RNA–Protein interactions for RNA: ENST00000556838.5

RBM23-223, Transcript of RNA binding motif protein 23, human

TSL 2

Gene RBM23, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-223	ENST00000556838	NECAB3	Q96P71	396 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM23-223	ENST00000556838	CASD1	Q96PB1	797 aa		13.68	□□□□□ -0.22
RBM23-223	ENST00000556838	USP28	Q96RU2	1077 aa		13.68	□□□□□ -0.22
RBM23-223	ENST00000556838	PLIN2	Q99541	437 aa		13.68	□□□□□ -0.22
RBM23-223	ENST00000556838	CCSER1	Q9C0I3	900 aa		13.68	□□□□□ -0.22
RBM23-223	ENST00000556838	UBN1	Q9NPG3	1134 aa		13.68	□□□□□ -0.22
RBM23-223	ENST00000556838	TYW1	Q9NV66	732 aa	Known RBP	13.68	□□□□□ -0.22
RBM23-223	ENST00000556838	ARID2	Q68CP9	1835 aa		13.68	□□□□□ -0.22
RBM23-223	ENST00000556838	CNTNAP2	Q9UHC6	1331 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	TNFRSF10A	O00220	468 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	HIP1R	O75146	1068 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	ATF7	P17544	494 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	LAG3	P18627	525 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	GUCY2C	P25092	1073 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	NASP	P49321	788 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	SLC12A3	P55017	1021 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	MRPS5	P82675	430 aa	Known RBP	13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	GRIN1	Q05586	938 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	DMP1	Q13316	513 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	STK38	Q15208	465 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	AMHR2	Q16671	573 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	MRPL10	Q7Z7H8	261 aa	Known RBP	13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	KRI1	Q8N9T8	703 aa	Known RBP	13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	HELQ	Q8TDG4	1101 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	RUSC1	Q9BVN2	902 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	TRIM6	Q9C030	488 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	CSRNP2	Q9H175	543 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	FZD8	Q9H461	694 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	RNF19A	Q9NV58	838 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	CCDC39	Q9UFE4	941 aa		13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	FBXO2	Q9UK22	296 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	RBM19	Q9Y4C8	960 aa	Known RBP	13.67	□□□□□ -0.22
RBM23-223	ENST00000556838	LOXHD1	Q8IVV2	1947 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	ACKR2	O00590	384 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	YEATS4	O95619	227 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	F13A1	P00488	732 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	PRKCB	P05771	671 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	ARF4	P18085	180 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	NCL	P19338	710 aa	Known RBP	13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	TMEM132A	Q24JP5	1023 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	TIGD5	Q53EQ6	642 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	CLLU1OS	Q5K130	101 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	UBXN11	Q5T124	520 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	SLC27A1	Q6PCB7	646 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	LINC00301	Q8NCQ3	95 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	URGCP	Q8TCY9	931 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	BSND	Q8WZ55	320 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	CPB2	Q96IY4	423 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	CWH43	Q9H720	699 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838	PLAGL2	Q9UPG8	496 aa		13.66	□□□□□ -0.22
RBM23-223	ENST00000556838		A0A1B0GUA9	196 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	CCDC169	A6NNP5	214 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838		K7ERI5	159 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	N4BP3	O15049	544 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	SPTLC2	O15270	562 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	PPP6R2	O75170	966 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	OFD1	O75665	1012 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	ITGA4	P13612	1032 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	PLCG1	P19174	1290 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	DDIT3	P35638	169 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	PPM1A	P35813	382 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	NPTX2	P47972	431 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	KCNQ1	P51787	676 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	SMTN	P53814	917 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	PEX3	P56589	373 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	UBE3A	Q05086	875 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	PRPF4B	Q13523	1007 aa	Known RBP	13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	KARS	Q15046	597 aa	Known RBP	13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	NOMO2	Q5JPE7	1267 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	KLHL23	Q8NBE8	558 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	COLGALT1	Q8NBJ5	622 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	RAD54L	Q92698	747 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	LPP	Q93052	612 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	EPSTI1	Q96J88	318 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	ZNF558	Q96NG5	402 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	UHRF1	Q96T88	793 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	ADPGK	Q9BRR6	497 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	TMEM134	Q9H6X4	195 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	RSAD1	Q9HA92	442 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	KMT5A	Q9NQR1	393 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	KANSL3	Q9P2N6	904 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	CFAP45	Q9UL16	551 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838	ODF2L	Q9ULJ1	636 aa		13.65	□□□□□ -0.22
RBM23-223	ENST00000556838		H0YCG3	227 aa		13.64	□□□□□ -0.23
RBM23-223	ENST00000556838	GRM6	O15303	877 aa		13.64	□□□□□ -0.23
RBM23-223	ENST00000556838	B4GALT5	O43286	388 aa		13.64	□□□□□ -0.23
RBM23-223	ENST00000556838	PLS3	P13797	630 aa		13.64	□□□□□ -0.23
RBM23-223	ENST00000556838	LIG1	P18858	919 aa		13.64	□□□□□ -0.23
RBM23-223	ENST00000556838	SCP2	P22307	547 aa		13.64	□□□□□ -0.23
RBM23-223	ENST00000556838	RNASEL	Q05823	741 aa	Known RBP	13.64	□□□□□ -0.23
RBM23-223	ENST00000556838	MAPK7	Q13164	816 aa		13.64	□□□□□ -0.23
RBM23-223	ENST00000556838	LONRF3	Q496Y0	759 aa		13.64	□□□□□ -0.23
RBM23-223	ENST00000556838	RRAGB	Q5VZM2	374 aa		13.64	□□□□□ -0.23
RBM23-223	ENST00000556838	AGMO	Q6ZNB7	445 aa		13.64	□□□□□ -0.23
RBM23-223	ENST00000556838	CCDC73	Q6ZRK6	1079 aa		13.64	□□□□□ -0.23
RBM23-223	ENST00000556838	LRRC55	Q6ZSA7	311 aa		13.64	□□□□□ -0.23
RBM23-223	ENST00000556838	GPBP1	Q86WP2	473 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms