RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 AK2P54819 239 aa14.19□□□□□ -0.14
SHMT2-223ENST00000556689 NTRK3Q16288 839 aa14.19□□□□□ -0.14
SHMT2-223ENST00000556689 ELMSAN1Q6PJG2 1045 aa14.19□□□□□ -0.14
SHMT2-223ENST00000556689 B3GNT9Q6UX72 402 aa14.19□□□□□ -0.14
SHMT2-223ENST00000556689 CMASQ8NFW8 434 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-223ENST00000556689 KCNG4Q8TDN1 519 aa14.19□□□□□ -0.14
SHMT2-223ENST00000556689 STAMQ92783 540 aa14.19□□□□□ -0.14
SHMT2-223ENST00000556689 SEMA4AQ9H3S1 761 aa14.19□□□□□ -0.14
SHMT2-223ENST00000556689 RSAD1Q9HA92 442 aa14.19□□□□□ -0.14
SHMT2-223ENST00000556689 WDR6Q9NNW5 1121 aaKnown RBP14.19□□□□□ -0.14
SHMT2-223ENST00000556689 MAN1C1Q9NR34 630 aa14.19□□□□□ -0.14
SHMT2-223ENST00000556689 SH3GLB2Q9NR46 395 aa14.19□□□□□ -0.14
SHMT2-223ENST00000556689 AGPAT5Q9NUQ2 364 aa14.19□□□□□ -0.14
SHMT2-223ENST00000556689 CNTNAP2Q9UHC6 1331 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 NARSO43776 548 aaKnown RBP14.18□□□□□ -0.14
SHMT2-223ENST00000556689 POMCP01189 267 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 SOD2P04179 222 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 URODP06132 367 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 ADH1AP07327 375 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 CFHP08603 1231 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 IFNAR1P17181 557 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 RFX1P22670 979 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 GBP2P32456 591 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-223ENST00000556689 PSMC5P62195 406 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 ANO5Q75V66 913 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 SRGAP1Q7Z6B7 1085 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 EXOC8Q8IYI6 725 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 FBXL16Q8N461 479 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 SLC44A3Q8N4M1 653 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 RSAD2Q8WXG1 361 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 SLC7A3Q8WY07 619 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 NXPE3Q969Y0 559 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 RPS6KC1Q96S38 1066 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 RHOBTB2Q9BYZ6 727 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 UBN1Q9NPG3 1134 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 COL4A3BPQ9Y5P4 624 aa14.18□□□□□ -0.14
SHMT2-223ENST00000556689 KRBA1A5PL33 1030 aa14.17□□□□□ -0.14
SHMT2-223ENST00000556689 TEX28O15482 410 aa14.17□□□□□ -0.14
SHMT2-223ENST00000556689 DKC1O60832 514 aaKnown RBP eCLIP14.17□□□□□ -0.14
SHMT2-223ENST00000556689 N4BP1O75113 896 aaKnown RBP14.17□□□□□ -0.14
SHMT2-223ENST00000556689 TDP2O95551 362 aa14.17□□□□□ -0.14
SHMT2-223ENST00000556689 LMNAP02545 664 aaKnown RBP14.17□□□□□ -0.14
SHMT2-223ENST00000556689 SRGAP2CP0DJJ0 459 aa14.17□□□□□ -0.14
SHMT2-223ENST00000556689 HOXA11P31270 313 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-223ENST00000556689 PLA2G4FQ68DD2 849 aa14.17□□□□□ -0.14
SHMT2-223ENST00000556689 BLOC1S2Q6QNY1 142 aa14.17□□□□□ -0.14
SHMT2-223ENST00000556689 TAS1R1Q7RTX1 841 aa14.17□□□□□ -0.14
SHMT2-223ENST00000556689 CNNM3Q8NE01 707 aa14.17□□□□□ -0.14
SHMT2-223ENST00000556689 PRPF31Q8WWY3 499 aaKnown RBP14.17□□□□□ -0.14
SHMT2-223ENST00000556689 KCNB2Q92953 911 aa14.17□□□□□ -0.14
SHMT2-223ENST00000556689 JAKMIP1Q96N16 626 aaKnown RBP14.17□□□□□ -0.14
SHMT2-223ENST00000556689 EPS15L1Q9UBC2 864 aa14.17□□□□□ -0.14
SHMT2-223ENST00000556689 PCDHA4Q9UN74 947 aa14.17□□□□□ -0.14
SHMT2-223ENST00000556689 NID2Q14112 1375 aa14.17□□□□□ -0.14
SHMT2-223ENST00000556689 RIF1Q5UIP0 2472 aaKnown RBP14.16□□□□□ -0.14
SHMT2-223ENST00000556689 INPPL1O15357 1258 aa14.16□□□□□ -0.14
SHMT2-223ENST00000556689 GLUD1P00367 558 aa14.16□□□□□ -0.14
SHMT2-223ENST00000556689 NCLP19338 710 aaKnown RBP14.16□□□□□ -0.14
SHMT2-223ENST00000556689 OR1G1P47890 313 aa14.16□□□□□ -0.14
SHMT2-223ENST00000556689 QARSP47897 775 aaKnown RBP14.16□□□□□ -0.14
SHMT2-223ENST00000556689 NPEPPSP55786 919 aa14.16□□□□□ -0.14
SHMT2-223ENST00000556689 CCT2P78371 535 aaKnown RBP14.16□□□□□ -0.14
SHMT2-223ENST00000556689 UBXN11Q5T124 520 aa14.16□□□□□ -0.14
SHMT2-223ENST00000556689 KIAA0319Q5VV43 1072 aa14.16□□□□□ -0.14
SHMT2-223ENST00000556689 ETNPPLQ8TBG4 499 aa14.16□□□□□ -0.14
SHMT2-223ENST00000556689 PSPC1Q8WXF1 523 aaKnown RBP14.16□□□□□ -0.14
SHMT2-223ENST00000556689 CEP170P1Q96L14 293 aa14.16□□□□□ -0.14
SHMT2-223ENST00000556689 MBOAT7Q96N66 472 aa14.16□□□□□ -0.14
SHMT2-223ENST00000556689 HERC2P3Q9BVR0 1158 aa14.16□□□□□ -0.14
SHMT2-223ENST00000556689 AGXT2Q9BYV1 514 aa14.16□□□□□ -0.14
SHMT2-223ENST00000556689 MINDY3Q9H8M7 445 aa14.16□□□□□ -0.14
SHMT2-223ENST00000556689 RXFP1Q9HBX9 757 aa14.16□□□□□ -0.14
SHMT2-223ENST00000556689 PRG3Q9Y2Y8 225 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-223ENST00000556689 FAM186AA6NE01 2351 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 ASAP2O43150 1006 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 GAS2O43903 313 aaKnown RBP14.15□□□□□ -0.14
SHMT2-223ENST00000556689 NR1I2O75469 434 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 MYBP10242 640 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 SRFP11831 508 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 ITGA4P13612 1032 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 PDIA3P30101 505 aaKnown RBP14.15□□□□□ -0.14
SHMT2-223ENST00000556689 SSRP1Q08945 709 aaKnown RBP14.15□□□□□ -0.14
SHMT2-223ENST00000556689 LAMTOR4Q0VGL1 99 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 MOXD1Q6UVY6 613 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 COLGALT2Q8IYK4 626 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 TRIM22Q8IYM9 498 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 BLIDQ8IZY5 108 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 ZNF579Q8NAF0 562 aaKnown RBP14.15□□□□□ -0.14
SHMT2-223ENST00000556689 HDAC7Q8WUI4 952 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 SMG7Q92540 1137 aaKnown RBP14.15□□□□□ -0.14
SHMT2-223ENST00000556689 TMEM143Q96AN5 459 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 MYADMQ96S97 322 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 SLKQ9H2G2 1235 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-223ENST00000556689 PLEKHA4Q9H4M7 779 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 DHX33Q9H6R0 707 aaKnown RBP14.15□□□□□ -0.14
SHMT2-223ENST00000556689 PIDD1Q9HB75 910 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 NCOA5Q9HCD5 579 aaKnown RBP14.15□□□□□ -0.14
SHMT2-223ENST00000556689 MARCH5Q9NX47 278 aa14.15□□□□□ -0.14
SHMT2-223ENST00000556689 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.15□□□□□ -0.14
SHMT2-223ENST00000556689 DDX25Q9UHL0 483 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms