557356 TFIP11Q9UBB9 837 aaKnown RBP8.65□□□□□ -1.02
PSEN1-222ENST00000557356 SEL1LQ9UBV2 794 aa8.65□□□□□ -1.02
PSEN1-222ENST00000557356 FBXO2Q9UK22 296 aaPredicted RBP8.65□□□□□ -1.02
PSEN1-222ENST00000557356 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.65□□□□□ -1.02
PSEN1-222ENST00000557356 INPPL1O15357 1258 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 FGF18O76093 207 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 FAM13AO94988 1023 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 ARHGEF15O94989 841 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 ATF7P17544 494 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-222ENST00000557356 PLCG1P19174 1290 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 STAT6P42226 847 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 KRT85P78386 507 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 NUCB2P80303 420 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 MRPS5P82675 430 aaKnown RBP8.64□□□□□ -1.03
PSEN1-222ENST00000557356 GIT2Q14161 759 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 KARSQ15046 597 aaKnown RBP8.64□□□□□ -1.03
PSEN1-222ENST00000557356 CCDC85BQ15834 202 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-222ENST00000557356 AMHR2Q16671 573 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 PUS10Q3MIT2 529 aaKnown RBP8.64□□□□□ -1.03
PSEN1-222ENST00000557356 CLLU1OSQ5K130 101 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 UBXN11Q5T124 520 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 ATF7IP2Q5U623 682 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 FAM173BQ6P4H8 233 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 KCNT2Q6UVM3 1135 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 GPBP1Q86WP2 473 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.64□□□□□ -1.03
PSEN1-222ENST00000557356 MICALL1Q8N3F8 863 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 IQUBQ8NA54 791 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 KLHL23Q8NBE8 558 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 COLGALT1Q8NBJ5 622 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 SPRYD3Q8NCJ5 442 aa8.64□□□□□ -1.03
PSEN1-222ENST00000557356 SPPL3Q8TCT6 385 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms