RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 CCDC51Q96ER9 411 aa25.18■■□□□ 1.62
TMEM260-214ENST00000556975 TBC1D13Q9NVG8 400 aa25.18■■□□□ 1.62
TMEM260-214ENST00000556975 CNTNAP2Q9UHC6 1331 aa25.17■■□□□ 1.62
TMEM260-214ENST00000556975 TSPAN1O60635 241 aa25.17■■□□□ 1.62
TMEM260-214ENST00000556975 USO1O60763 962 aaKnown RBP25.17■■□□□ 1.62
TMEM260-214ENST00000556975 CD2BP2O95400 341 aaKnown RBP25.17■■□□□ 1.62
TMEM260-214ENST00000556975 NCLP19338 710 aaKnown RBP25.17■■□□□ 1.62
TMEM260-214ENST00000556975 MBTD1Q05BQ5 628 aa25.17■■□□□ 1.62
TMEM260-214ENST00000556975 NCBP1Q09161 790 aaKnown RBP25.17■■□□□ 1.62
TMEM260-214ENST00000556975 COASYQ13057 564 aa25.17■■□□□ 1.62
TMEM260-214ENST00000556975 AMHR2Q16671 573 aa25.17■■□□□ 1.62
TMEM260-214ENST00000556975 HAUS3Q68CZ6 603 aa25.17■■□□□ 1.62
TMEM260-214ENST00000556975 TBC1D32Q96NH3 1257 aa25.17■■□□□ 1.62
TMEM260-214ENST00000556975 TCF25Q9BQ70 676 aa25.17■■□□□ 1.62
TMEM260-214ENST00000556975 POLR3FQ9H1D9 316 aaPredicted RBP25.17■■□□□ 1.62
TMEM260-214ENST00000556975 EPHX3Q9H6B9 360 aa25.17■■□□□ 1.62
TMEM260-214ENST00000556975 NRDE2Q9H7Z3 1164 aa25.17■■□□□ 1.62
TMEM260-214ENST00000556975 INO80B-WBP1J3KQ70 363 aa25.16■■□□□ 1.62
TMEM260-214ENST00000556975 PER2O15055 1255 aa25.16■■□□□ 1.62
TMEM260-214ENST00000556975 KCNC3Q14003 757 aa25.16■■□□□ 1.62
TMEM260-214ENST00000556975 NBR1Q14596 966 aa25.16■■□□□ 1.62
TMEM260-214ENST00000556975 NOTUMQ6P988 496 aa25.16■■□□□ 1.62
TMEM260-214ENST00000556975 TMEM184AQ6ZMB5 413 aa25.16■■□□□ 1.62
TMEM260-214ENST00000556975 RSAD1Q9HA92 442 aa25.16■■□□□ 1.62
TMEM260-214ENST00000556975 UBN1Q9NPG3 1134 aa25.16■■□□□ 1.62
TMEM260-214ENST00000556975 KANSL3Q9P2N6 904 aa25.16■■□□□ 1.62
TMEM260-214ENST00000556975 PCDHB6Q9Y5E3 794 aa25.16■■□□□ 1.62
TMEM260-214ENST00000556975 STK24Q9Y6E0 443 aa25.16■■□□□ 1.62
TMEM260-214ENST00000556975 C19orf67A6NJJ6 358 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 NT5C1B-RDH14C9J2C7 533 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 LAD1O00515 517 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 GALTP07902 379 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 ZP2Q05996 745 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 PTGDRQ13258 359 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 CLUL1Q15846 466 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 PLPP4Q5VZY2 271 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 POTEGQ6S5H5 508 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 TMC7Q7Z402 723 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 ADHFE1Q8IWW8 467 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 IGSF22Q8N9C0 903 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 SMRP1Q8NCR6 262 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 SMG8Q8ND04 991 aaKnown RBP25.15■■□□□ 1.62
TMEM260-214ENST00000556975 KHSRPQ92945 711 aaKnown RBP eCLIP25.15■■□□□ 1.62
TMEM260-214ENST00000556975 TMEM169Q96HH4 297 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 CSRNP2Q9H175 543 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 ENTPD7Q9NQZ7 604 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 LRWD1Q9UFC0 647 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 INPP5FQ9Y2H2 1132 aa25.15■■□□□ 1.62
TMEM260-214ENST00000556975 ZC3H11AO75152 810 aaKnown RBP eCLIP25.14■■□□□ 1.62
TMEM260-214ENST00000556975 CYP11B2P19099 503 aa25.14■■□□□ 1.62
TMEM260-214ENST00000556975 RNASELQ05823 741 aaKnown RBP25.14■■□□□ 1.62
TMEM260-214ENST00000556975 MRPL43Q8N983 215 aaKnown RBP25.14■■□□□ 1.62
TMEM260-214ENST00000556975 URGCPQ8TCY9 931 aa25.14■■□□□ 1.62
TMEM260-214ENST00000556975 GPRC5CQ9NQ84 441 aa25.14■■□□□ 1.62
TMEM260-214ENST00000556975 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.14■■□□□ 1.62
TMEM260-214ENST00000556975 HIDE1A8MVS5 230 aa25.13■■□□□ 1.61
TMEM260-214ENST00000556975 PI4K2BG5E9Z4 385 aa25.13■■□□□ 1.61
TMEM260-214ENST00000556975 INPPL1O15357 1258 aa25.13■■□□□ 1.61
TMEM260-214ENST00000556975 ARF4P18085 180 aaPredicted RBP25.13■■□□□ 1.61
TMEM260-214ENST00000556975 PRPHP41219 470 aa25.13■■□□□ 1.61
TMEM260-214ENST00000556975 ECM1Q16610 540 aa25.13■■□□□ 1.61
TMEM260-214ENST00000556975 PADI6Q6TGC4 694 aa25.13■■□□□ 1.61
TMEM260-214ENST00000556975 MAEAQ7L5Y9 396 aa25.13■■□□□ 1.61
TMEM260-214ENST00000556975 VN1R2Q8NFZ6 395 aa25.13■■□□□ 1.61
TMEM260-214ENST00000556975 IGSF21Q96ID5 467 aa25.13■■□□□ 1.61
TMEM260-214ENST00000556975 CPB2Q96IY4 423 aa25.13■■□□□ 1.61
TMEM260-214ENST00000556975 EIF2AQ9BY44 585 aaKnown RBP25.13■■□□□ 1.61
TMEM260-214ENST00000556975 RAB34Q9BZG1 259 aa25.13■■□□□ 1.61
TMEM260-214ENST00000556975 BARX2Q9UMQ3 279 aaPredicted RBP25.13■■□□□ 1.61
TMEM260-214ENST00000556975 IPPQ9Y573 584 aa25.13■■□□□ 1.61
TMEM260-214ENST00000556975 ARHGEF35A5YM69 484 aa25.12■■□□□ 1.61
TMEM260-214ENST00000556975 ITGA4P13612 1032 aa25.12■■□□□ 1.61
TMEM260-214ENST00000556975 GJB2P29033 226 aa25.12■■□□□ 1.61
TMEM260-214ENST00000556975 SSTR3P32745 418 aaPredicted RBP25.12■■□□□ 1.61
TMEM260-214ENST00000556975 CCT6AP40227 531 aaKnown RBP25.12■■□□□ 1.61
TMEM260-214ENST00000556975 AFF1P51825 1210 aaKnown RBP25.12■■□□□ 1.61
TMEM260-214ENST00000556975 SMC1AQ14683 1233 aaKnown RBP25.12■■□□□ 1.61
TMEM260-214ENST00000556975 BMS1Q14692 1282 aaKnown RBP25.12■■□□□ 1.61
TMEM260-214ENST00000556975 RILPL1Q5EBL4 403 aa25.12■■□□□ 1.61
TMEM260-214ENST00000556975 CDCA2Q69YH5 1023 aaPredicted RBP25.12■■□□□ 1.61
TMEM260-214ENST00000556975 PPP4R3CPQ6ZMV5 832 aa25.12■■□□□ 1.61
TMEM260-214ENST00000556975 DDX53Q86TM3 631 aaKnown RBP25.12■■□□□ 1.61
TMEM260-214ENST00000556975 TMEM173Q86WV6 379 aaPredicted RBP25.12■■□□□ 1.61
TMEM260-214ENST00000556975 ZNF280BQ86YH2 543 aa25.12■■□□□ 1.61
TMEM260-214ENST00000556975 PRIMPOLQ96LW4 560 aa25.12■■□□□ 1.61
TMEM260-214ENST00000556975 DNAJB4Q9UDY4 337 aa25.12■■□□□ 1.61
TMEM260-214ENST00000556975 A0A1B0GUA9 196 aa25.11■■□□□ 1.61
TMEM260-214ENST00000556975 C2orf71A6NGG8 1288 aa25.11■■□□□ 1.61
TMEM260-214ENST00000556975 DDHD2O94830 711 aa25.11■■□□□ 1.61
TMEM260-214ENST00000556975 SLC11A1P49279 550 aa25.11■■□□□ 1.61
TMEM260-214ENST00000556975 FAM187BQ17R55 369 aa25.11■■□□□ 1.61
TMEM260-214ENST00000556975 FAM122AQ96E09 287 aa25.11■■□□□ 1.61
TMEM260-214ENST00000556975 TMEM175Q9BSA9 504 aa25.11■■□□□ 1.61
TMEM260-214ENST00000556975 FZD8Q9H461 694 aa25.11■■□□□ 1.61
TMEM260-214ENST00000556975 PRMT7Q9NVM4 692 aaPredicted RBP25.11■■□□□ 1.61
TMEM260-214ENST00000556975 IRAK3Q9Y616 596 aa25.11■■□□□ 1.61
TMEM260-214ENST00000556975 C5orf42Q9H799 3197 aa25.1■■□□□ 1.61
TMEM260-214ENST00000556975 MUC6Q6W4X9 2439 aa25.1■■□□□ 1.61
TMEM260-214ENST00000556975 LRRIQ4A6NIV6 560 aa25.1■■□□□ 1.61
TMEM260-214ENST00000556975 B4GALT3O60512 393 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms