RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 ITIH3Q06033 890 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 SMC1AQ14683 1233 aaKnown RBP6.6□□□□□ -1.35
PRKCH-220ENST00000556164 ZNF484Q5JVG2 852 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 RARS2Q5T160 578 aaKnown RBP6.6□□□□□ -1.35
PRKCH-220ENST00000556164 WWC2Q6AWC2 1192 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 MIS18BP1Q6P0N0 1132 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 ABHD15Q6UXT9 468 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 LRRC55Q6ZSA7 311 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 TMTC3Q6ZXV5 915 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 MICU3Q86XE3 530 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 TMTC2Q8N394 836 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 TDRD5Q8NAT2 981 aaKnown RBP6.6□□□□□ -1.35
PRKCH-220ENST00000556164 RNF169Q8NCN4 708 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 TMEM87BQ96K49 555 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 NECTIN4Q96NY8 510 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 CASD1Q96PB1 797 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 MTA3Q9BTC8 594 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 LRRC2Q9BYS8 371 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 ADAM7Q9H2U9 754 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 ELAC1Q9H777 363 aaKnown RBP6.6□□□□□ -1.35
PRKCH-220ENST00000556164 RIC8AQ9NPQ8 531 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 RNF19AQ9NV58 838 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 SPG21Q9NZD8 308 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 TCEAL9Q9UHQ7 104 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 KIAA1024Q9UPX6 916 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 AKT3Q9Y243 479 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 INPP5FQ9Y2H2 1132 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 HCFC2Q9Y5Z7 792 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 SLC12A7Q9Y666 1083 aa6.6□□□□□ -1.35
PRKCH-220ENST00000556164 CNTNAP5Q8WYK1 1306 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 SPTBN4Q9H254 2564 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.59□□□□□ -1.35
PRKCH-220ENST00000556164 C2orf71A6NGG8 1288 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 ZBTB42B2RXF5 422 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 M0R2N6 131 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 MEIS1O00470 390 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 CLASP2O75122 1294 aaKnown RBP6.59□□□□□ -1.35
PRKCH-220ENST00000556164 GPR32O75388 356 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 FOSP01100 380 aaPredicted RBP6.59□□□□□ -1.35
PRKCH-220ENST00000556164 ZSCAN20P17040 1043 aaPredicted RBP6.59□□□□□ -1.35
PRKCH-220ENST00000556164 ATP4AP20648 1035 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 NBL1P41271 181 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 LIFRP42702 1097 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 MTHFRP42898 656 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 METAP2P50579 478 aaKnown RBP eCLIP6.59□□□□□ -1.35
PRKCH-220ENST00000556164 CLCN3P51790 818 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 ADCY7P51828 1080 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 NLRP11P59045 1033 aaKnown RBP6.59□□□□□ -1.35
PRKCH-220ENST00000556164 FAM189BP81408 668 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 PTK2Q05397 1052 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 BMS1Q14692 1282 aaKnown RBP6.59□□□□□ -1.35
PRKCH-220ENST00000556164 CLLU1OSQ5K130 101 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 MCTP2Q6DN12 878 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 ASTLQ6HA08 431 aaPredicted RBP6.59□□□□□ -1.35
PRKCH-220ENST00000556164 SWSAP1Q6NVH7 229 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 FRMD5Q7Z6J6 570 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 PLA2G4DQ86XP0 818 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 ECHDC2Q86YB7 292 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 SLC39A11Q8N1S5 342 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 C12orf76Q8N812 135 aaPredicted RBP6.59□□□□□ -1.35
PRKCH-220ENST00000556164 FANCBQ8NB91 859 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 FLCNQ8NFG4 579 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 EXOC6Q8TAG9 804 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 MAP4K1Q92918 833 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 NKD2Q969F2 451 aaPredicted RBP6.59□□□□□ -1.35
PRKCH-220ENST00000556164 ALKBH8Q96BT7 664 aaKnown RBP6.59□□□□□ -1.35
PRKCH-220ENST00000556164 MRFAP1L1Q96HT8 127 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 ZNF668Q96K58 619 aaPredicted RBP6.59□□□□□ -1.35
PRKCH-220ENST00000556164 SCLT1Q96NL6 688 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 MAP7D2Q96T17 732 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 PCDH12Q9NPG4 1184 aa6.59□□□□□ -1.35
PRKCH-220ENST00000556164 DBR1Q9UK59 544 aaKnown RBP6.59□□□□□ -1.35
PRKCH-220ENST00000556164 RIF1Q5UIP0 2472 aaKnown RBP6.59□□□□□ -1.35
PRKCH-220ENST00000556164 MYO15AQ9UKN7 3530 aa6.59□□□□□ -1.36
PRKCH-220ENST00000556164 SMCO2A6NFE2 343 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 NT5C1B-RDH14C9J2C7 533 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 FAM86B1E9PN63 330 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 IPO5O00410 1097 aaKnown RBP6.58□□□□□ -1.36
PRKCH-220ENST00000556164 ATMINO43313 823 aaPredicted RBP6.58□□□□□ -1.36
PRKCH-220ENST00000556164 CXCL14O95715 111 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 F12P00748 615 aaPredicted RBP6.58□□□□□ -1.36
PRKCH-220ENST00000556164 FAM86B2P0C5J1 330 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 SREBF1P36956 1147 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 ALDH7A1P49419 539 aaKnown RBP6.58□□□□□ -1.36
PRKCH-220ENST00000556164 BCAR1P56945 870 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 EHHADHQ08426 723 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 FUT2Q10981 343 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 AP3B2Q13367 1082 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 COL9A3Q14050 684 aaPredicted RBP6.58□□□□□ -1.36
PRKCH-220ENST00000556164 ATAT1Q5SQI0 421 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 JAKMIP3Q5VZ66 844 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 KIAA1841Q6NSI8 718 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 EFCAB12Q6NXP0 572 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 KANK3Q6NY19 840 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 SYNE3Q6ZMZ3 975 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 NIPA1Q7RTP0 329 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 ADSSL1Q8N142 457 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 VPS52Q8N1B4 723 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 LRRC71Q8N4P6 559 aa6.58□□□□□ -1.36
PRKCH-220ENST00000556164 MRPL43Q8N983 215 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms