RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	CACNA1F	O60840	1977 aa		5.71	□□□□□ -1.5
SCFD1-223	ENST00000557076	MYO15A	Q9UKN7	3530 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	VWA5A	O00534	786 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	NCK2	O43639	380 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	ZEB2	O60315	1214 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	UQCRFS1P1	P0C7P4	283 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	PDIA4	P13667	645 aa	Known RBP	5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	SHMT1	P34896	483 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	ETV3	P41162	512 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	ERVK-21	P61565	698 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	TNK2	Q07912	1038 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	GORAB	Q5T7V8	394 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	TMED8	Q6PL24	325 aa	Predicted RBP	5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	ADGRA1	Q86SQ6	560 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	MRPL41	Q8IXM3	137 aa	Known RBP	5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	DDX11	Q96FC9	970 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	SCLY	Q96I15	445 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	NEUROD6	Q96NK8	337 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	RAD9A	Q99638	391 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	KRTAP4-2	Q9BYR5	136 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	ALG13	Q9NP73	1137 aa	Known RBP	5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	CTNNA3	Q9UI47	895 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	ZHX1	Q9UKY1	873 aa	Predicted RBP	5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	PA2G4	Q9UQ80	394 aa	Known RBP	5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	TMX2	Q9Y320	296 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076		Q9Y3F1	56 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	ZNF536	O15090	1300 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	PTPRC	P08575	1304 aa		5.7	□□□□□ -1.5
SCFD1-223	ENST00000557076	FRMPD3	Q5JV73	1810 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	DOCK2	Q92608	1830 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	TECTA	O75443	2155 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	ADCY6	O43306	1168 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	BAIAP3	O94812	1187 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	IQCF3	P0C7M6	154 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	MED14OS	P0DP75	135 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	GLDC	P23378	1020 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	MCAM	P43121	646 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	PLCD1	P51178	756 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	GABPA	Q06546	454 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	TFCP2	Q12800	502 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	FSCN1	Q16658	493 aa	Known RBP	5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	CXCL17	Q6UXB2	119 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	DEFB128	Q7Z7B8	93 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	REPS2	Q8NFH8	660 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	TGS1	Q96RS0	853 aa	Known RBP	5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	VCPKMT	Q9H867	229 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	PRKRIP1	Q9H875	184 aa	Predicted RBP	5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	ZNF214	Q9UL59	606 aa	Predicted RBP	5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	EP300	Q09472	2414 aa	Predicted RBP	5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	CFAP47	Q6ZTR5	3102 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	TNKS	O95271	1327 aa		5.69	□□□□□ -1.5
SCFD1-223	ENST00000557076	GVINP1	Q7Z2Y8	2422 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	LCHN	A4D1U4	455 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	TCAF2	A6NFQ2	919 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	KRTAP9-7	A8MTY7	169 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	NPIPB6	E9PJ23	425 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	ATP2A1	O14983	1001 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	WDR46	O15213	610 aa	Known RBP	5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	HPX	P02790	462 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	ESR1	P03372	595 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	PGR	P06401	933 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	UBTFL1	P0CB47	393 aa	Predicted RBP	5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	CYP2C9	P11712	490 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	EIF4B	P23588	611 aa	Known RBP	5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	ID4	P47928	161 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	BEX3	Q00994	111 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	TNFAIP2	Q03169	654 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	PDE4B	Q07343	736 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	DDX10	Q13206	875 aa	Known RBP	5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	PTPRO	Q16827	1216 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	SLC6A19	Q695T7	634 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	IQSEC1	Q6DN90	963 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	LILRA6	Q6PI73	481 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	TMEM179	Q6ZVK1	233 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	CDH24	Q86UP0	819 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	SPICE1	Q8N0Z3	855 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	GDPD5	Q8WTR4	605 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	ATOH1	Q92858	354 aa	Predicted RBP	5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	PABPC5	Q96DU9	382 aa	Known RBP	5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	ZNF512B	Q96KM6	892 aa	Predicted RBP	5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	TEX13B	Q9BXU2	312 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	FTO	Q9C0B1	505 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	KATNBL1	Q9H079	304 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	AP5M1	Q9H0R1	490 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	TRIT1	Q9H3H1	467 aa	Known RBP	5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	SH2D4A	Q9H788	454 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	DMD	P11532	3685 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	ASTN1	O14525	1302 aa		5.68	□□□□□ -1.5
SCFD1-223	ENST00000557076	ZNF236	Q9UL36	1845 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	TMEM221	A6NGB7	291 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076		H3BQ06	376 aa	Predicted RBP	5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076		M0R296	226 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	GFRA2	O00451	464 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	MPHOSPH10	O00566	681 aa	Known RBP	5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	GJB5	O95377	273 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	PARN	O95453	639 aa	Known RBP	5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	SRF	P11831	508 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	GNA15	P30679	374 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	CDK8	P49336	464 aa		5.67	□□□□□ -1.5

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