RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 TGFB2P61812 414 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 DDB1Q16531 1140 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 CCDC178Q5BJE1 867 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 FNDC7Q5VTL7 733 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 MDGA1Q8NFP4 955 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 ATXN2LQ8WWM7 1075 aaKnown RBP7.21□□□□□ -1.26
PRPF39-209ENST00000556353 SLC5A5Q92911 643 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 EMC7Q9NPA0 242 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 MAPRE3Q9UPY8 281 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 NUMBLQ9Y6R0 609 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 A0A087X0B3 334 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 PRSS38A1L453 326 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 KDM1AO60341 852 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 SEC24DO94855 1032 aaPredicted RBP7.2□□□□□ -1.26
PRPF39-209ENST00000556353 NRG3P56975 720 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 TOB2Q14106 344 aaPredicted RBP7.2□□□□□ -1.26
PRPF39-209ENST00000556353 BROXQ5VW32 411 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 LMBR1LQ6UX01 489 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 APBB1IPQ7Z5R6 666 aaPredicted RBP7.2□□□□□ -1.26
PRPF39-209ENST00000556353 AMER2Q8N7J2 671 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 NEU4Q8WWR8 484 aaPredicted RBP7.2□□□□□ -1.26
PRPF39-209ENST00000556353 ST8SIA2Q92186 375 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 MNTQ99583 582 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 FDXACB1Q9BRP7 624 aaPredicted RBP7.2□□□□□ -1.26
PRPF39-209ENST00000556353 ANO3Q9BYT9 981 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 TRIM8Q9BZR9 551 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 WNT8AQ9H1J5 351 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 EPC1Q9H2F5 836 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 PPP2R3BQ9Y5P8 575 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 XDHP47989 1333 aa7.2□□□□□ -1.26
PRPF39-209ENST00000556353 STC2O76061 302 aa7.19□□□□□ -1.26
PRPF39-209ENST00000556353 MANFP55145 182 aaKnown RBP7.19□□□□□ -1.26
PRPF39-209ENST00000556353 PPARAQ07869 468 aa7.19□□□□□ -1.26
PRPF39-209ENST00000556353 ATP13A4Q4VNC1 1196 aa7.19□□□□□ -1.26
PRPF39-209ENST00000556353 PLEKHG4Q58EX7 1191 aa7.19□□□□□ -1.26
PRPF39-209ENST00000556353 GLB1L2Q8IW92 636 aa7.19□□□□□ -1.26
PRPF39-209ENST00000556353 OR5M3Q8NGP4 307 aa7.19□□□□□ -1.26
PRPF39-209ENST00000556353 RSAD2Q8WXG1 361 aa7.19□□□□□ -1.26
PRPF39-209ENST00000556353 PGBD4Q96DM1 585 aa7.19□□□□□ -1.26
PRPF39-209ENST00000556353 SLITRK6Q9H5Y7 841 aa7.19□□□□□ -1.26
PRPF39-209ENST00000556353 SLC2A4RGQ9NR83 387 aa7.19□□□□□ -1.26
PRPF39-209ENST00000556353 KLRG2A4D1S0 409 aaPredicted RBP7.18□□□□□ -1.26
PRPF39-209ENST00000556353 SLC25A3Q00325 362 aa7.18□□□□□ -1.26
PRPF39-209ENST00000556353 MGAT5Q09328 741 aa7.18□□□□□ -1.26
PRPF39-209ENST00000556353 HTR3DQ70Z44 454 aa7.18□□□□□ -1.26
PRPF39-209ENST00000556353 TAS1R1Q7RTX1 841 aa7.18□□□□□ -1.26
PRPF39-209ENST00000556353 USP7Q93009 1102 aa7.18□□□□□ -1.26
PRPF39-209ENST00000556353 CLIP3Q96DZ5 547 aa7.18□□□□□ -1.26
PRPF39-209ENST00000556353 NOC2LQ9Y3T9 749 aaKnown RBP7.18□□□□□ -1.26
PRPF39-209ENST00000556353 TBX22Q9Y458 520 aa7.18□□□□□ -1.26
PRPF39-209ENST00000556353 SHROOM4Q9ULL8 1493 aa7.17□□□□□ -1.26
PRPF39-209ENST00000556353 HOXA3O43365 443 aaPredicted RBP7.17□□□□□ -1.26
PRPF39-209ENST00000556353 CASRP41180 1078 aa7.17□□□□□ -1.26
PRPF39-209ENST00000556353 DHCR24Q15392 516 aa7.17□□□□□ -1.26
PRPF39-209ENST00000556353 FAM214AQ32MH5 1076 aa7.17□□□□□ -1.26
PRPF39-209ENST00000556353 DCAF17Q5H9S7 520 aaPredicted RBP7.17□□□□□ -1.26
PRPF39-209ENST00000556353 C1QL3Q5VWW1 255 aa7.17□□□□□ -1.26
PRPF39-209ENST00000556353 CCDC62Q6P9F0 684 aa7.17□□□□□ -1.26
PRPF39-209ENST00000556353 RASSF3Q86WH2 238 aa7.17□□□□□ -1.26
PRPF39-209ENST00000556353 ENKD1Q9H0I2 346 aa7.17□□□□□ -1.26
PRPF39-209ENST00000556353 PRSS50Q9UI38 385 aa7.17□□□□□ -1.26
PRPF39-209ENST00000556353 TMPRSS11EQ9UL52 423 aa7.17□□□□□ -1.26
PRPF39-209ENST00000556353 WDR33Q9C0J8 1336 aaKnown RBP7.17□□□□□ -1.26
PRPF39-209ENST00000556353 CC2D2AQ9P2K1 1620 aa7.16□□□□□ -1.26
PRPF39-209ENST00000556353 A0A1W2PR48 441 aa7.16□□□□□ -1.26
PRPF39-209ENST00000556353 FAM20BO75063 409 aa7.16□□□□□ -1.26
PRPF39-209ENST00000556353 CLEC2LP0C7M8 214 aa7.16□□□□□ -1.26
PRPF39-209ENST00000556353 BPIP17213 487 aa7.16□□□□□ -1.26
PRPF39-209ENST00000556353 HK1P19367 917 aa7.16□□□□□ -1.26
PRPF39-209ENST00000556353 GYS2P54840 703 aa7.16□□□□□ -1.26
PRPF39-209ENST00000556353 DUSP2Q05923 314 aa7.16□□□□□ -1.26
PRPF39-209ENST00000556353 DPTQ07507 201 aa7.16□□□□□ -1.26
PRPF39-209ENST00000556353 RABL3Q5HYI8 236 aa7.16□□□□□ -1.26
PRPF39-209ENST00000556353 NAIF1Q69YI7 327 aaPredicted RBP7.16□□□□□ -1.26
PRPF39-209ENST00000556353 OR14C36Q8NHC7 312 aa7.16□□□□□ -1.26
PRPF39-209ENST00000556353 IL17RAQ96F46 866 aa7.16□□□□□ -1.26
PRPF39-209ENST00000556353 CPPED1Q9BRF8 314 aaPredicted RBP7.16□□□□□ -1.26
PRPF39-209ENST00000556353 MENTQ9BUN1 341 aa7.16□□□□□ -1.26
PRPF39-209ENST00000556353 WNT3AP56704 352 aa7.15□□□□□ -1.26
PRPF39-209ENST00000556353 DDX46Q7L014 1031 aaKnown RBP7.15□□□□□ -1.26
PRPF39-209ENST00000556353 MSL3Q8N5Y2 521 aaKnown RBP7.15□□□□□ -1.26
PRPF39-209ENST00000556353 LARP4BQ92615 738 aaKnown RBP7.15□□□□□ -1.26
PRPF39-209ENST00000556353 CHFRQ96EP1 664 aa7.15□□□□□ -1.26
PRPF39-209ENST00000556353 PDCD2LQ9BRP1 358 aa7.15□□□□□ -1.26
PRPF39-209ENST00000556353 IFT22Q9H7X7 185 aa7.15□□□□□ -1.26
PRPF39-209ENST00000556353 USP35Q9P2H5 1018 aa7.15□□□□□ -1.26
PRPF39-209ENST00000556353 EVLQ9UI08 416 aaPredicted RBP7.15□□□□□ -1.26
PRPF39-209ENST00000556353 EIF4G1Q04637 1599 aaKnown RBP7.15□□□□□ -1.27
PRPF39-209ENST00000556353 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.14□□□□□ -1.27
PRPF39-209ENST00000556353 RPS6KA4O75676 772 aa7.14□□□□□ -1.27
PRPF39-209ENST00000556353 CFBP00751 764 aa7.14□□□□□ -1.27
PRPF39-209ENST00000556353 PTGS2P35354 604 aa7.14□□□□□ -1.27
PRPF39-209ENST00000556353 GZMKP49863 264 aa7.14□□□□□ -1.27
PRPF39-209ENST00000556353 INHBCP55103 352 aa7.14□□□□□ -1.27
PRPF39-209ENST00000556353 MRPL49Q13405 166 aaKnown RBP7.14□□□□□ -1.27
PRPF39-209ENST00000556353 RNF180Q86T96 592 aa7.14□□□□□ -1.27
PRPF39-209ENST00000556353 FAM83AQ86UY5 434 aa7.14□□□□□ -1.27
PRPF39-209ENST00000556353 LYSMD2Q8IV50 215 aa7.14□□□□□ -1.27
PRPF39-209ENST00000556353 GLB1L3Q8NCI6 653 aaPredicted RBP7.14□□□□□ -1.27
PRPF39-209ENST00000556353 SLC25A43Q8WUT9 341 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms