RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 SEL1LQ9UBV2 794 aa16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 SMCHD1A6NHR9 2005 aa16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 PSMC5P62195 406 aa16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 IGBP1P78318 339 aa16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 KAZNQ674X7 775 aa16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 SYN2Q92777 582 aaPredicted RBP16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 AGPAT1Q99943 283 aa16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.55■□□□□ 0.243e-6■□□□□ 9.1
TMEM55B-207ENST00000557041 RANBP17Q9H2T7 1088 aaKnown RBP16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 ZNF408Q9H9D4 720 aa16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 LIG3P49916 1009 aa16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 BTNL9Q6UXG8 535 aa16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 GSTA5Q7RTV2 222 aa16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 MRIQ9BWK5 157 aa16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 RRP15Q9Y3B9 282 aaKnown RBP16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 DAAM1Q9Y4D1 1078 aa16.55■□□□□ 0.24
TMEM55B-207ENST00000557041 SLC16A3O15427 465 aaKnown RBP16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 PLS3P13797 630 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 PPP2R5CQ13362 524 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 USP37Q86T82 979 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 SLC47A2Q86VL8 602 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 RFFLQ8WZ73 363 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 PBKQ96KB5 322 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 RIT2Q99578 217 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 ODF2LQ9ULJ1 636 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 WDR46O15213 610 aaKnown RBP16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 KRT19P08727 400 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 MRPS9P82933 396 aaKnown RBP16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 ASTE1Q2TB18 679 aaPredicted RBP16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 LNX1Q8TBB1 728 aaPredicted RBP16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 MGARPQ8TDB4 240 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 C1orf112Q9NSG2 853 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 TBC1D22BQ9NU19 505 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 FBXL5Q9UKA1 691 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 NOVA2Q9UNW9 492 aaKnown RBP16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 PCDHA10Q9Y5I2 948 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 ALG6Q9Y672 507 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 NAV1Q8NEY1 1877 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 TMOD1P28289 359 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 CPA5Q8WXQ8 436 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 LRRC45Q96CN5 670 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 PDCD2LQ9BRP1 358 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 RNF14Q9UBS8 474 aa16.54■□□□□ 0.24
TMEM55B-207ENST00000557041 ANKRD63C9JTQ0 380 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 PJA2O43164 708 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 CYP3A4P08684 503 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 MFAP3P55082 362 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 SCARA5Q6ZMJ2 495 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 TAS1R2Q8TE23 839 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 ATP6V0A1Q93050 837 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 AGO4Q9HCK5 861 aaKnown RBP16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 EIF3DO15371 548 aaKnown RBP eCLIP16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 MMEP08473 750 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 CCND2P30279 289 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 PIK3CAP42336 1068 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 NPTX2P47972 431 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 DR1Q01658 176 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 C10orf76Q5T2E6 689 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 DCAF15Q66K64 600 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 KIFAP3Q92845 792 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 TAF1DQ9H5J8 278 aaPredicted RBP16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 LCMT1Q9UIC8 334 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 MKRN3Q13064 507 aaKnown RBP16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 GNPTABQ3T906 1256 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 DAB2IPQ5VWQ8 1189 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 NUP85Q9BW27 656 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 ANAPC7Q9UJX3 599 aa16.53■□□□□ 0.24
TMEM55B-207ENST00000557041 GOLGA8KD6RF30 607 aa16.52■□□□□ 0.24
TMEM55B-207ENST00000557041 PIK3CDO00329 1044 aa16.52■□□□□ 0.24
TMEM55B-207ENST00000557041 NOP56O00567 594 aaKnown RBP16.52■□□□□ 0.24
TMEM55B-207ENST00000557041 CD19P15391 556 aa16.52■□□□□ 0.24
TMEM55B-207ENST00000557041 SEC24CP53992 1094 aa16.52■□□□□ 0.24
TMEM55B-207ENST00000557041 ERVK-9P63128 1117 aa16.52■□□□□ 0.24
TMEM55B-207ENST00000557041 SPOPLQ6IQ16 392 aa16.52■□□□□ 0.24
TMEM55B-207ENST00000557041 C1orf54Q8WWF1 131 aa16.52■□□□□ 0.24
TMEM55B-207ENST00000557041 IMPG2Q9BZV3 1241 aa16.52■□□□□ 0.24
TMEM55B-207ENST00000557041 FAM53CQ9NYF3 392 aa16.52■□□□□ 0.24
TMEM55B-207ENST00000557041 RASAL2Q9UJF2 1139 aa16.52■□□□□ 0.24
TMEM55B-207ENST00000557041 MTUS1Q9ULD2 1270 aa16.52■□□□□ 0.24
TMEM55B-207ENST00000557041 NRAPQ86VF7 1730 aa16.52■□□□□ 0.24
TMEM55B-207ENST00000557041 IGSF9BQ9UPX0 1349 aa16.52■□□□□ 0.24
TMEM55B-207ENST00000557041 COL22A1Q8NFW1 1626 aaPredicted RBP16.52■□□□□ 0.23
TMEM55B-207ENST00000557041 POTEJP0CG39 1038 aa16.52■□□□□ 0.23
TMEM55B-207ENST00000557041 IFNAR2P48551 515 aa16.52■□□□□ 0.23
TMEM55B-207ENST00000557041 PGM5Q15124 567 aa16.52■□□□□ 0.23
TMEM55B-207ENST00000557041 DAW1Q8N136 415 aa16.52■□□□□ 0.23
TMEM55B-207ENST00000557041 TATDN2Q93075 761 aa16.52■□□□□ 0.23
TMEM55B-207ENST00000557041 PAIP2Q9BPZ3 127 aaKnown RBP16.52■□□□□ 0.23
TMEM55B-207ENST00000557041 KLHL11Q9NVR0 708 aa16.52■□□□□ 0.23
TMEM55B-207ENST00000557041 GGA3Q9NZ52 723 aa16.52■□□□□ 0.23
TMEM55B-207ENST00000557041 CNOT8Q9UFF9 292 aaKnown RBP16.52■□□□□ 0.23
TMEM55B-207ENST00000557041 NR2E1Q9Y466 385 aa16.52■□□□□ 0.23
TMEM55B-207ENST00000557041 K7ERI5 159 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 NR1D1P20393 614 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 MARCKSL1P49006 195 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 NSUN6Q8TEA1 469 aaKnown RBP16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 IWS1Q96ST2 819 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 POLR3FQ9H1D9 316 aaPredicted RBP16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 PCDHB4Q9Y5E5 795 aa16.51■□□□□ 0.23
TMEM55B-207ENST00000557041 FRMPD4Q14CM0 1322 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms