RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 XPNPEP1Q9NQW7 623 aa25.18■■□□□ 1.62
ACTN1-220ENST00000556433 ANKEF1Q9NU02 776 aa25.18■■□□□ 1.62
ACTN1-220ENST00000556433 DNAJB4Q9UDY4 337 aa25.18■■□□□ 1.62
ACTN1-220ENST00000556433 ATP2B1P20020 1258 aa25.17■■□□□ 1.62
ACTN1-220ENST00000556433 ST3GAL1Q11201 340 aa25.17■■□□□ 1.62
ACTN1-220ENST00000556433 DDX53Q86TM3 631 aaKnown RBP25.17■■□□□ 1.62
ACTN1-220ENST00000556433 ZNF280BQ86YH2 543 aa25.17■■□□□ 1.62
ACTN1-220ENST00000556433 RSAD1Q9HA92 442 aa25.17■■□□□ 1.62
ACTN1-220ENST00000556433 HCFC2Q9Y5Z7 792 aa25.17■■□□□ 1.62
ACTN1-220ENST00000556433 C5orf42Q9H799 3197 aa25.17■■□□□ 1.62
ACTN1-220ENST00000556433 ERLIN2O94905 339 aa25.16■■□□□ 1.62
ACTN1-220ENST00000556433 SLC11A1P49279 550 aa25.16■■□□□ 1.62
ACTN1-220ENST00000556433 PTENP60484 403 aa25.16■■□□□ 1.62
ACTN1-220ENST00000556433 GUCY1B3Q02153 619 aa25.16■■□□□ 1.62
ACTN1-220ENST00000556433 TFDP1Q14186 410 aa25.16■■□□□ 1.62
ACTN1-220ENST00000556433 SAFBQ15424 915 aaKnown RBP eCLIP25.16■■□□□ 1.62
ACTN1-220ENST00000556433 BCL7CQ8WUZ0 217 aaPredicted RBP25.16■■□□□ 1.62
ACTN1-220ENST00000556433 AUTS2Q8WXX7 1259 aa25.16■■□□□ 1.62
ACTN1-220ENST00000556433 CCDC43Q96MW1 224 aaKnown RBP25.16■■□□□ 1.62
ACTN1-220ENST00000556433 ZBP1Q9H171 429 aa25.16■■□□□ 1.62
ACTN1-220ENST00000556433 KANSL3Q9P2N6 904 aa25.16■■□□□ 1.62
ACTN1-220ENST00000556433 LIMCH1Q9UPQ0 1083 aa25.16■■□□□ 1.62
ACTN1-220ENST00000556433 CNTNAP2Q9UHC6 1331 aa25.15■■□□□ 1.62
ACTN1-220ENST00000556433 A0A087WWV3 80 aa25.15■■□□□ 1.62
ACTN1-220ENST00000556433 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.15■■□□□ 1.62
ACTN1-220ENST00000556433 DGAT1O75907 488 aa25.15■■□□□ 1.62
ACTN1-220ENST00000556433 CTSAP10619 480 aa25.15■■□□□ 1.62
ACTN1-220ENST00000556433 AFF1P51825 1210 aaKnown RBP25.15■■□□□ 1.62
ACTN1-220ENST00000556433 NCBP1Q09161 790 aaKnown RBP25.15■■□□□ 1.62
ACTN1-220ENST00000556433 TPRNQ4KMQ1 711 aa25.15■■□□□ 1.62
ACTN1-220ENST00000556433 HFE2Q6ZVN8 426 aa25.15■■□□□ 1.62
ACTN1-220ENST00000556433 CNNM3Q8NE01 707 aa25.15■■□□□ 1.62
ACTN1-220ENST00000556433 ASAP3Q8TDY4 903 aa25.15■■□□□ 1.62
ACTN1-220ENST00000556433 FAM193BQ96PV7 902 aaPredicted RBP25.15■■□□□ 1.62
ACTN1-220ENST00000556433 TMEM60Q9H2L4 133 aa25.15■■□□□ 1.62
ACTN1-220ENST00000556433 INO80B-WBP1J3KQ70 363 aa25.14■■□□□ 1.62
ACTN1-220ENST00000556433 B4GALT3O60512 393 aa25.14■■□□□ 1.62
ACTN1-220ENST00000556433 DDHD2O94830 711 aa25.14■■□□□ 1.62
ACTN1-220ENST00000556433 ALDH2P05091 517 aa25.14■■□□□ 1.62
ACTN1-220ENST00000556433 NCLP19338 710 aaKnown RBP25.14■■□□□ 1.62
ACTN1-220ENST00000556433 AXLP30530 894 aa25.14■■□□□ 1.62
ACTN1-220ENST00000556433 POU5F1BQ06416 359 aa25.14■■□□□ 1.62
ACTN1-220ENST00000556433 GIT2Q14161 759 aa25.14■■□□□ 1.62
ACTN1-220ENST00000556433 PCBP1Q15365 356 aaKnown RBP eCLIP25.14■■□□□ 1.62
ACTN1-220ENST00000556433 PIGOQ8TEQ8 1089 aa25.14■■□□□ 1.62
ACTN1-220ENST00000556433 UBN1Q9NPG3 1134 aa25.14■■□□□ 1.62
ACTN1-220ENST00000556433 TSPAN1O60635 241 aa25.13■■□□□ 1.61
ACTN1-220ENST00000556433 POMCP01189 267 aa25.13■■□□□ 1.61
ACTN1-220ENST00000556433 XRCC6P12956 609 aaKnown RBP eCLIP25.13■■□□□ 1.61
ACTN1-220ENST00000556433 ITGA4P13612 1032 aa25.13■■□□□ 1.61
ACTN1-220ENST00000556433 MCM7P33993 719 aa25.13■■□□□ 1.61
ACTN1-220ENST00000556433 ARL2P36404 184 aa25.13■■□□□ 1.61
ACTN1-220ENST00000556433 RARRES1P49788 294 aa25.13■■□□□ 1.61
ACTN1-220ENST00000556433 ZXDAP98168 799 aa25.13■■□□□ 1.61
ACTN1-220ENST00000556433 CES5AQ6NT32 575 aa25.13■■□□□ 1.61
ACTN1-220ENST00000556433 IFNLR1Q8IU57 520 aaPredicted RBP25.13■■□□□ 1.61
ACTN1-220ENST00000556433 CCDC83Q8IWF9 413 aa25.13■■□□□ 1.61
ACTN1-220ENST00000556433 SMG8Q8ND04 991 aaKnown RBP25.13■■□□□ 1.61
ACTN1-220ENST00000556433 CPB2Q96IY4 423 aa25.13■■□□□ 1.61
ACTN1-220ENST00000556433 MFSD14AQ96MC6 490 aa25.13■■□□□ 1.61
ACTN1-220ENST00000556433 EIF2AQ9BY44 585 aaKnown RBP25.13■■□□□ 1.61
ACTN1-220ENST00000556433 ADAM7Q9H2U9 754 aa25.13■■□□□ 1.61
ACTN1-220ENST00000556433 FAN1Q9Y2M0 1017 aa25.13■■□□□ 1.61
ACTN1-220ENST00000556433 IRAK3Q9Y616 596 aa25.13■■□□□ 1.61
ACTN1-220ENST00000556433 POTEMA6NI47 508 aa25.12■■□□□ 1.61
ACTN1-220ENST00000556433 CAPSQ13938 189 aa25.12■■□□□ 1.61
ACTN1-220ENST00000556433 NOTUMQ6P988 496 aa25.12■■□□□ 1.61
ACTN1-220ENST00000556433 TRIM67Q6ZTA4 783 aa25.12■■□□□ 1.61
ACTN1-220ENST00000556433 CCDC51Q96ER9 411 aa25.12■■□□□ 1.61
ACTN1-220ENST00000556433 C8orf76Q96K31 380 aa25.12■■□□□ 1.61
ACTN1-220ENST00000556433 TMEM175Q9BSA9 504 aa25.12■■□□□ 1.61
ACTN1-220ENST00000556433 VN1R3Q9BXE9 311 aa25.12■■□□□ 1.61
ACTN1-220ENST00000556433 CDH22Q9UJ99 828 aa25.12■■□□□ 1.61
ACTN1-220ENST00000556433 IPPQ9Y573 584 aa25.12■■□□□ 1.61
ACTN1-220ENST00000556433 GLRA2P23416 452 aa25.11■■□□□ 1.61
ACTN1-220ENST00000556433 MBTD1Q05BQ5 628 aa25.11■■□□□ 1.61
ACTN1-220ENST00000556433 ITIH3Q06033 890 aa25.11■■□□□ 1.61
ACTN1-220ENST00000556433 LLPHQ9BRT6 129 aaKnown RBP25.11■■□□□ 1.61
ACTN1-220ENST00000556433 CSRNP2Q9H175 543 aa25.11■■□□□ 1.61
ACTN1-220ENST00000556433 RNF39Q9H2S5 420 aa25.11■■□□□ 1.61
ACTN1-220ENST00000556433 TECTAO75443 2155 aa25.1■■□□□ 1.61
ACTN1-220ENST00000556433 TMEM221A6NGB7 291 aa25.1■■□□□ 1.61
ACTN1-220ENST00000556433 M0R296 226 aa25.1■■□□□ 1.61
ACTN1-220ENST00000556433 NRP1O14786 923 aa25.1■■□□□ 1.61
ACTN1-220ENST00000556433 USO1O60763 962 aaKnown RBP25.1■■□□□ 1.61
ACTN1-220ENST00000556433 SPATA31C1P0DKV0 1188 aa25.1■■□□□ 1.61
ACTN1-220ENST00000556433 SP100P23497 879 aaPredicted RBP25.1■■□□□ 1.61
ACTN1-220ENST00000556433 ZNF174Q15697 407 aa25.1■■□□□ 1.61
ACTN1-220ENST00000556433 MAEAQ7L5Y9 396 aa25.1■■□□□ 1.61
ACTN1-220ENST00000556433 CATSPER3Q86XQ3 398 aa25.1■■□□□ 1.61
ACTN1-220ENST00000556433 C12orf76Q8N812 135 aaPredicted RBP25.1■■□□□ 1.61
ACTN1-220ENST00000556433 SLC22A17Q8WUG5 538 aa25.1■■□□□ 1.61
ACTN1-220ENST00000556433 NECTIN4Q96NY8 510 aa25.1■■□□□ 1.61
ACTN1-220ENST00000556433 POLR3FQ9H1D9 316 aaPredicted RBP25.1■■□□□ 1.61
ACTN1-220ENST00000556433 STK39Q9UEW8 545 aa25.1■■□□□ 1.61
ACTN1-220ENST00000556433 HES2Q9Y543 173 aa25.1■■□□□ 1.61
ACTN1-220ENST00000556433 SSBP05455 408 aaKnown RBP eCLIP25.09■■□□□ 1.61
ACTN1-220ENST00000556433 EPCAMP16422 314 aa25.09■■□□□ 1.61
ACTN1-220ENST00000556433 PTPN14Q15678 1187 aa25.09■■□□□ 1.61
ACTN1-220ENST00000556433 AMHR2Q16671 573 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms