RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 NOVA2Q9UNW9 492 aaKnown RBP7.98□□□□□ -1.13
ATXN3-236ENST00000556220 NR2E1Q9Y466 385 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 TTC3P53804 2025 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 ORC4O43929 436 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 LMNAP02545 664 aaKnown RBP7.97□□□□□ -1.13
ATXN3-236ENST00000556220 FGRP09769 529 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 SNHG28P0DPA3 235 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 GHRP10912 638 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 SP100P23497 879 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-236ENST00000556220 NRLP54845 237 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 UBE3AQ05086 875 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 KCNC3Q14003 757 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 LPIN1Q14693 890 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 PRSS36Q5K4E3 855 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 ANKRD54Q6NXT1 300 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 SYCE2Q6PIF2 218 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 WFDC8Q8IUA0 241 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 KIAA2013Q8IYS2 634 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 KCNG4Q8TDN1 519 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 USP26Q9BXU7 913 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 MFSD1Q9H3U5 465 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 MLXIPQ9HAP2 919 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 PXMP2Q9NR77 195 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 ECHDC1Q9NTX5 307 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 TCP11L1Q9NUJ3 509 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 DLL3Q9NYJ7 618 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 CHD6Q8TD26 2715 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 ABCB11O95342 1321 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 BAHCC1Q9P281 2608 aa7.97□□□□□ -1.13
ATXN3-236ENST00000556220 LGALS2P05162 132 aa7.96□□□□□ -1.14
ATXN3-236ENST00000556220 SRGAP2BP0DMP2 458 aa7.96□□□□□ -1.14
ATXN3-236ENST00000556220 HSPD1P10809 573 aaKnown RBP7.96□□□□□ -1.14
ATXN3-236ENST00000556220 HOXB8P17481 243 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-236ENST00000556220 UBA1P22314 1058 aaKnown RBP7.96□□□□□ -1.14
ATXN3-236ENST00000556220 TECP42680 631 aa7.96□□□□□ -1.14
ATXN3-236ENST00000556220 MGAT3Q09327 533 aa7.96□□□□□ -1.14
ATXN3-236ENST00000556220 ELOAQ14241 798 aaKnown RBP7.96□□□□□ -1.14
ATXN3-236ENST00000556220 ANGPT1Q15389 498 aa7.96□□□□□ -1.14
ATXN3-236ENST00000556220 PDE12Q6L8Q7 609 aaKnown RBP7.96□□□□□ -1.14
ATXN3-236ENST00000556220 RTN4RL1Q86UN2 441 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-236ENST00000556220 VSIG10LQ86VR7 867 aa7.96□□□□□ -1.14
ATXN3-236ENST00000556220 TREML1Q86YW5 311 aa7.96□□□□□ -1.14
ATXN3-236ENST00000556220 NPAS4Q8IUM7 802 aa7.96□□□□□ -1.14
ATXN3-236ENST00000556220 RASGRP4Q8TDF6 673 aa7.96□□□□□ -1.14
ATXN3-236ENST00000556220 SEC62Q99442 399 aaKnown RBP7.96□□□□□ -1.14
ATXN3-236ENST00000556220 SSBP4Q9BWG4 385 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-236ENST00000556220 UBA5Q9GZZ9 404 aa7.96□□□□□ -1.14
ATXN3-236ENST00000556220 SMOC2Q9H3U7 446 aa7.96□□□□□ -1.14
ATXN3-236ENST00000556220 ANAPC4Q9UJX5 808 aa7.96□□□□□ -1.14
ATXN3-236ENST00000556220 MRPL11Q9Y3B7 192 aaKnown RBP7.96□□□□□ -1.14
ATXN3-236ENST00000556220 MAP1BP46821 2468 aaKnown RBP7.95□□□□□ -1.14
ATXN3-236ENST00000556220 C2CD4DB7Z1M9 353 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 FSCN2O14926 492 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 PI15O43692 258 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 SMARCA5O60264 1052 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-236ENST00000556220 XYLBO75191 536 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 STAG3L1P0CL83 205 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 MYCLP12524 364 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-236ENST00000556220 AOC1P19801 751 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 ERVFC1P60507 584 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 ARHGAP4P98171 946 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 CDC37Q16543 378 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-236ENST00000556220 PAN2Q504Q3 1202 aaKnown RBP7.95□□□□□ -1.14
ATXN3-236ENST00000556220 FBXO47Q5MNV8 452 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 COX20Q5RI15 118 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 GPATCH4Q5T3I0 446 aaKnown RBP7.95□□□□□ -1.14
ATXN3-236ENST00000556220 TAF2Q6P1X5 1199 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 IGF2-ASQ6U949 168 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 CCDC105Q8IYK2 499 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 DTWD2Q8NBA8 298 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 FLCNQ8NFG4 579 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 PANK1Q8TE04 598 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 LINC01599Q8WXQ3 324 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 TTC14Q96N46 770 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 NECTIN4Q96NY8 510 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 PDCD2LQ9BRP1 358 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 APOL5Q9BWW9 433 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 LRRCC1Q9C099 1032 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 BCAS3Q9H6U6 928 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 PCDHB12Q9Y5F1 795 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 RALGAPA2Q2PPJ7 1873 aa7.95□□□□□ -1.14
ATXN3-236ENST00000556220 NLRC5Q86WI3 1866 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 ATG2AQ2TAZ0 1938 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 FRYLO94915 3013 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 NOP56O00567 594 aaKnown RBP7.94□□□□□ -1.14
ATXN3-236ENST00000556220 FOXP2O15409 715 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 CFBP00751 764 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 ASGR2P07307 311 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 GOLGA8HP0CJ92 632 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 NPR3P17342 541 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 PLAURQ03405 335 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 FOXD4L6Q3SYB3 417 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-236ENST00000556220 CWF19L1Q69YN2 538 aaKnown RBP7.94□□□□□ -1.14
ATXN3-236ENST00000556220 FOXD4L3Q6VB84 417 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-236ENST00000556220 RUFY4Q6ZNE9 571 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 TSHZ1Q6ZSZ6 1077 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 STOX1Q6ZVD7 989 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 RSPH3Q86UC2 560 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 RGL4Q8IZJ4 473 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 CMTR1Q8N1G2 835 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms