RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 RUBCNQ92622 972 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 BPIFA3Q9BQP9 254 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 PRDM5Q9NQX1 630 aaPredicted RBP12.74□□□□□ -0.37
NEK9-210ENST00000557026 DSEQ9UL01 958 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 RPS6KA5O75582 802 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 HMGCS2P54868 508 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 R3HDM1Q15032 1099 aaKnown RBP12.74□□□□□ -0.37
NEK9-210ENST00000557026 UGP2Q16851 508 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 CDK5RAP1Q96SZ6 601 aaKnown RBP12.74□□□□□ -0.37
NEK9-210ENST00000557026 NDEL1Q9GZM8 345 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 IGKV5-2P06315 115 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 ARHGDIAP52565 204 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 MTFR1Q15390 333 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 MYLK4Q86YV6 388 aaPredicted RBP12.74□□□□□ -0.37
NEK9-210ENST00000557026 KIF12Q96FN5 646 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 FAM129AQ9BZQ8 928 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 MYOZ2Q9NPC6 264 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 TLR7Q9NYK1 1049 aaKnown RBP12.74□□□□□ -0.37
NEK9-210ENST00000557026 DNAJC12Q9UKB3 198 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 DAGLAQ9Y4D2 1042 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 SPHKAPQ2M3C7 1700 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 CHUKO15111 745 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 ZNF543Q08ER8 600 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 SCARF1Q14162 830 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 ADGRF4Q8IZF3 695 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 DYDC2Q96IM9 177 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 FOXP3Q9BZS1 431 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 SLC7A5P2Q9GIP4 190 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 WNT8AQ9H1J5 351 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 KDM4CQ9H3R0 1056 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 PACSIN2Q9UNF0 486 aaPredicted RBP12.74□□□□□ -0.37
NEK9-210ENST00000557026 NR2E3Q9Y5X4 410 aa12.74□□□□□ -0.37
NEK9-210ENST00000557026 BUB1O43683 1085 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 KRT16P08779 473 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 SETSIPP0DME0 302 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 OXCT1P55809 520 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 SGSM1Q2NKQ1 1148 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 MYRIPQ8NFW9 859 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 RASGRP4Q8TDF6 673 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 PYROXD1Q8WU10 500 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 SCFD1Q8WVM8 642 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 LXNQ9BS40 222 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 MTMR4Q9NYA4 1195 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 RBAKQ9NYW8 714 aaPredicted RBP12.73□□□□□ -0.37
NEK9-210ENST00000557026 SYNPO2Q9UMS6 1093 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 USP42Q9H9J4 1324 aaKnown RBP12.73□□□□□ -0.37
NEK9-210ENST00000557026 CAMTA2O94983 1202 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 KIAA1257Q9ULG3 409 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 NRXN1Q9ULB1 1477 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 CDC27P30260 824 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 CASP14P31944 242 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 ETFBP38117 255 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 PPP4CP60510 307 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 PDCD2Q16342 344 aaPredicted RBP12.73□□□□□ -0.37
NEK9-210ENST00000557026 TCP11X2Q5H9J9 407 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 MTHFD1LQ6UB35 978 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 MOXD1Q6UVY6 613 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 TRIM67Q6ZTA4 783 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 PLEKHH3Q7Z736 793 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.73□□□□□ -0.37
NEK9-210ENST00000557026 SEPT8Q92599 483 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 LRRIQ3A6PVS8 624 aaPredicted RBP12.73□□□□□ -0.37
NEK9-210ENST00000557026 CXCL11O14625 94 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 CLGNO14967 610 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 SLC8A1P32418 973 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 OSTNP61366 133 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 FAM182BQ5T319 152 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 PDXDC1Q6P996 788 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 ZNF589Q86UQ0 364 aaPredicted RBP12.73□□□□□ -0.37
NEK9-210ENST00000557026 OSCP1Q8WVF1 389 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 SNX19Q92543 992 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 ULK4Q96C45 1275 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 FRMD8Q9BZ67 464 aaPredicted RBP12.73□□□□□ -0.37
NEK9-210ENST00000557026 INTS9Q9NV88 658 aaKnown RBP12.73□□□□□ -0.37
NEK9-210ENST00000557026 PARVAQ9NVD7 372 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 GGA3Q9NZ52 723 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 CNOT8Q9UFF9 292 aaKnown RBP12.73□□□□□ -0.37
NEK9-210ENST00000557026 TRIM33Q9UPN9 1127 aa12.73□□□□□ -0.37
NEK9-210ENST00000557026 ZNF521Q96K83 1311 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 POTEB3A0JP26 581 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 C6orf222P0C671 652 aaPredicted RBP12.72□□□□□ -0.37
NEK9-210ENST00000557026 RESTQ13127 1097 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 HEATR6Q6AI08 1181 aaKnown RBP12.72□□□□□ -0.37
NEK9-210ENST00000557026 NOTUMQ6P988 496 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 POTEBQ6S5H4 581 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 LRRC8AQ8IWT6 810 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 RHOT1Q8IXI2 618 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 TSPAN17Q96FV3 270 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 CCSER1Q9C0I3 900 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 PNPLA6Q8IY17 1366 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 GRID2IPA4D2P6 1211 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 GNGT2O14610 69 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 MSCO60682 206 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 LUC7L3O95232 432 aaKnown RBP12.72□□□□□ -0.37
NEK9-210ENST00000557026 CSF1RP07333 972 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 RAB27AP51159 221 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 FKBP1AP62942 108 aaKnown RBP12.72□□□□□ -0.37
NEK9-210ENST00000557026 C16orf86Q6ZW13 317 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 SFR1Q86XK3 245 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 ZNF677Q86XU0 584 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms