RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ZNF720Q7Z2F6 126 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 PIGWQ7Z7B1 504 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 PNMA8AQ86V59 439 aaPredicted RBP12.28□□□□□ -0.44
SRP54-213ENST00000556994 ARHGEF19Q8IW93 802 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 FAM178BQ8IXR5 827 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 KIRREL3Q8IZU9 778 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 FIZ1Q96SL8 496 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 HSD17B14Q9BPX1 270 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 POLR3CQ9BUI4 534 aaPredicted RBP12.28□□□□□ -0.44
SRP54-213ENST00000556994 MLXIPLQ9NP71 852 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 WRAP73Q9P2S5 460 aaPredicted RBP12.28□□□□□ -0.44
SRP54-213ENST00000556994 EIF3DO15371 548 aaKnown RBP eCLIP12.28□□□□□ -0.44
SRP54-213ENST00000556994 BBOX1O75936 387 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 ATP6V1G2O95670 118 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 GHRP10912 638 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 CREB1P16220 341 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 ELF1P32519 619 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 C6orf118Q5T5N4 469 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 CCDC105Q8IYK2 499 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 RPUSD2Q8IZ73 545 aaKnown RBP12.28□□□□□ -0.44
SRP54-213ENST00000556994 SYCP3Q8IZU3 236 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 SPICE1Q8N0Z3 855 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 DCAF4Q8WV16 495 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 KAT5Q92993 513 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 WDR18Q9BV38 432 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 KCNQ5Q9NR82 932 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 ABCF3Q9NUQ8 709 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 SAMD15Q9P1V8 674 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 ADAMTSL1Q8N6G6 1762 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 EP400Q96L91 3159 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 ZNF831Q5JPB2 1677 aa12.28□□□□□ -0.44
SRP54-213ENST00000556994 SRCAPQ6ZRS2 3230 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.27□□□□□ -0.44
SRP54-213ENST00000556994 RASGRF2O14827 1237 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 ASAP2O43150 1006 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 RIPK2O43353 540 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 ECM2O94769 699 aaPredicted RBP12.27□□□□□ -0.44
SRP54-213ENST00000556994 CHRNA3P32297 505 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 DRG2P55039 364 aaKnown RBP12.27□□□□□ -0.44
SRP54-213ENST00000556994 AUHQ13825 339 aaKnown RBP12.27□□□□□ -0.44
SRP54-213ENST00000556994 PPP2R5EQ16537 467 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 LONRF1Q17RB8 773 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 ACCSLQ4AC99 568 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 OTOP1Q7RTM1 612 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 TAX1BP1Q86VP1 789 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 UBL4BQ8N7F7 174 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 LMO3Q8TAP4 145 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 CERKQ8TCT0 537 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 ZSWIM1Q9BR11 485 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 NOD2Q9HC29 1040 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 AGAP1Q9UPQ3 857 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 PCDHA3Q9Y5H8 950 aa12.27□□□□□ -0.44
SRP54-213ENST00000556994 EMSYQ7Z589 1322 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 AGTP01019 485 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 EZRP15311 586 aaKnown RBP12.27□□□□□ -0.45
SRP54-213ENST00000556994 SCP2P22307 547 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 ICA1Q05084 483 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 ADCY2Q08462 1091 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 BFSP1Q12934 665 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 KIF22Q14807 665 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 LRCH2Q5VUJ6 765 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 TRPM8Q7Z2W7 1104 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 CCDC50Q8IVM0 306 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 CCDC63Q8NA47 563 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 ZSWIM2Q8NEG5 633 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 P3H4Q92791 437 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 CCDC17Q96LX7 622 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 PCDHB18PQ96TA0 734 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 DDX23Q9BUQ8 820 aaKnown RBP12.27□□□□□ -0.45
SRP54-213ENST00000556994 DNAJC17Q9NVM6 304 aaKnown RBP12.27□□□□□ -0.45
SRP54-213ENST00000556994 DMAC2Q9NW81 257 aa12.27□□□□□ -0.45
SRP54-213ENST00000556994 MTRF1LQ9UGC7 380 aaKnown RBP12.27□□□□□ -0.45
SRP54-213ENST00000556994 SYNGAP1Q96PV0 1343 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 IGLV3-22A0A075B6J6 115 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 HGSO14964 777 aaPredicted RBP12.26□□□□□ -0.45
SRP54-213ENST00000556994 SGPL1O95470 568 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 ACSL3O95573 720 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 CFBP00751 764 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 CTNNA2P26232 953 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 CIITAP33076 1130 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 GCLMP48507 274 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 PEX5P50542 639 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 CNGA2Q16280 664 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 SYDE2Q5VT97 1194 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 EXOC3L1Q86VI1 746 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 COL23A1Q86Y22 540 aaPredicted RBP12.26□□□□□ -0.45
SRP54-213ENST00000556994 RHOT2Q8IXI1 618 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 MKL1Q969V6 931 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 MKNK1Q9BUB5 465 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 ZC3H12CQ9C0D7 883 aaKnown RBP12.26□□□□□ -0.45
SRP54-213ENST00000556994 PCYOX1Q9UHG3 505 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 SLC12A4Q9UP95 1085 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 L3MBTL1Q9Y468 752 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 PODXLO00592 558 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 NDUFB10O96000 172 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 FOSP01100 380 aaPredicted RBP12.26□□□□□ -0.45
SRP54-213ENST00000556994 RARAP10276 462 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 RBM5P52756 815 aaKnown RBP eCLIP12.26□□□□□ -0.45
SRP54-213ENST00000556994 GPC5P78333 572 aa12.26□□□□□ -0.45
SRP54-213ENST00000556994 PPP3CAQ08209 521 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms